RNA–Protein interactions for RNA: ENST00000478548.1

MEN1-215, Transcript of menin 1, humanhuman

TSL 2

Gene MEN1, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1-215ENST00000478548 FCGBPQ9Y6R7 5405 aaPredicted RBP11.01□□□□□ -0.65
MEN1-215ENST00000478548 SCGB1A1P11684 91 aa11.01□□□□□ -0.65
MEN1-215ENST00000478548 H3BPC8 53 aa10.98□□□□□ -0.65
MEN1-215ENST00000478548 A8MUN3 132 aa10.93□□□□□ -0.66
MEN1-215ENST00000478548 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.92□□□□□ -0.66
MEN1-215ENST00000478548 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
MEN1-215ENST00000478548 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
MEN1-215ENST00000478548 KRTAP19-6Q3LI70 58 aa10.84□□□□□ -0.67
MEN1-215ENST00000478548 TRAV7A0A075B6U4 112 aa10.82□□□□□ -0.68
MEN1-215ENST00000478548 NDUFC1O43677 76 aa10.82□□□□□ -0.68
MEN1-215ENST00000478548 SMIM20Q8N5G0 67 aa10.8□□□□□ -0.68
MEN1-215ENST00000478548 SPRR2GQ9BYE4 73 aa10.78□□□□□ -0.68
MEN1-215ENST00000478548 DMAC1Q96GE9 116 aa10.77□□□□□ -0.69
MEN1-215ENST00000478548 KRTAP9-7A8MTY7 169 aa10.73□□□□□ -0.69
MEN1-215ENST00000478548 H0YAA0 97 aa10.73□□□□□ -0.69
MEN1-215ENST00000478548 KRTAP19-8Q3LI54 63 aa10.68□□□□□ -0.7
MEN1-215ENST00000478548 MT1BP07438 61 aa10.66□□□□□ -0.7
MEN1-215ENST00000478548 CRIPTQ9P021 101 aa10.62□□□□□ -0.71
MEN1-215ENST00000478548 ADM2Q7Z4H4 148 aa10.58□□□□□ -0.71
MEN1-215ENST00000478548 MACF1Q9UPN3 7388 aaKnown RBP10.58□□□□□ -0.72
MEN1-215ENST00000478548 SNURFQ9Y675 71 aa10.58□□□□□ -0.72
MEN1-215ENST00000478548 Q5VV11 94 aa10.57□□□□□ -0.72
MEN1-215ENST00000478548 SERP2Q8N6R1 65 aa10.56□□□□□ -0.72
MEN1-215ENST00000478548 ACYP2P14621 99 aa10.51□□□□□ -0.73
MEN1-215ENST00000478548 SYNE2Q8WXH0 6885 aaKnown RBP10.49□□□□□ -0.73
MEN1-215ENST00000478548 C20orf197Q8N268 126 aa10.49□□□□□ -0.73
MEN1-215ENST00000478548 P0C880 135 aa10.44□□□□□ -0.74
MEN1-215ENST00000478548 KRTAP3-2Q9BYR7 98 aa10.44□□□□□ -0.74
MEN1-215ENST00000478548 SPANXA2-OT1Q8N9U9 137 aa10.4□□□□□ -0.74
MEN1-215ENST00000478548 A6NN06 94 aa10.38□□□□□ -0.75
MEN1-215ENST00000478548 KRTAP10-5P60370 271 aa10.33□□□□□ -0.76
MEN1-215ENST00000478548 COX7CP15954 63 aa10.31□□□□□ -0.76
MEN1-215ENST00000478548 SPTSSBQ8NFR3 76 aa10.27□□□□□ -0.77
MEN1-215ENST00000478548 R4GN34 69 aa10.26□□□□□ -0.77
MEN1-215ENST00000478548 CHKB-CPT1BH3BT56 60 aa10.25□□□□□ -0.77
MEN1-215ENST00000478548 KRTAP6-3Q3LI67 103 aa10.22□□□□□ -0.77
MEN1-215ENST00000478548 M0QZ58 72 aa10.21□□□□□ -0.78
MEN1-215ENST00000478548 CYSTM1Q9H1C7 97 aa10.2□□□□□ -0.78
MEN1-215ENST00000478548 H7BZZ5 65 aa10.13□□□□□ -0.79
MEN1-215ENST00000478548 COA5Q86WW8 74 aa10.08□□□□□ -0.8
MEN1-215ENST00000478548 PLAC4Q8WY50 150 aa10.07□□□□□ -0.8
MEN1-215ENST00000478548 MT1XP80297 61 aa10.06□□□□□ -0.8
MEN1-215ENST00000478548 ANAPC13Q9BS18 74 aa10.04□□□□□ -0.8
MEN1-215ENST00000478548 LINC01554Q52M75 96 aa10.02□□□□□ -0.81
MEN1-215ENST00000478548 PRO2289Q9P1D8 64 aa9.94□□□□□ -0.82
MEN1-215ENST00000478548 CCDC179H3BU77 68 aa9.9□□□□□ -0.82
MEN1-215ENST00000478548 KRTAP13-4Q3LI77 160 aa9.89□□□□□ -0.83
MEN1-215ENST00000478548 MUC12Q9UKN1 5478 aa9.88□□□□□ -0.83
MEN1-215ENST00000478548 NEBP20929 6669 aa9.87□□□□□ -0.83
MEN1-215ENST00000478548 KRTAP5-9P26371 169 aa9.81□□□□□ -0.84
MEN1-215ENST00000478548 KMT2DO14686 5537 aa9.76□□□□□ -0.85
MEN1-215ENST00000478548 KRTAP12-2P59991 146 aa9.74□□□□□ -0.85
MEN1-215ENST00000478548 SEC61GP60059 68 aa9.72□□□□□ -0.85
MEN1-215ENST00000478548 SERP1Q9Y6X1 66 aa9.72□□□□□ -0.85
MEN1-215ENST00000478548 MDN1Q9NU22 5596 aa9.68□□□□□ -0.86
MEN1-215ENST00000478548 A0A1B0GU33 70 aa9.61□□□□□ -0.87
MEN1-215ENST00000478548 ATP5EP56381 51 aaPredicted RBP9.61□□□□□ -0.87
MEN1-215ENST00000478548 KRTAP10-7P60409 375 aaPredicted RBP9.6□□□□□ -0.87
MEN1-215ENST00000478548 SPATA8Q6RVD6 105 aa9.6□□□□□ -0.87
MEN1-215ENST00000478548 KRTAP10-12P60413 245 aa9.56□□□□□ -0.88
MEN1-215ENST00000478548 SPRR2FQ96RM1 72 aa9.56□□□□□ -0.88
MEN1-215ENST00000478548 KRTAP4-8A0A0G2JLE6 195 aa9.55□□□□□ -0.88
MEN1-215ENST00000478548 KRTAP8-1Q8IUC2 63 aa9.55□□□□□ -0.88
MEN1-215ENST00000478548 KRTAP4-8Q9BYQ9 185 aa9.55□□□□□ -0.88
MEN1-215ENST00000478548 A0A1B0GU69 56 aa9.53□□□□□ -0.88
MEN1-215ENST00000478548 A0A0D9SG42 100 aa9.51□□□□□ -0.89
MEN1-215ENST00000478548 TMEM258P61165 79 aa9.49□□□□□ -0.89
MEN1-215ENST00000478548 CAMK2N1Q7Z7J9 78 aa9.45□□□□□ -0.9
MEN1-215ENST00000478548 KRTAP20-1Q3LI63 56 aa9.42□□□□□ -0.9
MEN1-215ENST00000478548 KRTAP12-1P59990 96 aa9.4□□□□□ -0.9
MEN1-215ENST00000478548 SPRR2EP22531 72 aa9.39□□□□□ -0.91
MEN1-215ENST00000478548 SPRR2BP35325 72 aa9.39□□□□□ -0.91
MEN1-215ENST00000478548 SPRR2AP35326 72 aa9.39□□□□□ -0.91
MEN1-215ENST00000478548 LINC01558Q9Y6Z2 57 aa9.36□□□□□ -0.91
MEN1-215ENST00000478548 SPINT4Q6UDR6 99 aa9.35□□□□□ -0.91
MEN1-215ENST00000478548 A8MU10 97 aa9.31□□□□□ -0.92
MEN1-215ENST00000478548 SMIM26A0A096LP01 95 aa9.3□□□□□ -0.92
MEN1-215ENST00000478548 LCE1AQ5T7P2 110 aa9.29□□□□□ -0.92
MEN1-215ENST00000478548 PRR15LQ9BU68 103 aa9.28□□□□□ -0.92
MEN1-215ENST00000478548 KRTAP2-3P0C7H8 128 aa9.19□□□□□ -0.94
MEN1-215ENST00000478548 KRTAP2-4Q9BYR9 128 aa9.19□□□□□ -0.94
MEN1-215ENST00000478548 SPRR2DP22532 72 aa9.06□□□□□ -0.96
MEN1-215ENST00000478548 UQCR11O14957 56 aa9.03□□□□□ -0.96
MEN1-215ENST00000478548 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
MEN1-215ENST00000478548 C10orf95Q9H7T3 257 aa9□□□□□ -0.97
MEN1-215ENST00000478548 Q1T7F1 81 aa8.92□□□□□ -0.98
MEN1-215ENST00000478548 KRTAP2-2Q9BYT5 123 aa8.9□□□□□ -0.98
MEN1-215ENST00000478548 KRTAP2-1Q9BYU5 128 aa8.9□□□□□ -0.98
MEN1-215ENST00000478548 MT1EP04732 61 aa8.88□□□□□ -0.99
MEN1-215ENST00000478548 V9GYY9 64 aa8.88□□□□□ -0.99
MEN1-215ENST00000478548 PSPHP1O15172 72 aa8.84□□□□□ -0.99
MEN1-215ENST00000478548 MIR22HGQ0VDD5 57 aa8.84□□□□□ -0.99
MEN1-215ENST00000478548 PCP4P48539 62 aa8.81□□□□□ -1
MEN1-215ENST00000478548 KRTAP19-5Q3LI72 72 aa8.81□□□□□ -1
MEN1-215ENST00000478548 LCE3BQ5TA77 95 aa8.81□□□□□ -1
MEN1-215ENST00000478548 TNP1P09430 55 aa8.8□□□□□ -1
MEN1-215ENST00000478548 LCE5AQ5TCM9 118 aa8.76□□□□□ -1.01
MEN1-215ENST00000478548 LCE3AQ5TA76 89 aa8.74□□□□□ -1.01
MEN1-215ENST00000478548 KRTAP19-3Q7Z4W3 81 aa8.73□□□□□ -1.01
MEN1-215ENST00000478548 RPS28P62857 69 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms