RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 VPS13BQ7Z7G8 4022 aa3.24□□□□□ -1.89
RTN1-206ENST00000481205 DYNC1H1Q14204 4646 aaKnown RBP3.22□□□□□ -1.89
RTN1-206ENST00000481205 IGLV7-43P04211 117 aa3.22□□□□□ -1.89
RTN1-206ENST00000481205 Q5W150 140 aa3.22□□□□□ -1.89
RTN1-206ENST00000481205 RYR2Q92736 4967 aa3.22□□□□□ -1.89
RTN1-206ENST00000481205 ACYP2P14621 99 aa3.2□□□□□ -1.9
RTN1-206ENST00000481205 FAT1Q14517 4588 aa3.2□□□□□ -1.9
RTN1-206ENST00000481205 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
RTN1-206ENST00000481205 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
RTN1-206ENST00000481205 KRTAP10-1P60331 282 aa3.19□□□□□ -1.9
RTN1-206ENST00000481205 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
RTN1-206ENST00000481205 SSBP3-AS1Q7Z2R9 100 aa3.19□□□□□ -1.9
RTN1-206ENST00000481205 KRTAP9-8Q9BYQ0 159 aa3.19□□□□□ -1.9
RTN1-206ENST00000481205 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
RTN1-206ENST00000481205 LINC00304Q8N9R0 145 aa3.18□□□□□ -1.9
RTN1-206ENST00000481205 CRIPTQ9P021 101 aa3.18□□□□□ -1.9
RTN1-206ENST00000481205 IGKV2-30P06310 120 aa3.17□□□□□ -1.9
RTN1-206ENST00000481205 RYR3Q15413 4870 aa3.16□□□□□ -1.9
RTN1-206ENST00000481205 TYMSOSQ8TAI1 123 aa3.16□□□□□ -1.9
RTN1-206ENST00000481205 APOBP04114 4563 aaKnown RBP3.16□□□□□ -1.9
RTN1-206ENST00000481205 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
RTN1-206ENST00000481205 IGKV2D-30A0A075B6S6 120 aa3.13□□□□□ -1.91
RTN1-206ENST00000481205 Q6ZSA8 131 aa3.13□□□□□ -1.91
RTN1-206ENST00000481205 KRTAP13-3Q3SY46 172 aa3.12□□□□□ -1.91
RTN1-206ENST00000481205 FLG2Q5D862 2391 aaPredicted RBP3.12□□□□□ -1.91
RTN1-206ENST00000481205 KRTAP13-2Q52LG2 175 aa3.12□□□□□ -1.91
RTN1-206ENST00000481205 KRTAP19-1Q8IUB9 90 aa3.11□□□□□ -1.91
RTN1-206ENST00000481205 SMR3BP02814 79 aaPredicted RBP3.1□□□□□ -1.91
RTN1-206ENST00000481205 A0A1B0GVY2 172 aa3.09□□□□□ -1.91
RTN1-206ENST00000481205 LRP1Q07954 4544 aaKnown RBP3.08□□□□□ -1.92
RTN1-206ENST00000481205 KRTAP1-4P0C5Y4 121 aa3.08□□□□□ -1.92
RTN1-206ENST00000481205 SPINK1P00995 79 aa3.08□□□□□ -1.92
RTN1-206ENST00000481205 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
RTN1-206ENST00000481205 KIAA1109Q2LD37 5005 aa3.06□□□□□ -1.92
RTN1-206ENST00000481205 HSPG2P98160 4391 aa3.06□□□□□ -1.92
RTN1-206ENST00000481205 H0YAA0 97 aa3.06□□□□□ -1.92
RTN1-206ENST00000481205 EPPK1P58107 5090 aaKnown RBP3.06□□□□□ -1.92
RTN1-206ENST00000481205 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
RTN1-206ENST00000481205 RYR1P21817 5038 aa3.05□□□□□ -1.92
RTN1-206ENST00000481205 FAT3Q8TDW7 4589 aa3.03□□□□□ -1.92
RTN1-206ENST00000481205 MYCBP2O75592 4640 aa3.03□□□□□ -1.92
RTN1-206ENST00000481205 TPRXLQ17RH7 258 aa3.03□□□□□ -1.92
RTN1-206ENST00000481205 KRTAP10-4P60372 401 aaPredicted RBP3.02□□□□□ -1.93
RTN1-206ENST00000481205 C9orf92A6NGG3 77 aa3.01□□□□□ -1.93
RTN1-206ENST00000481205 KRTAP4-5Q9BYR2 181 aa3.01□□□□□ -1.93
RTN1-206ENST00000481205 TNXBP22105 4242 aa3.01□□□□□ -1.93
RTN1-206ENST00000481205 DMBT1Q9UGM3 2413 aaPredicted RBP2.99□□□□□ -1.93
RTN1-206ENST00000481205 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
RTN1-206ENST00000481205 A0A1B0GU33 70 aa2.97□□□□□ -1.93
RTN1-206ENST00000481205 RPS29P62273 56 aaKnown RBP2.97□□□□□ -1.93
RTN1-206ENST00000481205 C10orf95Q9H7T3 257 aa2.97□□□□□ -1.93
RTN1-206ENST00000481205 H1FX-AS1Q4G0G2 97 aa2.94□□□□□ -1.94
RTN1-206ENST00000481205 Q5VSD8 79 aa2.93□□□□□ -1.94
RTN1-206ENST00000481205 ABCA13Q86UQ4 5058 aa2.92□□□□□ -1.94
RTN1-206ENST00000481205 LCE5AQ5TCM9 118 aa2.9□□□□□ -1.94
RTN1-206ENST00000481205 COX6B2Q6YFQ2 88 aa2.89□□□□□ -1.95
RTN1-206ENST00000481205 HERC2O95714 4834 aa2.89□□□□□ -1.95
RTN1-206ENST00000481205 BIRC6Q9NR09 4857 aa2.88□□□□□ -1.95
RTN1-206ENST00000481205 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
RTN1-206ENST00000481205 RPL37P61927 97 aaKnown RBP2.87□□□□□ -1.95
RTN1-206ENST00000481205 LPAP08519 4548 aa2.86□□□□□ -1.95
RTN1-206ENST00000481205 LRP2P98164 4655 aa2.86□□□□□ -1.95
RTN1-206ENST00000481205 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
RTN1-206ENST00000481205 MT1HL1P0DM35 61 aa2.85□□□□□ -1.95
RTN1-206ENST00000481205 KRTAP19-4Q3LI73 84 aa2.85□□□□□ -1.95
RTN1-206ENST00000481205 PLAC4Q8WY50 150 aa2.84□□□□□ -1.96
RTN1-206ENST00000481205 A0A0D9SG42 100 aa2.82□□□□□ -1.96
RTN1-206ENST00000481205 R4GN34 69 aa2.81□□□□□ -1.96
RTN1-206ENST00000481205 S4R3F8 94 aa2.8□□□□□ -1.96
RTN1-206ENST00000481205 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
RTN1-206ENST00000481205 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
RTN1-206ENST00000481205 PCLOQ9Y6V0 5065 aa2.78□□□□□ -1.96
RTN1-206ENST00000481205 HERC1Q15751 4861 aa2.77□□□□□ -1.97
RTN1-206ENST00000481205 KRTAP10-6P60371 365 aaPredicted RBP2.77□□□□□ -1.97
RTN1-206ENST00000481205 MUC2Q02817 5179 aa2.75□□□□□ -1.97
RTN1-206ENST00000481205 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
RTN1-206ENST00000481205 KRTAP9-3Q9BYQ3 159 aa2.75□□□□□ -1.97
RTN1-206ENST00000481205 HMCN2Q8NDA2 5059 aa2.68□□□□□ -1.98
RTN1-206ENST00000481205 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
RTN1-206ENST00000481205 INE1O15225 51 aa2.67□□□□□ -1.98
RTN1-206ENST00000481205 M0QZ58 72 aa2.66□□□□□ -1.98
RTN1-206ENST00000481205 KRTAP12-1P59990 96 aa2.65□□□□□ -1.98
RTN1-206ENST00000481205 KRTAP4-1Q9BYQ7 146 aa2.65□□□□□ -1.98
RTN1-206ENST00000481205 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
RTN1-206ENST00000481205 RNF213Q63HN8 5207 aa2.64□□□□□ -1.99
RTN1-206ENST00000481205 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
RTN1-206ENST00000481205 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
RTN1-206ENST00000481205 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
RTN1-206ENST00000481205 FLGP20930 4061 aaPredicted RBP2.57□□□□□ -2
RTN1-206ENST00000481205 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
RTN1-206ENST00000481205 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
RTN1-206ENST00000481205 LCE1AQ5T7P2 110 aa2.51□□□□□ -2.01
RTN1-206ENST00000481205 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
RTN1-206ENST00000481205 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
RTN1-206ENST00000481205 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
RTN1-206ENST00000481205 TNP1P09430 55 aa2.41□□□□□ -2.02
RTN1-206ENST00000481205 MT1HP80294 61 aa2.39□□□□□ -2.03
RTN1-206ENST00000481205 M0R2T5 61 aa2.37□□□□□ -2.03
RTN1-206ENST00000481205 KRTAP2-2Q9BYT5 123 aa2.37□□□□□ -2.03
RTN1-206ENST00000481205 MT1FP04733 61 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms