RNA–Protein interactions for RNA: ENST00000478731.1

PSME4-207, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-207ENST00000478731 DNAH8Q96JB1 4490 aa0.21□□□□□ -2.38
PSME4-207ENST00000478731 A8MTW9 85 aa0.21□□□□□ -2.38
PSME4-207ENST00000478731 ITPR3Q14573 2671 aa0.21□□□□□ -2.38
PSME4-207ENST00000478731 FAT3Q8TDW7 4589 aa0.21□□□□□ -2.38
PSME4-207ENST00000478731 SVEP1Q4LDE5 3571 aa0.21□□□□□ -2.38
PSME4-207ENST00000478731 SPTBN5Q9NRC6 3674 aaKnown RBP0.2□□□□□ -2.38
PSME4-207ENST00000478731 H3BNG1 76 aa0.2□□□□□ -2.38
PSME4-207ENST00000478731 NBEAL1Q6ZS30 2694 aa0.2□□□□□ -2.38
PSME4-207ENST00000478731 LAMA5O15230 3695 aa0.19□□□□□ -2.38
PSME4-207ENST00000478731 MXRA5Q9NR99 2828 aa0.19□□□□□ -2.38
PSME4-207ENST00000478731 WDR87Q6ZQQ6 2873 aa0.19□□□□□ -2.38
PSME4-207ENST00000478731 M0QZ58 72 aa0.19□□□□□ -2.38
PSME4-207ENST00000478731 SPRR2AP35326 72 aa0.19□□□□□ -2.38
PSME4-207ENST00000478731 CLPSL2Q6UWE3 100 aa0.19□□□□□ -2.38
PSME4-207ENST00000478731 LRP2P98164 4655 aa0.18□□□□□ -2.38
PSME4-207ENST00000478731 TNP1P09430 55 aa0.18□□□□□ -2.38
PSME4-207ENST00000478731 KRTAP6-2Q3LI66 62 aa0.18□□□□□ -2.38
PSME4-207ENST00000478731 ITPR1Q14643 2758 aa0.18□□□□□ -2.38
PSME4-207ENST00000478731 CMYA5Q8N3K9 4069 aa0.18□□□□□ -2.38
PSME4-207ENST00000478731 SPTAN1Q13813 2472 aaKnown RBP0.18□□□□□ -2.38
PSME4-207ENST00000478731 MGAQ8IWI9 3026 aa0.17□□□□□ -2.38
PSME4-207ENST00000478731 LAMA1P25391 3075 aa0.17□□□□□ -2.38
PSME4-207ENST00000478731 POLR2KP53803 58 aaKnown RBP0.17□□□□□ -2.38
PSME4-207ENST00000478731 ZFHX4Q86UP3 3567 aa0.17□□□□□ -2.38
PSME4-207ENST00000478731 MGAM2Q2M2H8 2515 aa0.17□□□□□ -2.38
PSME4-207ENST00000478731 DNAH10Q8IVF4 4471 aa0.17□□□□□ -2.38
PSME4-207ENST00000478731 DMXL2Q8TDJ6 3036 aa0.16□□□□□ -2.38
PSME4-207ENST00000478731 LAMA3Q16787 3333 aa0.16□□□□□ -2.38
PSME4-207ENST00000478731 RPL39P62891 51 aaKnown RBP0.16□□□□□ -2.38
PSME4-207ENST00000478731 MUC5ACP98088 5654 aa0.16□□□□□ -2.38
PSME4-207ENST00000478731 ADGRG4Q8IZF6 3080 aa0.16□□□□□ -2.38
PSME4-207ENST00000478731 C5orf42Q9H799 3197 aa0.15□□□□□ -2.39
PSME4-207ENST00000478731 MT1AP04731 61 aa0.15□□□□□ -2.39
PSME4-207ENST00000478731 SPRR2EP22531 72 aa0.15□□□□□ -2.39
PSME4-207ENST00000478731 DEFB110Q30KQ9 67 aa0.15□□□□□ -2.39
PSME4-207ENST00000478731 RELNP78509 3460 aa0.15□□□□□ -2.39
PSME4-207ENST00000478731 TRIOO75962 3097 aa0.15□□□□□ -2.39
PSME4-207ENST00000478731 CFAP54Q96N23 3096 aa0.15□□□□□ -2.39
PSME4-207ENST00000478731 FAT1Q14517 4588 aa0.14□□□□□ -2.39
PSME4-207ENST00000478731 DOPEY1Q5JWR5 2465 aa0.14□□□□□ -2.39
PSME4-207ENST00000478731 KMT2DO14686 5537 aa0.14□□□□□ -2.39
PSME4-207ENST00000478731 TRRAPQ9Y4A5 3859 aa0.13□□□□□ -2.39
PSME4-207ENST00000478731 CEP250Q9BV73 2442 aa0.13□□□□□ -2.39
PSME4-207ENST00000478731 KRTAP8-1Q8IUC2 63 aa0.13□□□□□ -2.39
PSME4-207ENST00000478731 RPL39LQ96EH5 51 aaKnown RBP0.13□□□□□ -2.39
PSME4-207ENST00000478731 SPRR2FQ96RM1 72 aa0.13□□□□□ -2.39
PSME4-207ENST00000478731 LRBAP50851 2863 aa0.13□□□□□ -2.39
PSME4-207ENST00000478731 TEX15Q9BXT5 2789 aa0.12□□□□□ -2.39
PSME4-207ENST00000478731 CSMD1Q96PZ7 3565 aa0.12□□□□□ -2.39
PSME4-207ENST00000478731 ATMQ13315 3056 aa0.11□□□□□ -2.39
PSME4-207ENST00000478731 KRTAP19-5Q3LI72 72 aa0.11□□□□□ -2.39
PSME4-207ENST00000478731 PLECQ15149 4684 aaKnown RBP0.11□□□□□ -2.39
PSME4-207ENST00000478731 DNAH17Q9UFH2 4485 aa0.11□□□□□ -2.39
PSME4-207ENST00000478731 TOMM7Q9P0U1 55 aa0.09□□□□□ -2.4
PSME4-207ENST00000478731 PCLOQ9Y6V0 5065 aa0.09□□□□□ -2.4
PSME4-207ENST00000478731 GPR98Q8WXG9 6306 aa0.08□□□□□ -2.4
PSME4-207ENST00000478731 PRUNE2Q8WUY3 3088 aa0.08□□□□□ -2.4
PSME4-207ENST00000478731 TLN1Q9Y490 2541 aaKnown RBP0.08□□□□□ -2.4
PSME4-207ENST00000478731 LEAP2Q969E1 77 aa0.08□□□□□ -2.4
PSME4-207ENST00000478731 SRCAPQ6ZRS2 3230 aa0.08□□□□□ -2.4
PSME4-207ENST00000478731 MYO9AB2RTY4 2548 aa0.08□□□□□ -2.4
PSME4-207ENST00000478731 CFAP46Q8IYW2 2715 aa0.07□□□□□ -2.4
PSME4-207ENST00000478731 HERC1Q15751 4861 aa0.07□□□□□ -2.4
PSME4-207ENST00000478731 SMR3BP02814 79 aaPredicted RBP0.07□□□□□ -2.4
PSME4-207ENST00000478731 FRYLO94915 3013 aa0.07□□□□□ -2.4
PSME4-207ENST00000478731 DYNC1H1Q14204 4646 aaKnown RBP0.07□□□□□ -2.4
PSME4-207ENST00000478731 MUC17Q685J3 4493 aa0.07□□□□□ -2.4
PSME4-207ENST00000478731 MUC2Q02817 5179 aa0.06□□□□□ -2.4
PSME4-207ENST00000478731 DNAH5Q8TE73 4624 aa0.06□□□□□ -2.4
PSME4-207ENST00000478731 SSPOA2VEC9 5147 aa0.06□□□□□ -2.4
PSME4-207ENST00000478731 SPART-AS1P0CW21 52 aa0.06□□□□□ -2.4
PSME4-207ENST00000478731 ARHGAP5-AS1Q96IT6 56 aa0.06□□□□□ -2.4
PSME4-207ENST00000478731 STARD9Q9P2P6 4700 aa0.05□□□□□ -2.4
PSME4-207ENST00000478731 NIPBLQ6KC79 2804 aaeCLIP0.05□□□□□ -2.4
PSME4-207ENST00000478731 SMG1Q96Q15 3661 aaKnown RBP0.05□□□□□ -2.4
PSME4-207ENST00000478731 MACF1Q9UPN3 7388 aaKnown RBP0.04□□□□□ -2.4
PSME4-207ENST00000478731 ITPR2Q14571 2701 aa0.04□□□□□ -2.4
PSME4-207ENST00000478731 UBR4Q5T4S7 5183 aa0.04□□□□□ -2.4
PSME4-207ENST00000478731 MUC12Q9UKN1 5478 aa0.03□□□□□ -2.4
PSME4-207ENST00000478731 KMT2CQ8NEZ4 4911 aaKnown RBP0.03□□□□□ -2.4
PSME4-207ENST00000478731 DNAH12Q6ZR08 3092 aa0.03□□□□□ -2.4
PSME4-207ENST00000478731 RYR1P21817 5038 aa0.03□□□□□ -2.4
PSME4-207ENST00000478731 LINC01590Q5TEZ4 76 aa0.03□□□□□ -2.4
PSME4-207ENST00000478731 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
PSME4-207ENST00000478731 VPS13CQ709C8 3753 aa0.02□□□□□ -2.41
PSME4-207ENST00000478731 EYSQ5T1H1 3165 aa0.01□□□□□ -2.41
PSME4-207ENST00000478731 DSTQ03001 7570 aaKnown RBP0.01□□□□□ -2.41
PSME4-207ENST00000478731 DEFB1P60022 68 aa0.01□□□□□ -2.41
PSME4-207ENST00000478731 MUC3AQ02505 3323 aa0.01□□□□□ -2.41
PSME4-207ENST00000478731 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
PSME4-207ENST00000478731 FSIP2Q5CZC0 6907 aa0.01□□□□□ -2.41
PSME4-207ENST00000478731 LAMA2P24043 3122 aaKnown RBP0□□□□□ -2.41
PSME4-207ENST00000478731 PRCDQ00LT1 54 aa0□□□□□ -2.41
PSME4-207ENST00000478731 RNF213Q63HN8 5207 aa0□□□□□ -2.41
PSME4-207ENST00000478731 CEP295Q9C0D2 2601 aa0□□□□□ -2.41
PSME4-207ENST00000478731 DNHD1Q96M86 4753 aa-0.01□□□□□ -2.41
PSME4-207ENST00000478731 DMDP11532 3685 aa-0.01□□□□□ -2.41
PSME4-207ENST00000478731 USH2AO75445 5202 aa-0.01□□□□□ -2.41
PSME4-207ENST00000478731 MT1HP80294 61 aa-0.01□□□□□ -2.41
PSME4-207ENST00000478731 KRTAP19-7Q3SYF9 63 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms