RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 TRAV22A0A0B4J277 110 aa3.22□□□□□ -1.89
COL17A1-205ENST00000480127 LOC105371267A0A1B0GV96 52 aa3.22□□□□□ -1.89
COL17A1-205ENST00000480127 PCP4L1A6NKN8 68 aa3.22□□□□□ -1.89
COL17A1-205ENST00000480127 HIST1H4AP62805 103 aaKnown RBP3.22□□□□□ -1.89
COL17A1-205ENST00000480127 ETDBQ3ZM63 59 aa3.22□□□□□ -1.89
COL17A1-205ENST00000480127 LOC101927531A0A1B0GV80 90 aa3.21□□□□□ -1.9
COL17A1-205ENST00000480127 F8W1H4 67 aa3.21□□□□□ -1.9
COL17A1-205ENST00000480127 MT1BP07438 61 aa3.21□□□□□ -1.9
COL17A1-205ENST00000480127 PRO0461Q9UI25 63 aa3.21□□□□□ -1.9
COL17A1-205ENST00000480127 NDUFC1O43677 76 aa3.2□□□□□ -1.9
COL17A1-205ENST00000480127 KLKP1Q107X0 134 aa3.2□□□□□ -1.9
COL17A1-205ENST00000480127 KMT2DO14686 5537 aa3.19□□□□□ -1.9
COL17A1-205ENST00000480127 CYP4F30PQ9H0H9 118 aa3.19□□□□□ -1.9
COL17A1-205ENST00000480127 ATOX1O00244 68 aa3.18□□□□□ -1.9
COL17A1-205ENST00000480127 ACYP1P07311 99 aa3.18□□□□□ -1.9
COL17A1-205ENST00000480127 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
COL17A1-205ENST00000480127 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
COL17A1-205ENST00000480127 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
COL17A1-205ENST00000480127 KRTAP3-1Q9BYR8 98 aa3.18□□□□□ -1.9
COL17A1-205ENST00000480127 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
COL17A1-205ENST00000480127 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
COL17A1-205ENST00000480127 H0Y9P7 68 aa3.17□□□□□ -1.9
COL17A1-205ENST00000480127 ATP5EP2Q5VTU8 51 aa3.17□□□□□ -1.9
COL17A1-205ENST00000480127 UQCRQO14949 82 aa3.16□□□□□ -1.9
COL17A1-205ENST00000480127 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
COL17A1-205ENST00000480127 CRIPTQ9P021 101 aa3.16□□□□□ -1.9
COL17A1-205ENST00000480127 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
COL17A1-205ENST00000480127 MP68P56378 58 aa3.13□□□□□ -1.91
COL17A1-205ENST00000480127 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
COL17A1-205ENST00000480127 A8MUN3 132 aa3.12□□□□□ -1.91
COL17A1-205ENST00000480127 LINC00208Q96KT6 92 aa3.12□□□□□ -1.91
COL17A1-205ENST00000480127 ADM2Q7Z4H4 148 aa3.11□□□□□ -1.91
COL17A1-205ENST00000480127 PLAC4Q8WY50 150 aa3.11□□□□□ -1.91
COL17A1-205ENST00000480127 PRO2289Q9P1D8 64 aa3.11□□□□□ -1.91
COL17A1-205ENST00000480127 A0A087WVE0 104 aa3.1□□□□□ -1.91
COL17A1-205ENST00000480127 FAM240AA0A1B0GVK7 77 aa3.1□□□□□ -1.91
COL17A1-205ENST00000480127 C20orf197Q8N268 126 aa3.1□□□□□ -1.91
COL17A1-205ENST00000480127 SCGB1A1P11684 91 aa3.09□□□□□ -1.91
COL17A1-205ENST00000480127 R4GN34 69 aa3.09□□□□□ -1.91
COL17A1-205ENST00000480127 LINC00643Q86TS7 51 aa3.08□□□□□ -1.92
COL17A1-205ENST00000480127 SPRR2EP22531 72 aa3.07□□□□□ -1.92
COL17A1-205ENST00000480127 SPRR2BP35325 72 aa3.07□□□□□ -1.92
COL17A1-205ENST00000480127 SPRR2AP35326 72 aa3.07□□□□□ -1.92
COL17A1-205ENST00000480127 SPRR2FQ96RM1 72 aa3.07□□□□□ -1.92
COL17A1-205ENST00000480127 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
COL17A1-205ENST00000480127 KRTAP2-1Q9BYU5 128 aa3.07□□□□□ -1.92
COL17A1-205ENST00000480127 H0YAA0 97 aa3.06□□□□□ -1.92
COL17A1-205ENST00000480127 LINC01554Q52M75 96 aa3.06□□□□□ -1.92
COL17A1-205ENST00000480127 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
COL17A1-205ENST00000480127 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
COL17A1-205ENST00000480127 M0QZ58 72 aa3.05□□□□□ -1.92
COL17A1-205ENST00000480127 J3QR89 54 aa3.04□□□□□ -1.92
COL17A1-205ENST00000480127 MT-ATP8P03928 68 aa3.02□□□□□ -1.93
COL17A1-205ENST00000480127 LCE1AQ5T7P2 110 aa3.02□□□□□ -1.93
COL17A1-205ENST00000480127 H3BPC8 53 aa3.01□□□□□ -1.93
COL17A1-205ENST00000480127 SPTSSBQ8NFR3 76 aa3□□□□□ -1.93
COL17A1-205ENST00000480127 CHKB-CPT1BH3BT56 60 aa2.99□□□□□ -1.93
COL17A1-205ENST00000480127 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
COL17A1-205ENST00000480127 OCR1Q9BZK8 76 aa2.99□□□□□ -1.93
COL17A1-205ENST00000480127 P0C880 135 aa2.97□□□□□ -1.93
COL17A1-205ENST00000480127 SPRR2DP22532 72 aa2.97□□□□□ -1.93
COL17A1-205ENST00000480127 DMAC1Q96GE9 116 aa2.97□□□□□ -1.93
COL17A1-205ENST00000480127 ACYP2P14621 99 aa2.96□□□□□ -1.94
COL17A1-205ENST00000480127 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.94
COL17A1-205ENST00000480127 A0A1B0GV90 55 aa2.95□□□□□ -1.94
COL17A1-205ENST00000480127 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
COL17A1-205ENST00000480127 MT1XP80297 61 aa2.94□□□□□ -1.94
COL17A1-205ENST00000480127 TRAV7A0A075B6U4 112 aa2.93□□□□□ -1.94
COL17A1-205ENST00000480127 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
COL17A1-205ENST00000480127 KRTAP12-2P59991 146 aa2.91□□□□□ -1.94
COL17A1-205ENST00000480127 SMIM20Q8N5G0 67 aa2.91□□□□□ -1.94
COL17A1-205ENST00000480127 CAMK2N1Q7Z7J9 78 aa2.88□□□□□ -1.95
COL17A1-205ENST00000480127 K7ERU9 68 aa2.86□□□□□ -1.95
COL17A1-205ENST00000480127 SEC61GP60059 68 aa2.85□□□□□ -1.95
COL17A1-205ENST00000480127 SNURFQ9Y675 71 aa2.85□□□□□ -1.95
COL17A1-205ENST00000480127 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
COL17A1-205ENST00000480127 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
COL17A1-205ENST00000480127 KRTAP10-7P60409 375 aaPredicted RBP2.82□□□□□ -1.96
COL17A1-205ENST00000480127 SERP1Q9Y6X1 66 aa2.81□□□□□ -1.96
COL17A1-205ENST00000480127 A0A0D9SG42 100 aa2.79□□□□□ -1.96
COL17A1-205ENST00000480127 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
COL17A1-205ENST00000480127 SPANXA2-OT1Q8N9U9 137 aa2.77□□□□□ -1.97
COL17A1-205ENST00000480127 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
COL17A1-205ENST00000480127 SERP2Q8N6R1 65 aa2.75□□□□□ -1.97
COL17A1-205ENST00000480127 COA5Q86WW8 74 aa2.74□□□□□ -1.97
COL17A1-205ENST00000480127 KRTAP13-4Q3LI77 160 aa2.71□□□□□ -1.98
COL17A1-205ENST00000480127 A0A1B0GU33 70 aa2.7□□□□□ -1.98
COL17A1-205ENST00000480127 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
COL17A1-205ENST00000480127 SMIM26A0A096LP01 95 aa2.66□□□□□ -1.98
COL17A1-205ENST00000480127 A0A1B0GU69 56 aa2.66□□□□□ -1.98
COL17A1-205ENST00000480127 H3BS24 57 aa2.66□□□□□ -1.98
COL17A1-205ENST00000480127 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
COL17A1-205ENST00000480127 COX7CP15954 63 aa2.64□□□□□ -1.99
COL17A1-205ENST00000480127 KRTAP19-7Q3SYF9 63 aa2.64□□□□□ -1.99
COL17A1-205ENST00000480127 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
COL17A1-205ENST00000480127 MT4P47944 62 aa2.63□□□□□ -1.99
COL17A1-205ENST00000480127 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
COL17A1-205ENST00000480127 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
COL17A1-205ENST00000480127 CYSTM1Q9H1C7 97 aa2.63□□□□□ -1.99
COL17A1-205ENST00000480127 MT1EP04732 61 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms