RNA–Protein interactions for RNA: ENST00000478731.1

PSME4-207, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-207ENST00000478731 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
PSME4-207ENST00000478731 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
PSME4-207ENST00000478731 SENP3Q9H4L4 574 aaPredicted RBP20.28■□□□□ 0.84
PSME4-207ENST00000478731 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
PSME4-207ENST00000478731 FOXD1Q16676 465 aa18.85■□□□□ 0.61
PSME4-207ENST00000478731 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
PSME4-207ENST00000478731 MSH5O43196 834 aa17.74■□□□□ 0.43
PSME4-207ENST00000478731 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
PSME4-207ENST00000478731 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
PSME4-207ENST00000478731 ADRA2BP18089 450 aa17.5■□□□□ 0.39
PSME4-207ENST00000478731 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
PSME4-207ENST00000478731 SCAF1Q9H7N4 1312 aaKnown RBP16.1■□□□□ 0.17
PSME4-207ENST00000478731 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
PSME4-207ENST00000478731 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
PSME4-207ENST00000478731 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
PSME4-207ENST00000478731 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
PSME4-207ENST00000478731 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
PSME4-207ENST00000478731 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
PSME4-207ENST00000478731 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
PSME4-207ENST00000478731 CACNB1Q02641 598 aaPredicted RBP15.25■□□□□ 0.03
PSME4-207ENST00000478731 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
PSME4-207ENST00000478731 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
PSME4-207ENST00000478731 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
PSME4-207ENST00000478731 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
PSME4-207ENST00000478731 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
PSME4-207ENST00000478731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
PSME4-207ENST00000478731 KCNA4P22459 653 aa14.49□□□□□ -0.09
PSME4-207ENST00000478731 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
PSME4-207ENST00000478731 CAPN15O75808 1086 aa14.2□□□□□ -0.14
PSME4-207ENST00000478731 SPINK5Q9NQ38 1064 aaPredicted RBP14.18□□□□□ -0.14
PSME4-207ENST00000478731 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
PSME4-207ENST00000478731 DSG3P32926 999 aa14.1□□□□□ -0.15
PSME4-207ENST00000478731 APLP2Q06481 763 aa14.06□□□□□ -0.16
PSME4-207ENST00000478731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
PSME4-207ENST00000478731 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
PSME4-207ENST00000478731 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
PSME4-207ENST00000478731 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
PSME4-207ENST00000478731 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
PSME4-207ENST00000478731 ABCB7O75027 752 aa13.84□□□□□ -0.19
PSME4-207ENST00000478731 MYCNP04198 464 aaPredicted RBP13.77□□□□□ -0.21
PSME4-207ENST00000478731 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
PSME4-207ENST00000478731 POTEHQ6S545 545 aa13.62□□□□□ -0.23
PSME4-207ENST00000478731 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
PSME4-207ENST00000478731 POLA2Q14181 598 aa13.54□□□□□ -0.24
PSME4-207ENST00000478731 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
PSME4-207ENST00000478731 ATF5Q9Y2D1 282 aaPredicted RBP13.38□□□□□ -0.27
PSME4-207ENST00000478731 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
PSME4-207ENST00000478731 ZBTB22O15209 634 aa13.3□□□□□ -0.28
PSME4-207ENST00000478731 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
PSME4-207ENST00000478731 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
PSME4-207ENST00000478731 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
PSME4-207ENST00000478731 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
PSME4-207ENST00000478731 REM2Q8IYK8 340 aaPredicted RBP13.02□□□□□ -0.33
PSME4-207ENST00000478731 FBLN2P98095 1184 aa12.96□□□□□ -0.33
PSME4-207ENST00000478731 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
PSME4-207ENST00000478731 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
PSME4-207ENST00000478731 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
PSME4-207ENST00000478731 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
PSME4-207ENST00000478731 PIP4P2Q8N4L2 257 aa12.87□□□□□ -0.35
PSME4-207ENST00000478731 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.364e-11■■■■■ 28.7
PSME4-207ENST00000478731 MKRN4PQ13434 485 aaPredicted RBP12.78□□□□□ -0.36
PSME4-207ENST00000478731 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
PSME4-207ENST00000478731 SP7Q8TDD2 431 aaPredicted RBP12.75□□□□□ -0.37
PSME4-207ENST00000478731 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
PSME4-207ENST00000478731 SPDYE1Q8NFV5 336 aaPredicted RBP12.68□□□□□ -0.38
PSME4-207ENST00000478731 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
PSME4-207ENST00000478731 HAX1O00165 279 aa12.67□□□□□ -0.38
PSME4-207ENST00000478731 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
PSME4-207ENST00000478731 CLEC11AQ9Y240 323 aa12.64□□□□□ -0.39
PSME4-207ENST00000478731 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
PSME4-207ENST00000478731 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
PSME4-207ENST00000478731 EVX2Q03828 476 aa12.44□□□□□ -0.42
PSME4-207ENST00000478731 PRR29P0C7W0 189 aa12.43□□□□□ -0.42
PSME4-207ENST00000478731 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
PSME4-207ENST00000478731 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
PSME4-207ENST00000478731 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
PSME4-207ENST00000478731 GABBR2O75899 941 aa12.2□□□□□ -0.46
PSME4-207ENST00000478731 SPDYE4A6NLX3 237 aa12.18□□□□□ -0.46
PSME4-207ENST00000478731 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
PSME4-207ENST00000478731 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
PSME4-207ENST00000478731 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
PSME4-207ENST00000478731 CLCN6P51797 869 aa12.05□□□□□ -0.48
PSME4-207ENST00000478731 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
PSME4-207ENST00000478731 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
PSME4-207ENST00000478731 LHX8Q68G74 356 aa11.95□□□□□ -0.5
PSME4-207ENST00000478731 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
PSME4-207ENST00000478731 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
PSME4-207ENST00000478731 DCBLD2Q96PD2 775 aa11.91□□□□□ -0.5
PSME4-207ENST00000478731 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
PSME4-207ENST00000478731 PROM2Q8N271 834 aa11.86□□□□□ -0.51
PSME4-207ENST00000478731 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
PSME4-207ENST00000478731 GALR2O43603 387 aaPredicted RBP11.81□□□□□ -0.52
PSME4-207ENST00000478731 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
PSME4-207ENST00000478731 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
PSME4-207ENST00000478731 TSPYL2Q9H2G4 693 aaPredicted RBP11.65□□□□□ -0.54
PSME4-207ENST00000478731 MS4A3Q96HJ5 214 aa11.64□□□□□ -0.55
PSME4-207ENST00000478731 MIER1Q8N108 512 aa11.62□□□□□ -0.55
PSME4-207ENST00000478731 CCDC61Q9Y6R9 512 aa11.6□□□□□ -0.55
PSME4-207ENST00000478731 FKBP8Q14318 412 aa11.59□□□□□ -0.55
PSME4-207ENST00000478731 ASTLQ6HA08 431 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms