RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
VTI1A-205ENST00000483122 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.41
VTI1A-205ENST00000483122 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
VTI1A-205ENST00000483122 A0A0D9SG42 100 aa6.2□□□□□ -1.42
VTI1A-205ENST00000483122 NDUFAF8A1L188 74 aa6.19□□□□□ -1.42
VTI1A-205ENST00000483122 KRTAP10-6P60371 365 aaPredicted RBP6.18□□□□□ -1.42
VTI1A-205ENST00000483122 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
VTI1A-205ENST00000483122 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
VTI1A-205ENST00000483122 BIRC6Q9NR09 4857 aa6.15□□□□□ -1.42
VTI1A-205ENST00000483122 RPS29P62273 56 aaKnown RBP6.14□□□□□ -1.43
VTI1A-205ENST00000483122 RYR1P21817 5038 aa6.13□□□□□ -1.43
VTI1A-205ENST00000483122 DMBT1Q9UGM3 2413 aaPredicted RBP6.12□□□□□ -1.43
VTI1A-205ENST00000483122 KRTAP3-3Q9BYR6 98 aa6.1□□□□□ -1.43
VTI1A-205ENST00000483122 KRTAP3-2Q9BYR7 98 aa6.1□□□□□ -1.43
VTI1A-205ENST00000483122 SMR3BP02814 79 aaPredicted RBP6.09□□□□□ -1.43
VTI1A-205ENST00000483122 KIAA1109Q2LD37 5005 aa6.09□□□□□ -1.43
VTI1A-205ENST00000483122 HSPG2P98160 4391 aa6.09□□□□□ -1.44
VTI1A-205ENST00000483122 PKHD1L1Q86WI1 4243 aa6.05□□□□□ -1.44
VTI1A-205ENST00000483122 S4R3F8 94 aa6.04□□□□□ -1.44
VTI1A-205ENST00000483122 Q5VSD8 79 aa6.04□□□□□ -1.44
VTI1A-205ENST00000483122 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
VTI1A-205ENST00000483122 FAT1Q14517 4588 aa6.01□□□□□ -1.45
VTI1A-205ENST00000483122 KRTAP10-4P60372 401 aaPredicted RBP6.01□□□□□ -1.45
VTI1A-205ENST00000483122 HERC2O95714 4834 aa6.01□□□□□ -1.45
VTI1A-205ENST00000483122 KRTAP17-1Q9BYP8 105 aa5.99□□□□□ -1.45
VTI1A-205ENST00000483122 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
VTI1A-205ENST00000483122 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
VTI1A-205ENST00000483122 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
VTI1A-205ENST00000483122 XP32Q5T750 250 aa5.91□□□□□ -1.46
VTI1A-205ENST00000483122 ABCA13Q86UQ4 5058 aa5.87□□□□□ -1.47
VTI1A-205ENST00000483122 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
VTI1A-205ENST00000483122 FAT3Q8TDW7 4589 aa5.86□□□□□ -1.47
VTI1A-205ENST00000483122 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
VTI1A-205ENST00000483122 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
VTI1A-205ENST00000483122 PCLOQ9Y6V0 5065 aa5.78□□□□□ -1.48
VTI1A-205ENST00000483122 TNXBP22105 4242 aa5.77□□□□□ -1.49
VTI1A-205ENST00000483122 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
VTI1A-205ENST00000483122 MT1HL1P0DM35 61 aa5.75□□□□□ -1.49
VTI1A-205ENST00000483122 KRTAP4-6Q9BYQ5 205 aa5.75□□□□□ -1.49
VTI1A-205ENST00000483122 J3QL48 77 aa5.74□□□□□ -1.49
VTI1A-205ENST00000483122 M0QZ58 72 aa5.72□□□□□ -1.49
VTI1A-205ENST00000483122 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
VTI1A-205ENST00000483122 LUZP6Q538Z0 58 aa5.69□□□□□ -1.5
VTI1A-205ENST00000483122 LPAP08519 4548 aa5.64□□□□□ -1.51
VTI1A-205ENST00000483122 HERC1Q15751 4861 aa5.54□□□□□ -1.52
VTI1A-205ENST00000483122 R4GN34 69 aa5.54□□□□□ -1.52
VTI1A-205ENST00000483122 LORP23490 312 aaPredicted RBP5.49□□□□□ -1.53
VTI1A-205ENST00000483122 LRP2P98164 4655 aa5.48□□□□□ -1.53
VTI1A-205ENST00000483122 HMCN2Q8NDA2 5059 aa5.47□□□□□ -1.53
VTI1A-205ENST00000483122 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
VTI1A-205ENST00000483122 CAMK2N1Q7Z7J9 78 aa5.31□□□□□ -1.56
VTI1A-205ENST00000483122 SEC61BP60468 96 aaKnown RBP5.27□□□□□ -1.57
VTI1A-205ENST00000483122 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
VTI1A-205ENST00000483122 LCE2BO14633 110 aa5.26□□□□□ -1.57
VTI1A-205ENST00000483122 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
VTI1A-205ENST00000483122 UBR4Q5T4S7 5183 aa5.23□□□□□ -1.57
VTI1A-205ENST00000483122 RNF213Q63HN8 5207 aa5.16□□□□□ -1.58
VTI1A-205ENST00000483122 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
VTI1A-205ENST00000483122 TNP1P09430 55 aa5.14□□□□□ -1.59
VTI1A-205ENST00000483122 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
VTI1A-205ENST00000483122 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
VTI1A-205ENST00000483122 MUC2Q02817 5179 aa5.07□□□□□ -1.6
VTI1A-205ENST00000483122 PRO2289Q9P1D8 64 aa5.02□□□□□ -1.61
VTI1A-205ENST00000483122 KRTAP4-8Q9BYQ9 185 aa4.99□□□□□ -1.61
VTI1A-205ENST00000483122 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
VTI1A-205ENST00000483122 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
VTI1A-205ENST00000483122 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
VTI1A-205ENST00000483122 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
VTI1A-205ENST00000483122 LCE3AQ5TA76 89 aa4.89□□□□□ -1.63
VTI1A-205ENST00000483122 INE1O15225 51 aa4.87□□□□□ -1.63
VTI1A-205ENST00000483122 MT1HP80294 61 aa4.86□□□□□ -1.63
VTI1A-205ENST00000483122 M0R2T5 61 aa4.81□□□□□ -1.64
VTI1A-205ENST00000483122 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
VTI1A-205ENST00000483122 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
VTI1A-205ENST00000483122 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
VTI1A-205ENST00000483122 KRTAP19-1Q8IUB9 90 aa4.75□□□□□ -1.65
VTI1A-205ENST00000483122 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
VTI1A-205ENST00000483122 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
VTI1A-205ENST00000483122 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
VTI1A-205ENST00000483122 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
VTI1A-205ENST00000483122 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
VTI1A-205ENST00000483122 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
VTI1A-205ENST00000483122 MT2AP02795 61 aa4.62□□□□□ -1.67
VTI1A-205ENST00000483122 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
VTI1A-205ENST00000483122 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
VTI1A-205ENST00000483122 MT1FP04733 61 aa4.57□□□□□ -1.68
VTI1A-205ENST00000483122 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
VTI1A-205ENST00000483122 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
VTI1A-205ENST00000483122 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
VTI1A-205ENST00000483122 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
VTI1A-205ENST00000483122 MT1XP80297 61 aa4.51□□□□□ -1.69
VTI1A-205ENST00000483122 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
VTI1A-205ENST00000483122 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
VTI1A-205ENST00000483122 KRTAP19-8Q3LI54 63 aa4.46□□□□□ -1.69
VTI1A-205ENST00000483122 MT1BP07438 61 aa4.45□□□□□ -1.7
VTI1A-205ENST00000483122 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
VTI1A-205ENST00000483122 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
VTI1A-205ENST00000483122 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
VTI1A-205ENST00000483122 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
VTI1A-205ENST00000483122 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms