RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 KRTAP10-6P60371 365 aaPredicted RBP2.12□□□□□ -2.07
GPCPD1-205ENST00000481038 LCE2BO14633 110 aa2.12□□□□□ -2.07
GPCPD1-205ENST00000481038 RYR3Q15413 4870 aa2.12□□□□□ -2.07
GPCPD1-205ENST00000481038 HUWE1Q7Z6Z7 4374 aaKnown RBP2.12□□□□□ -2.07
GPCPD1-205ENST00000481038 SVEP1Q4LDE5 3571 aa2.11□□□□□ -2.07
GPCPD1-205ENST00000481038 KRTAP3-1Q9BYR8 98 aa2.11□□□□□ -2.07
GPCPD1-205ENST00000481038 CUBNO60494 3623 aa2.11□□□□□ -2.07
GPCPD1-205ENST00000481038 RYR2Q92736 4967 aa2.1□□□□□ -2.07
GPCPD1-205ENST00000481038 ANK2Q01484 3957 aa2.08□□□□□ -2.08
GPCPD1-205ENST00000481038 KRTAP10-10P60014 251 aa2.07□□□□□ -2.08
GPCPD1-205ENST00000481038 DNAH9Q9NYC9 4486 aa2.07□□□□□ -2.08
GPCPD1-205ENST00000481038 DNAH1Q9P2D7 4330 aa2.07□□□□□ -2.08
GPCPD1-205ENST00000481038 DNAH10Q8IVF4 4471 aa2.06□□□□□ -2.08
GPCPD1-205ENST00000481038 KIAA1109Q2LD37 5005 aa2.05□□□□□ -2.08
GPCPD1-205ENST00000481038 DNAH11Q96DT5 4516 aa2.03□□□□□ -2.08
GPCPD1-205ENST00000481038 LCE2CQ5TA81 110 aa2.03□□□□□ -2.09
GPCPD1-205ENST00000481038 KRTAP4-5Q9BYR2 181 aa2.02□□□□□ -2.09
GPCPD1-205ENST00000481038 DNAH17Q9UFH2 4485 aa2.02□□□□□ -2.09
GPCPD1-205ENST00000481038 PRKDCP78527 4128 aaKnown RBP2.02□□□□□ -2.09
GPCPD1-205ENST00000481038 LCE2AQ5TA79 106 aaPredicted RBP2.02□□□□□ -2.09
GPCPD1-205ENST00000481038 DNAH6Q9C0G6 4158 aa2.01□□□□□ -2.09
GPCPD1-205ENST00000481038 BIRC6Q9NR09 4857 aa2□□□□□ -2.09
GPCPD1-205ENST00000481038 VPS13DQ5THJ4 4388 aa2□□□□□ -2.09
GPCPD1-205ENST00000481038 TRRAPQ9Y4A5 3859 aa1.99□□□□□ -2.09
GPCPD1-205ENST00000481038 HERC2O95714 4834 aa1.98□□□□□ -2.09
GPCPD1-205ENST00000481038 PLECQ15149 4684 aaKnown RBP1.98□□□□□ -2.09
GPCPD1-205ENST00000481038 DYNC2H1Q8NCM8 4307 aaKnown RBP1.96□□□□□ -2.1
GPCPD1-205ENST00000481038 LORP23490 312 aaPredicted RBP1.95□□□□□ -2.1
GPCPD1-205ENST00000481038 DNAH2Q9P225 4427 aa1.95□□□□□ -2.1
GPCPD1-205ENST00000481038 DNAH3Q8TD57 4116 aa1.95□□□□□ -2.1
GPCPD1-205ENST00000481038 DYNC1H1Q14204 4646 aaKnown RBP1.94□□□□□ -2.1
GPCPD1-205ENST00000481038 HMCN2Q8NDA2 5059 aa1.92□□□□□ -2.1
GPCPD1-205ENST00000481038 ABCA13Q86UQ4 5058 aa1.92□□□□□ -2.1
GPCPD1-205ENST00000481038 DNAH5Q8TE73 4624 aa1.92□□□□□ -2.1
GPCPD1-205ENST00000481038 LRP1BQ9NZR2 4599 aa1.91□□□□□ -2.1
GPCPD1-205ENST00000481038 CSMD3Q7Z407 3707 aa1.91□□□□□ -2.1
GPCPD1-205ENST00000481038 UBR4Q5T4S7 5183 aa1.9□□□□□ -2.11
GPCPD1-205ENST00000481038 FAT2Q9NYQ8 4349 aa1.89□□□□□ -2.11
GPCPD1-205ENST00000481038 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
GPCPD1-205ENST00000481038 HERC1Q15751 4861 aa1.89□□□□□ -2.11
GPCPD1-205ENST00000481038 LCE3AQ5TA76 89 aa1.89□□□□□ -2.11
GPCPD1-205ENST00000481038 DNAH8Q96JB1 4490 aa1.88□□□□□ -2.11
GPCPD1-205ENST00000481038 SACSQ9NZJ4 4579 aa1.88□□□□□ -2.11
GPCPD1-205ENST00000481038 KRTAP10-5P60370 271 aa1.86□□□□□ -2.11
GPCPD1-205ENST00000481038 KRTAP10-12P60413 245 aa1.86□□□□□ -2.11
GPCPD1-205ENST00000481038 STARD9Q9P2P6 4700 aa1.86□□□□□ -2.11
GPCPD1-205ENST00000481038 MT1HP80294 61 aa1.85□□□□□ -2.11
GPCPD1-205ENST00000481038 HSPG2P98160 4391 aa1.83□□□□□ -2.12
GPCPD1-205ENST00000481038 SRRM2Q9UQ35 2752 aaKnown RBP1.82□□□□□ -2.12
GPCPD1-205ENST00000481038 CMYA5Q8N3K9 4069 aa1.82□□□□□ -2.12
GPCPD1-205ENST00000481038 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
GPCPD1-205ENST00000481038 KRTAP4-1Q9BYQ7 146 aa1.82□□□□□ -2.12
GPCPD1-205ENST00000481038 LYSTQ99698 3801 aa1.81□□□□□ -2.12
GPCPD1-205ENST00000481038 DNAH7Q8WXX0 4024 aa1.81□□□□□ -2.12
GPCPD1-205ENST00000481038 SPRR2GQ9BYE4 73 aa1.81□□□□□ -2.12
GPCPD1-205ENST00000481038 APOBP04114 4563 aaKnown RBP1.8□□□□□ -2.12
GPCPD1-205ENST00000481038 CRCT1Q9UGL9 99 aa1.8□□□□□ -2.12
GPCPD1-205ENST00000481038 MT2AP02795 61 aa1.79□□□□□ -2.12
GPCPD1-205ENST00000481038 MYCBP2O75592 4640 aa1.79□□□□□ -2.12
GPCPD1-205ENST00000481038 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.12
GPCPD1-205ENST00000481038 FRAS1Q86XX4 4008 aa1.78□□□□□ -2.12
GPCPD1-205ENST00000481038 FAT1Q14517 4588 aa1.76□□□□□ -2.13
GPCPD1-205ENST00000481038 USH2AO75445 5202 aa1.75□□□□□ -2.13
GPCPD1-205ENST00000481038 FAT4Q6V0I7 4981 aa1.75□□□□□ -2.13
GPCPD1-205ENST00000481038 KRTAP19-8Q3LI54 63 aa1.75□□□□□ -2.13
GPCPD1-205ENST00000481038 PKHD1P08F94 4074 aa1.74□□□□□ -2.13
GPCPD1-205ENST00000481038 HECTD4Q9Y4D8 3996 aa1.74□□□□□ -2.13
GPCPD1-205ENST00000481038 FAT3Q8TDW7 4589 aa1.74□□□□□ -2.13
GPCPD1-205ENST00000481038 PKHD1L1Q86WI1 4243 aa1.73□□□□□ -2.13
GPCPD1-205ENST00000481038 MT1FP04733 61 aa1.73□□□□□ -2.13
GPCPD1-205ENST00000481038 SSPOA2VEC9 5147 aa1.72□□□□□ -2.13
GPCPD1-205ENST00000481038 VPS13BQ7Z7G8 4022 aa1.72□□□□□ -2.13
GPCPD1-205ENST00000481038 KRTAP8-1Q8IUC2 63 aa1.71□□□□□ -2.14
GPCPD1-205ENST00000481038 KMT2AQ03164 3969 aa1.7□□□□□ -2.14
GPCPD1-205ENST00000481038 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
GPCPD1-205ENST00000481038 LCE3CQ5T5A8 94 aa1.68□□□□□ -2.14
GPCPD1-205ENST00000481038 PKD1P98161 4303 aa1.68□□□□□ -2.14
GPCPD1-205ENST00000481038 KRTAP9-8Q9BYQ0 159 aa1.67□□□□□ -2.14
GPCPD1-205ENST00000481038 MUC2Q02817 5179 aa1.67□□□□□ -2.14
GPCPD1-205ENST00000481038 KRTAP19-1Q8IUB9 90 aa1.66□□□□□ -2.14
GPCPD1-205ENST00000481038 KRTAP19-2Q3LHN2 52 aa1.66□□□□□ -2.14
GPCPD1-205ENST00000481038 LRP1Q07954 4544 aaKnown RBP1.65□□□□□ -2.14
GPCPD1-205ENST00000481038 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.14
GPCPD1-205ENST00000481038 KRTAP9-3Q9BYQ3 159 aa1.65□□□□□ -2.15
GPCPD1-205ENST00000481038 MUC17Q685J3 4493 aa1.64□□□□□ -2.15
GPCPD1-205ENST00000481038 LOC100996750A0A140TA64 210 aa1.64□□□□□ -2.15
GPCPD1-205ENST00000481038 KRTAP4-6Q9BYQ5 205 aa1.64□□□□□ -2.15
GPCPD1-205ENST00000481038 LRP2P98164 4655 aa1.63□□□□□ -2.15
GPCPD1-205ENST00000481038 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
GPCPD1-205ENST00000481038 MT1BP07438 61 aa1.61□□□□□ -2.15
GPCPD1-205ENST00000481038 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.15
GPCPD1-205ENST00000481038 KRTAP10-7P60409 375 aaPredicted RBP1.58□□□□□ -2.16
GPCPD1-205ENST00000481038 MT1XP80297 61 aa1.58□□□□□ -2.16
GPCPD1-205ENST00000481038 TNXBP22105 4242 aa1.58□□□□□ -2.16
GPCPD1-205ENST00000481038 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
GPCPD1-205ENST00000481038 KRTAP9-9Q9BYP9 154 aa1.57□□□□□ -2.16
GPCPD1-205ENST00000481038 KRTAP9-4Q9BYQ2 154 aa1.57□□□□□ -2.16
GPCPD1-205ENST00000481038 KRTAP19-5Q3LI72 72 aa1.57□□□□□ -2.16
GPCPD1-205ENST00000481038 KRTAP9-2Q9BYQ4 174 aa1.55□□□□□ -2.16
GPCPD1-205ENST00000481038 KRTAP4-8Q9BYQ9 185 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms