RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 MYCBP2O75592 4640 aa5.81□□□□□ -1.48
APTX-225ENST00000482687 ROMO1P60602 79 aa5.8□□□□□ -1.48
APTX-225ENST00000482687 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
APTX-225ENST00000482687 RPS29P62273 56 aaKnown RBP5.79□□□□□ -1.48
APTX-225ENST00000482687 IGKV2-30P06310 120 aa5.79□□□□□ -1.48
APTX-225ENST00000482687 MT1HL1P0DM35 61 aa5.79□□□□□ -1.48
APTX-225ENST00000482687 ABCA13Q86UQ4 5058 aa5.78□□□□□ -1.48
APTX-225ENST00000482687 HERC2O95714 4834 aa5.77□□□□□ -1.49
APTX-225ENST00000482687 A8MUU9 505 aa5.75□□□□□ -1.49
APTX-225ENST00000482687 C9orf92A6NGG3 77 aa5.73□□□□□ -1.49
APTX-225ENST00000482687 KRTAP16-1A8MUX0 517 aa5.71□□□□□ -1.5
APTX-225ENST00000482687 IGKV2D-30A0A075B6S6 120 aa5.7□□□□□ -1.5
APTX-225ENST00000482687 DMBT1Q9UGM3 2413 aaPredicted RBP5.69□□□□□ -1.5
APTX-225ENST00000482687 J3QL48 77 aa5.65□□□□□ -1.5
APTX-225ENST00000482687 H0YAA0 97 aa5.64□□□□□ -1.51
APTX-225ENST00000482687 P0C880 135 aa5.61□□□□□ -1.51
APTX-225ENST00000482687 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
APTX-225ENST00000482687 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
APTX-225ENST00000482687 C20orf166-AS1Q96NR2 134 aa5.56□□□□□ -1.52
APTX-225ENST00000482687 PCLOQ9Y6V0 5065 aa5.56□□□□□ -1.52
APTX-225ENST00000482687 A0A1B0GU33 70 aa5.54□□□□□ -1.52
APTX-225ENST00000482687 XP32Q5T750 250 aa5.54□□□□□ -1.52
APTX-225ENST00000482687 LPAP08519 4548 aa5.54□□□□□ -1.52
APTX-225ENST00000482687 H1FX-AS1Q4G0G2 97 aa5.54□□□□□ -1.52
APTX-225ENST00000482687 K7ERS5 55 aa5.53□□□□□ -1.52
APTX-225ENST00000482687 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
APTX-225ENST00000482687 RPL37P61927 97 aaKnown RBP5.49□□□□□ -1.53
APTX-225ENST00000482687 TPRXLQ17RH7 258 aa5.47□□□□□ -1.53
APTX-225ENST00000482687 LRP2P98164 4655 aa5.45□□□□□ -1.54
APTX-225ENST00000482687 HERC1Q15751 4861 aa5.42□□□□□ -1.54
APTX-225ENST00000482687 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
APTX-225ENST00000482687 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.55
APTX-225ENST00000482687 CRIPTQ9P021 101 aa5.4□□□□□ -1.55
APTX-225ENST00000482687 NDUFAF8A1L188 74 aa5.36□□□□□ -1.55
APTX-225ENST00000482687 COX6B2Q6YFQ2 88 aa5.36□□□□□ -1.55
APTX-225ENST00000482687 HMCN2Q8NDA2 5059 aa5.35□□□□□ -1.55
APTX-225ENST00000482687 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
APTX-225ENST00000482687 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
APTX-225ENST00000482687 SEC61BP60468 96 aaKnown RBP5.3□□□□□ -1.56
APTX-225ENST00000482687 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
APTX-225ENST00000482687 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
APTX-225ENST00000482687 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
APTX-225ENST00000482687 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
APTX-225ENST00000482687 MUC2Q02817 5179 aa5.15□□□□□ -1.59
APTX-225ENST00000482687 S4R3F8 94 aa5.13□□□□□ -1.59
APTX-225ENST00000482687 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
APTX-225ENST00000482687 A0A0D9SG42 100 aa5.12□□□□□ -1.59
APTX-225ENST00000482687 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
APTX-225ENST00000482687 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
APTX-225ENST00000482687 LCE2BO14633 110 aa5.09□□□□□ -1.6
APTX-225ENST00000482687 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
APTX-225ENST00000482687 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
APTX-225ENST00000482687 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
APTX-225ENST00000482687 LCE2CQ5TA81 110 aa4.98□□□□□ -1.61
APTX-225ENST00000482687 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.61
APTX-225ENST00000482687 M0QZ58 72 aa4.92□□□□□ -1.62
APTX-225ENST00000482687 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
APTX-225ENST00000482687 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
APTX-225ENST00000482687 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.63
APTX-225ENST00000482687 MT1HP80294 61 aa4.88□□□□□ -1.63
APTX-225ENST00000482687 M0R2T5 61 aa4.86□□□□□ -1.63
APTX-225ENST00000482687 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.86□□□□□ -1.63
APTX-225ENST00000482687 LCE2AQ5TA79 106 aaPredicted RBP4.83□□□□□ -1.64
APTX-225ENST00000482687 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
APTX-225ENST00000482687 KRTAP9-6A0A140TA67 174 aa4.8□□□□□ -1.64
APTX-225ENST00000482687 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
APTX-225ENST00000482687 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
APTX-225ENST00000482687 R4GN34 69 aa4.71□□□□□ -1.66
APTX-225ENST00000482687 MT2AP02795 61 aa4.7□□□□□ -1.66
APTX-225ENST00000482687 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
APTX-225ENST00000482687 MT1FP04733 61 aa4.68□□□□□ -1.66
APTX-225ENST00000482687 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
APTX-225ENST00000482687 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
APTX-225ENST00000482687 KRTAP4-8A0A0G2JLE6 195 aa4.62□□□□□ -1.67
APTX-225ENST00000482687 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
APTX-225ENST00000482687 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
APTX-225ENST00000482687 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
APTX-225ENST00000482687 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
APTX-225ENST00000482687 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
APTX-225ENST00000482687 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
APTX-225ENST00000482687 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
APTX-225ENST00000482687 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
APTX-225ENST00000482687 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
APTX-225ENST00000482687 KRTAP4-7Q9BYR0 210 aa4.49□□□□□ -1.69
APTX-225ENST00000482687 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
APTX-225ENST00000482687 INE1O15225 51 aa4.43□□□□□ -1.7
APTX-225ENST00000482687 KRTAP19-8Q3LI54 63 aa4.43□□□□□ -1.7
APTX-225ENST00000482687 MT1BP07438 61 aa4.41□□□□□ -1.7
APTX-225ENST00000482687 TNP1P09430 55 aa4.37□□□□□ -1.71
APTX-225ENST00000482687 USH2AO75445 5202 aa4.34□□□□□ -1.71
APTX-225ENST00000482687 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
APTX-225ENST00000482687 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
APTX-225ENST00000482687 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
APTX-225ENST00000482687 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
APTX-225ENST00000482687 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
APTX-225ENST00000482687 MT1XP80297 61 aa4.26□□□□□ -1.73
APTX-225ENST00000482687 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
APTX-225ENST00000482687 SSPOA2VEC9 5147 aa4.2□□□□□ -1.74
APTX-225ENST00000482687 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
APTX-225ENST00000482687 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms