RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 H0YGX0 51 aa1.05□□□□□ -2.24
MCF2-207ENST00000483690 SPINK4O60575 86 aa1.05□□□□□ -2.24
MCF2-207ENST00000483690 RPL38P63173 70 aaKnown RBP1.05□□□□□ -2.24
MCF2-207ENST00000483690 SMIM11BQ8TCY0 68 aa1.05□□□□□ -2.24
MCF2-207ENST00000483690 FAT2Q9NYQ8 4349 aa1.05□□□□□ -2.24
MCF2-207ENST00000483690 DNAH5Q8TE73 4624 aa1.05□□□□□ -2.24
MCF2-207ENST00000483690 DNAH8Q96JB1 4490 aa1.04□□□□□ -2.24
MCF2-207ENST00000483690 CPSF4LA6NMK7 179 aaKnown RBP1.04□□□□□ -2.24
MCF2-207ENST00000483690 G3V318 75 aa1.04□□□□□ -2.24
MCF2-207ENST00000483690 HAMPP81172 84 aa1.04□□□□□ -2.24
MCF2-207ENST00000483690 LRP1BQ9NZR2 4599 aa1.04□□□□□ -2.24
MCF2-207ENST00000483690 DEFB131BA0A096LNP1 70 aa1.03□□□□□ -2.24
MCF2-207ENST00000483690 GVQW2A0A096LPI5 108 aaPredicted RBP1.03□□□□□ -2.24
MCF2-207ENST00000483690 MRPL33O75394 65 aaKnown RBP1.03□□□□□ -2.24
MCF2-207ENST00000483690 NDUFA3O95167 84 aa1.03□□□□□ -2.24
MCF2-207ENST00000483690 Q6ZRX8 168 aa1.03□□□□□ -2.24
MCF2-207ENST00000483690 TMEM167BQ9NRX6 74 aa1.03□□□□□ -2.24
MCF2-207ENST00000483690 TIMM8BQ9Y5J9 83 aaPredicted RBP1.03□□□□□ -2.24
MCF2-207ENST00000483690 STAB2Q8WWQ8 2551 aa1.03□□□□□ -2.24
MCF2-207ENST00000483690 HERC2O95714 4834 aa1.03□□□□□ -2.25
MCF2-207ENST00000483690 PKD1P98161 4303 aa1.02□□□□□ -2.25
MCF2-207ENST00000483690 HSPG2P98160 4391 aa1.02□□□□□ -2.25
MCF2-207ENST00000483690 PKHD1L1Q86WI1 4243 aa1.01□□□□□ -2.25
MCF2-207ENST00000483690 SSBP3-AS1Q7Z2R9 100 aa1.01□□□□□ -2.25
MCF2-207ENST00000483690 APOBP04114 4563 aaKnown RBP1.01□□□□□ -2.25
MCF2-207ENST00000483690 DEFB108BQ8NET1 73 aa1□□□□□ -2.25
MCF2-207ENST00000483690 MYCBP2O75592 4640 aa1□□□□□ -2.25
MCF2-207ENST00000483690 CRIP1P50238 77 aa0.99□□□□□ -2.25
MCF2-207ENST00000483690 LINC00158P58513 81 aa0.99□□□□□ -2.25
MCF2-207ENST00000483690 FAT1Q14517 4588 aa0.99□□□□□ -2.25
MCF2-207ENST00000483690 FAT3Q8TDW7 4589 aa0.99□□□□□ -2.25
MCF2-207ENST00000483690 DMBT1Q9UGM3 2413 aaPredicted RBP0.98□□□□□ -2.25
MCF2-207ENST00000483690 RPS27P42677 84 aaKnown RBP0.98□□□□□ -2.25
MCF2-207ENST00000483690 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
MCF2-207ENST00000483690 Q8IZM0 81 aa0.98□□□□□ -2.25
MCF2-207ENST00000483690 SMIM2Q9BVW6 85 aa0.98□□□□□ -2.25
MCF2-207ENST00000483690 CNFNQ9BYD5 112 aa0.98□□□□□ -2.25
MCF2-207ENST00000483690 ABCA13Q86UQ4 5058 aa0.98□□□□□ -2.25
MCF2-207ENST00000483690 KIAA1109Q2LD37 5005 aa0.97□□□□□ -2.25
MCF2-207ENST00000483690 HERC1Q15751 4861 aa0.97□□□□□ -2.25
MCF2-207ENST00000483690 H3BSH0 61 aa0.97□□□□□ -2.25
MCF2-207ENST00000483690 LINC00308Q8TCZ7 52 aa0.97□□□□□ -2.25
MCF2-207ENST00000483690 TTTY10Q9BZA0 68 aa0.97□□□□□ -2.25
MCF2-207ENST00000483690 CDKN2A-AS1Q9UH64 79 aa0.97□□□□□ -2.25
MCF2-207ENST00000483690 TNXBP22105 4242 aa0.96□□□□□ -2.26
MCF2-207ENST00000483690 H3BUX3 64 aa0.96□□□□□ -2.26
MCF2-207ENST00000483690 NDUFA1O15239 70 aa0.96□□□□□ -2.26
MCF2-207ENST00000483690 COX6B2Q6YFQ2 88 aa0.96□□□□□ -2.26
MCF2-207ENST00000483690 UBE2DNLQ8IWF7 75 aa0.96□□□□□ -2.26
MCF2-207ENST00000483690 CRIPTQ9P021 101 aa0.96□□□□□ -2.26
MCF2-207ENST00000483690 SRRM2Q9UQ35 2752 aaKnown RBP0.95□□□□□ -2.26
MCF2-207ENST00000483690 K7EQZ3 153 aa0.95□□□□□ -2.26
MCF2-207ENST00000483690 DEFB136Q30KP8 78 aa0.95□□□□□ -2.26
MCF2-207ENST00000483690 LINC01590Q5TEZ4 76 aa0.95□□□□□ -2.26
MCF2-207ENST00000483690 LEAP2Q969E1 77 aa0.95□□□□□ -2.26
MCF2-207ENST00000483690 LRP1Q07954 4544 aaKnown RBP0.95□□□□□ -2.26
MCF2-207ENST00000483690 I3L2K1 104 aa0.94□□□□□ -2.26
MCF2-207ENST00000483690 Q5VSD8 79 aa0.94□□□□□ -2.26
MCF2-207ENST00000483690 USMG5Q96IX5 58 aa0.94□□□□□ -2.26
MCF2-207ENST00000483690 MRPL34Q9BQ48 92 aaKnown RBP0.94□□□□□ -2.26
MCF2-207ENST00000483690 KAAG1Q9UBP8 84 aa0.94□□□□□ -2.26
MCF2-207ENST00000483690 SMR3BP02814 79 aaPredicted RBP0.93□□□□□ -2.26
MCF2-207ENST00000483690 LELP1Q5T871 98 aa0.93□□□□□ -2.26
MCF2-207ENST00000483690 TP53AIP1Q9HCN2 124 aa0.93□□□□□ -2.26
MCF2-207ENST00000483690 KRTAP2-3P0C7H8 128 aa0.92□□□□□ -2.26
MCF2-207ENST00000483690 APELAP0DMC3 54 aa0.92□□□□□ -2.26
MCF2-207ENST00000483690 IAPPP10997 89 aa0.92□□□□□ -2.26
MCF2-207ENST00000483690 PIGYQ3MUY2 71 aa0.92□□□□□ -2.26
MCF2-207ENST00000483690 KRTAP2-4Q9BYR9 128 aa0.92□□□□□ -2.26
MCF2-207ENST00000483690 KRTAP2-1Q9BYU5 128 aa0.92□□□□□ -2.26
MCF2-207ENST00000483690 AHNAK2Q8IVF2 5795 aa0.92□□□□□ -2.26
MCF2-207ENST00000483690 RNF213Q63HN8 5207 aa0.92□□□□□ -2.26
MCF2-207ENST00000483690 H0YAA0 97 aa0.91□□□□□ -2.26
MCF2-207ENST00000483690 RPL39P5Q59GN2 51 aa0.91□□□□□ -2.26
MCF2-207ENST00000483690 MINOS1Q5TGZ0 78 aa0.91□□□□□ -2.26
MCF2-207ENST00000483690 ARHGAP5-AS1Q96IT6 56 aa0.91□□□□□ -2.26
MCF2-207ENST00000483690 C6orf48Q9UBA6 75 aa0.91□□□□□ -2.26
MCF2-207ENST00000483690 DEFB104AQ8WTQ1 72 aa0.9□□□□□ -2.27
MCF2-207ENST00000483690 HMCN2Q8NDA2 5059 aa0.9□□□□□ -2.27
MCF2-207ENST00000483690 DEFB4AO15263 64 aa0.89□□□□□ -2.27
MCF2-207ENST00000483690 COX6A2Q02221 97 aa0.89□□□□□ -2.27
MCF2-207ENST00000483690 FSIP2Q5CZC0 6907 aa0.89□□□□□ -2.27
MCF2-207ENST00000483690 LRP2P98164 4655 aa0.88□□□□□ -2.27
MCF2-207ENST00000483690 IGLV5-48A0A075B6I7 105 aa0.88□□□□□ -2.27
MCF2-207ENST00000483690 POLR2KP53803 58 aaKnown RBP0.88□□□□□ -2.27
MCF2-207ENST00000483690 DEFB1P60022 68 aa0.88□□□□□ -2.27
MCF2-207ENST00000483690 DEFB135Q30KP9 77 aa0.88□□□□□ -2.27
MCF2-207ENST00000483690 APLNQ9ULZ1 77 aa0.88□□□□□ -2.27
MCF2-207ENST00000483690 MUC17Q685J3 4493 aa0.88□□□□□ -2.27
MCF2-207ENST00000483690 LPAP08519 4548 aa0.88□□□□□ -2.27
MCF2-207ENST00000483690 MUC2Q02817 5179 aa0.87□□□□□ -2.27
MCF2-207ENST00000483690 K7EIM0 57 aa0.86□□□□□ -2.27
MCF2-207ENST00000483690 WT1-ASQ06250 92 aa0.86□□□□□ -2.27
MCF2-207ENST00000483690 H1FX-AS1Q4G0G2 97 aa0.86□□□□□ -2.27
MCF2-207ENST00000483690 FLGP20930 4061 aaPredicted RBP0.85□□□□□ -2.27
MCF2-207ENST00000483690 H3BUA1 57 aa0.85□□□□□ -2.27
MCF2-207ENST00000483690 DEFB130BP0DP73 79 aa0.85□□□□□ -2.27
MCF2-207ENST00000483690 DEFB130AP0DP74 79 aa0.85□□□□□ -2.27
MCF2-207ENST00000483690 HTN3P15516 51 aa0.85□□□□□ -2.27
MCF2-207ENST00000483690 DEFB131AP59861 70 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms