RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 LINC00304Q8N9R0 145 aa3.41□□□□□ -1.86
TRA2B-211ENST00000477939 Q96NJ1 140 aa3.41□□□□□ -1.86
TRA2B-211ENST00000477939 A0A1W2PNN7 141 aa3.4□□□□□ -1.87
TRA2B-211ENST00000477939 SSBP3-AS1Q7Z2R9 100 aa3.4□□□□□ -1.87
TRA2B-211ENST00000477939 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
TRA2B-211ENST00000477939 Q8N377 158 aa3.39□□□□□ -1.87
TRA2B-211ENST00000477939 FAM168BA1KXE4 195 aa3.38□□□□□ -1.87
TRA2B-211ENST00000477939 PSORS1C2Q9UIG4 136 aa3.38□□□□□ -1.87
TRA2B-211ENST00000477939 A0A0G2JQZ4 141 aa3.37□□□□□ -1.87
TRA2B-211ENST00000477939 MUC2Q02817 5179 aa3.36□□□□□ -1.87
TRA2B-211ENST00000477939 DEFB116Q30KQ4 102 aa3.35□□□□□ -1.87
TRA2B-211ENST00000477939 KRTAP7-1Q8IUC3 87 aa3.35□□□□□ -1.87
TRA2B-211ENST00000477939 MMP24-AS1A0A0U1RRL7 71 aa3.34□□□□□ -1.87
TRA2B-211ENST00000477939 KRTAP1-4P0C5Y4 121 aa3.34□□□□□ -1.87
TRA2B-211ENST00000477939 UNQ6190/PRO20217Q6UXQ8 127 aa3.34□□□□□ -1.87
TRA2B-211ENST00000477939 COX6B2Q6YFQ2 88 aa3.32□□□□□ -1.88
TRA2B-211ENST00000477939 DEFB105AQ8NG35 78 aa3.32□□□□□ -1.88
TRA2B-211ENST00000477939 MRPL34Q9BQ48 92 aaKnown RBP3.32□□□□□ -1.88
TRA2B-211ENST00000477939 Q6ZRX8 168 aa3.31□□□□□ -1.88
TRA2B-211ENST00000477939 PRO2289Q9P1D8 64 aa3.31□□□□□ -1.88
TRA2B-211ENST00000477939 CRIPTQ9P021 101 aa3.3□□□□□ -1.88
TRA2B-211ENST00000477939 FAT4Q6V0I7 4981 aa3.27□□□□□ -1.89
TRA2B-211ENST00000477939 IGFL1Q6UW32 110 aa3.27□□□□□ -1.89
TRA2B-211ENST00000477939 SPRR1AP35321 89 aa3.25□□□□□ -1.89
TRA2B-211ENST00000477939 KRTAP13-1Q8IUC0 172 aa3.24□□□□□ -1.89
TRA2B-211ENST00000477939 KRTAP13-2Q52LG2 175 aa3.23□□□□□ -1.89
TRA2B-211ENST00000477939 LCE2AQ5TA79 106 aaPredicted RBP3.23□□□□□ -1.89
TRA2B-211ENST00000477939 TYMSOSQ8TAI1 123 aa3.23□□□□□ -1.89
TRA2B-211ENST00000477939 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
TRA2B-211ENST00000477939 KRTAP9-2Q9BYQ4 174 aa3.22□□□□□ -1.89
TRA2B-211ENST00000477939 MUC17Q685J3 4493 aa3.22□□□□□ -1.89
TRA2B-211ENST00000477939 H0YAA0 97 aa3.21□□□□□ -1.9
TRA2B-211ENST00000477939 PRLHP81277 87 aa3.21□□□□□ -1.9
TRA2B-211ENST00000477939 SPRR1BP22528 89 aa3.19□□□□□ -1.9
TRA2B-211ENST00000477939 TPRXLQ17RH7 258 aa3.19□□□□□ -1.9
TRA2B-211ENST00000477939 H1FX-AS1Q4G0G2 97 aa3.19□□□□□ -1.9
TRA2B-211ENST00000477939 INE1O15225 51 aa3.18□□□□□ -1.9
TRA2B-211ENST00000477939 R4GN34 69 aa3.18□□□□□ -1.9
TRA2B-211ENST00000477939 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
TRA2B-211ENST00000477939 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
TRA2B-211ENST00000477939 IGKV2D-30A0A075B6S6 120 aa3.15□□□□□ -1.91
TRA2B-211ENST00000477939 IGKV2-30P06310 120 aa3.14□□□□□ -1.91
TRA2B-211ENST00000477939 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
TRA2B-211ENST00000477939 KRTAP4-1Q9BYQ7 146 aa3.11□□□□□ -1.91
TRA2B-211ENST00000477939 FSIP2Q5CZC0 6907 aa3.1□□□□□ -1.91
TRA2B-211ENST00000477939 SPINK1P00995 79 aa3.09□□□□□ -1.91
TRA2B-211ENST00000477939 RPS29P62273 56 aaKnown RBP3.08□□□□□ -1.92
TRA2B-211ENST00000477939 XP32Q5T750 250 aa3.06□□□□□ -1.92
TRA2B-211ENST00000477939 LCE2CQ5TA81 110 aa3.05□□□□□ -1.92
TRA2B-211ENST00000477939 LCE2DQ5TA82 110 aaPredicted RBP3.05□□□□□ -1.92
TRA2B-211ENST00000477939 KRTAP19-2Q3LHN2 52 aa3.04□□□□□ -1.92
TRA2B-211ENST00000477939 CRCT1Q9UGL9 99 aa3.02□□□□□ -1.93
TRA2B-211ENST00000477939 MT1HP80294 61 aa3.01□□□□□ -1.93
TRA2B-211ENST00000477939 FLGP20930 4061 aaPredicted RBP3□□□□□ -1.93
TRA2B-211ENST00000477939 C9orf92A6NGG3 77 aa2.99□□□□□ -1.93
TRA2B-211ENST00000477939 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
TRA2B-211ENST00000477939 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
TRA2B-211ENST00000477939 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
TRA2B-211ENST00000477939 LORP23490 312 aaPredicted RBP2.97□□□□□ -1.93
TRA2B-211ENST00000477939 KRTAP10-6P60371 365 aaPredicted RBP2.96□□□□□ -1.94
TRA2B-211ENST00000477939 M0R2T5 61 aa2.91□□□□□ -1.94
TRA2B-211ENST00000477939 S4R3F8 94 aa2.91□□□□□ -1.94
TRA2B-211ENST00000477939 KRTAP3-2Q9BYR7 98 aa2.87□□□□□ -1.95
TRA2B-211ENST00000477939 USH2AO75445 5202 aa2.85□□□□□ -1.95
TRA2B-211ENST00000477939 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
TRA2B-211ENST00000477939 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.83□□□□□ -1.96
TRA2B-211ENST00000477939 KRTAP9-8Q9BYQ0 159 aa2.83□□□□□ -1.96
TRA2B-211ENST00000477939 KRTAP9-7A8MTY7 169 aa2.81□□□□□ -1.96
TRA2B-211ENST00000477939 A0A0D9SG42 100 aa2.8□□□□□ -1.96
TRA2B-211ENST00000477939 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
TRA2B-211ENST00000477939 KRTAP3-3Q9BYR6 98 aa2.8□□□□□ -1.96
TRA2B-211ENST00000477939 MT2AP02795 61 aa2.79□□□□□ -1.96
TRA2B-211ENST00000477939 M0QZ58 72 aa2.78□□□□□ -1.96
TRA2B-211ENST00000477939 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
TRA2B-211ENST00000477939 LCE2BO14633 110 aa2.77□□□□□ -1.97
TRA2B-211ENST00000477939 MT1FP04733 61 aa2.77□□□□□ -1.97
TRA2B-211ENST00000477939 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
TRA2B-211ENST00000477939 KRTAP19-1Q8IUB9 90 aa2.75□□□□□ -1.97
TRA2B-211ENST00000477939 KRTAP9-3Q9BYQ3 159 aa2.75□□□□□ -1.97
TRA2B-211ENST00000477939 KRTAP12-1P59990 96 aa2.74□□□□□ -1.97
TRA2B-211ENST00000477939 KRTAP3-1Q9BYR8 98 aa2.74□□□□□ -1.97
TRA2B-211ENST00000477939 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
TRA2B-211ENST00000477939 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
TRA2B-211ENST00000477939 KRTAP13-4Q3LI77 160 aa2.7□□□□□ -1.98
TRA2B-211ENST00000477939 KRTAP19-6Q3LI70 58 aa2.67□□□□□ -1.98
TRA2B-211ENST00000477939 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
TRA2B-211ENST00000477939 NEBP20929 6669 aa2.55□□□□□ -2
TRA2B-211ENST00000477939 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
TRA2B-211ENST00000477939 MT1BP07438 61 aa2.52□□□□□ -2.01
TRA2B-211ENST00000477939 TNP1P09430 55 aa2.49□□□□□ -2.01
TRA2B-211ENST00000477939 KRTAP19-8Q3LI54 63 aa2.48□□□□□ -2.01
TRA2B-211ENST00000477939 SPRR2GQ9BYE4 73 aa2.48□□□□□ -2.01
TRA2B-211ENST00000477939 KRTAP10-5P60370 271 aa2.47□□□□□ -2.01
TRA2B-211ENST00000477939 KMT2DO14686 5537 aa2.45□□□□□ -2.02
TRA2B-211ENST00000477939 KRTAP5-9P26371 169 aa2.45□□□□□ -2.02
TRA2B-211ENST00000477939 KRTAP20-1Q3LI63 56 aa2.45□□□□□ -2.02
TRA2B-211ENST00000477939 MDN1Q9NU22 5596 aa2.43□□□□□ -2.02
TRA2B-211ENST00000477939 KRTAP19-4Q3LI73 84 aa2.36□□□□□ -2.03
TRA2B-211ENST00000477939 KRTAP2-3P0C7H8 128 aa2.34□□□□□ -2.03
TRA2B-211ENST00000477939 MT1XP80297 61 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms