RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 OCR1Q9BZK8 76 aa10.38□□□□□ -0.75
TRAF4-211ENST00000478021 KLKP1Q107X0 134 aa10.34□□□□□ -0.75
TRAF4-211ENST00000478021 MP68P56378 58 aa10.32□□□□□ -0.76
TRAF4-211ENST00000478021 MACF1Q9UPN3 7388 aaKnown RBP10.31□□□□□ -0.76
TRAF4-211ENST00000478021 SYNE2Q8WXH0 6885 aaKnown RBP10.3□□□□□ -0.76
TRAF4-211ENST00000478021 NDUFC1O43677 76 aa10.23□□□□□ -0.77
TRAF4-211ENST00000478021 A8MUN3 132 aa10.22□□□□□ -0.77
TRAF4-211ENST00000478021 SCGB1A1P11684 91 aa10.22□□□□□ -0.77
TRAF4-211ENST00000478021 SPRR2GQ9BYE4 73 aa10.21□□□□□ -0.77
TRAF4-211ENST00000478021 MT1BP07438 61 aa10.17□□□□□ -0.78
TRAF4-211ENST00000478021 H3BPC8 53 aa10.16□□□□□ -0.78
TRAF4-211ENST00000478021 Q5VV11 94 aa10.16□□□□□ -0.78
TRAF4-211ENST00000478021 IMUPQ9GZP8 106 aa10.16□□□□□ -0.78
TRAF4-211ENST00000478021 KRTAP19-8Q3LI54 63 aa10.14□□□□□ -0.79
TRAF4-211ENST00000478021 MT-ATP8P03928 68 aa10.13□□□□□ -0.79
TRAF4-211ENST00000478021 K7ERU9 68 aa10.09□□□□□ -0.79
TRAF4-211ENST00000478021 H0YAA0 97 aa10.07□□□□□ -0.8
TRAF4-211ENST00000478021 CRIPTQ9P021 101 aa10.06□□□□□ -0.8
TRAF4-211ENST00000478021 ADM2Q7Z4H4 148 aa10.03□□□□□ -0.8
TRAF4-211ENST00000478021 DMAC1Q96GE9 116 aa10.01□□□□□ -0.81
TRAF4-211ENST00000478021 A6NN06 94 aa10□□□□□ -0.81
TRAF4-211ENST00000478021 TRAV7A0A075B6U4 112 aa9.95□□□□□ -0.82
TRAF4-211ENST00000478021 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
TRAF4-211ENST00000478021 KRTAP6-3Q3LI67 103 aa9.91□□□□□ -0.82
TRAF4-211ENST00000478021 KRTAP10-5P60370 271 aa9.89□□□□□ -0.83
TRAF4-211ENST00000478021 P0C880 135 aa9.83□□□□□ -0.84
TRAF4-211ENST00000478021 ACYP2P14621 99 aa9.78□□□□□ -0.84
TRAF4-211ENST00000478021 SNURFQ9Y675 71 aa9.78□□□□□ -0.84
TRAF4-211ENST00000478021 C20orf197Q8N268 126 aa9.75□□□□□ -0.85
TRAF4-211ENST00000478021 R4GN34 69 aa9.75□□□□□ -0.85
TRAF4-211ENST00000478021 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
TRAF4-211ENST00000478021 NEBP20929 6669 aa9.71□□□□□ -0.86
TRAF4-211ENST00000478021 M0QZ58 72 aa9.7□□□□□ -0.86
TRAF4-211ENST00000478021 MUC12Q9UKN1 5478 aa9.69□□□□□ -0.86
TRAF4-211ENST00000478021 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
TRAF4-211ENST00000478021 SERP2Q8N6R1 65 aa9.64□□□□□ -0.87
TRAF4-211ENST00000478021 SPTSSBQ8NFR3 76 aa9.63□□□□□ -0.87
TRAF4-211ENST00000478021 PLAC4Q8WY50 150 aa9.63□□□□□ -0.87
TRAF4-211ENST00000478021 LINC01554Q52M75 96 aa9.58□□□□□ -0.88
TRAF4-211ENST00000478021 SPANXA2-OT1Q8N9U9 137 aa9.57□□□□□ -0.88
TRAF4-211ENST00000478021 MT1XP80297 61 aa9.56□□□□□ -0.88
TRAF4-211ENST00000478021 PRO2289Q9P1D8 64 aa9.54□□□□□ -0.88
TRAF4-211ENST00000478021 KRTAP5-9P26371 169 aa9.39□□□□□ -0.91
TRAF4-211ENST00000478021 COX7CP15954 63 aa9.38□□□□□ -0.91
TRAF4-211ENST00000478021 COA5Q86WW8 74 aa9.35□□□□□ -0.91
TRAF4-211ENST00000478021 MDN1Q9NU22 5596 aa9.34□□□□□ -0.91
TRAF4-211ENST00000478021 KMT2DO14686 5537 aa9.33□□□□□ -0.92
TRAF4-211ENST00000478021 KRTAP20-1Q3LI63 56 aa9.33□□□□□ -0.92
TRAF4-211ENST00000478021 CYSTM1Q9H1C7 97 aa9.28□□□□□ -0.92
TRAF4-211ENST00000478021 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
TRAF4-211ENST00000478021 KRTAP13-4Q3LI77 160 aa9.25□□□□□ -0.93
TRAF4-211ENST00000478021 H7BZZ5 65 aa9.22□□□□□ -0.93
TRAF4-211ENST00000478021 KRTAP8-1Q8IUC2 63 aa9.19□□□□□ -0.94
TRAF4-211ENST00000478021 SPRR2FQ96RM1 72 aa9.19□□□□□ -0.94
TRAF4-211ENST00000478021 KRTAP10-7P60409 375 aaPredicted RBP9.15□□□□□ -0.94
TRAF4-211ENST00000478021 KRTAP4-8A0A0G2JLE6 195 aa9.13□□□□□ -0.95
TRAF4-211ENST00000478021 ANAPC13Q9BS18 74 aa9.13□□□□□ -0.95
TRAF4-211ENST00000478021 KRTAP4-8Q9BYQ9 185 aa9.13□□□□□ -0.95
TRAF4-211ENST00000478021 SEC61GP60059 68 aa9.1□□□□□ -0.95
TRAF4-211ENST00000478021 SERP1Q9Y6X1 66 aa9.09□□□□□ -0.95
TRAF4-211ENST00000478021 KRTAP10-12P60413 245 aa9.06□□□□□ -0.96
TRAF4-211ENST00000478021 SPRR2EP22531 72 aa9.04□□□□□ -0.96
TRAF4-211ENST00000478021 SPRR2BP35325 72 aa9.04□□□□□ -0.96
TRAF4-211ENST00000478021 SPRR2AP35326 72 aa9.04□□□□□ -0.96
TRAF4-211ENST00000478021 CAMK2N1Q7Z7J9 78 aa9□□□□□ -0.97
TRAF4-211ENST00000478021 A0A0D9SG42 100 aa8.99□□□□□ -0.97
TRAF4-211ENST00000478021 KRTAP2-3P0C7H8 128 aa8.99□□□□□ -0.97
TRAF4-211ENST00000478021 SPATA8Q6RVD6 105 aa8.99□□□□□ -0.97
TRAF4-211ENST00000478021 KRTAP2-4Q9BYR9 128 aa8.99□□□□□ -0.97
TRAF4-211ENST00000478021 CCDC179H3BU77 68 aa8.97□□□□□ -0.97
TRAF4-211ENST00000478021 A0A1B0GU33 70 aa8.95□□□□□ -0.98
TRAF4-211ENST00000478021 LCE1AQ5T7P2 110 aa8.91□□□□□ -0.98
TRAF4-211ENST00000478021 A0A1B0GU69 56 aa8.85□□□□□ -0.99
TRAF4-211ENST00000478021 SPINT4Q6UDR6 99 aa8.85□□□□□ -0.99
TRAF4-211ENST00000478021 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
TRAF4-211ENST00000478021 ATP5EP56381 51 aaPredicted RBP8.76□□□□□ -1.01
TRAF4-211ENST00000478021 SPRR2DP22532 72 aa8.73□□□□□ -1.01
TRAF4-211ENST00000478021 A8MU10 97 aa8.69□□□□□ -1.02
TRAF4-211ENST00000478021 KRTAP2-2Q9BYT5 123 aa8.69□□□□□ -1.02
TRAF4-211ENST00000478021 KRTAP2-1Q9BYU5 128 aa8.69□□□□□ -1.02
TRAF4-211ENST00000478021 SMIM26A0A096LP01 95 aa8.68□□□□□ -1.02
TRAF4-211ENST00000478021 PRR15LQ9BU68 103 aa8.59□□□□□ -1.03
TRAF4-211ENST00000478021 TMEM258P61165 79 aa8.58□□□□□ -1.04
TRAF4-211ENST00000478021 LINC01558Q9Y6Z2 57 aa8.56□□□□□ -1.04
TRAF4-211ENST00000478021 KRTAP19-7Q3SYF9 63 aa8.54□□□□□ -1.04
TRAF4-211ENST00000478021 LCE3BQ5TA77 95 aa8.47□□□□□ -1.05
TRAF4-211ENST00000478021 MT1EP04732 61 aa8.46□□□□□ -1.06
TRAF4-211ENST00000478021 C10orf95Q9H7T3 257 aa8.39□□□□□ -1.07
TRAF4-211ENST00000478021 KRTAP19-5Q3LI72 72 aa8.38□□□□□ -1.07
TRAF4-211ENST00000478021 LCE5AQ5TCM9 118 aa8.35□□□□□ -1.07
TRAF4-211ENST00000478021 KRTAP19-3Q7Z4W3 81 aa8.35□□□□□ -1.07
TRAF4-211ENST00000478021 UQCR11O14957 56 aa8.32□□□□□ -1.08
TRAF4-211ENST00000478021 TNP1P09430 55 aa8.31□□□□□ -1.08
TRAF4-211ENST00000478021 LCE3AQ5TA76 89 aa8.27□□□□□ -1.09
TRAF4-211ENST00000478021 DSTQ03001 7570 aaKnown RBP8.17□□□□□ -1.1
TRAF4-211ENST00000478021 MIR22HGQ0VDD5 57 aa8.16□□□□□ -1.1
TRAF4-211ENST00000478021 MT1GP13640 62 aa8.15□□□□□ -1.1
TRAF4-211ENST00000478021 PSPHP1O15172 72 aa8.11□□□□□ -1.11
TRAF4-211ENST00000478021 MT1LQ93083 61 aa8.11□□□□□ -1.11
TRAF4-211ENST00000478021 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms