RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
HDLBP-236ENST00000477477 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
HDLBP-236ENST00000477477 TRAV7A0A075B6U4 112 aa5.29□□□□□ -1.56
HDLBP-236ENST00000477477 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
HDLBP-236ENST00000477477 C7orf65Q6ZTY9 151 aa5.28□□□□□ -1.56
HDLBP-236ENST00000477477 Q5W150 140 aa5.26□□□□□ -1.57
HDLBP-236ENST00000477477 UBL5Q9BZL1 73 aa5.25□□□□□ -1.57
HDLBP-236ENST00000477477 BPY2O14599 106 aa5.24□□□□□ -1.57
HDLBP-236ENST00000477477 H7BZZ5 65 aa5.21□□□□□ -1.58
HDLBP-236ENST00000477477 PMAIP1Q13794 54 aa5.21□□□□□ -1.58
HDLBP-236ENST00000477477 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
HDLBP-236ENST00000477477 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
HDLBP-236ENST00000477477 CASC2Q6XLA1 102 aa5.2□□□□□ -1.58
HDLBP-236ENST00000477477 C20orf197Q8N268 126 aa5.2□□□□□ -1.58
HDLBP-236ENST00000477477 CXCL6P80162 114 aa5.19□□□□□ -1.58
HDLBP-236ENST00000477477 Q8N9L7 120 aa5.19□□□□□ -1.58
HDLBP-236ENST00000477477 NEBP20929 6669 aa5.18□□□□□ -1.58
HDLBP-236ENST00000477477 A6NN06 94 aa5.15□□□□□ -1.59
HDLBP-236ENST00000477477 MT1BP07438 61 aa5.15□□□□□ -1.59
HDLBP-236ENST00000477477 KRTAP3-1Q9BYR8 98 aa5.14□□□□□ -1.59
HDLBP-236ENST00000477477 CYSTM1Q9H1C7 97 aa5.14□□□□□ -1.59
HDLBP-236ENST00000477477 Q5VV11 94 aa5.13□□□□□ -1.59
HDLBP-236ENST00000477477 S4R3F8 94 aa5.13□□□□□ -1.59
HDLBP-236ENST00000477477 KRTAP19-8Q3LI54 63 aa5.12□□□□□ -1.59
HDLBP-236ENST00000477477 A0A087WVE0 104 aa5.11□□□□□ -1.59
HDLBP-236ENST00000477477 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
HDLBP-236ENST00000477477 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
HDLBP-236ENST00000477477 Q1T7F1 81 aa5.1□□□□□ -1.59
HDLBP-236ENST00000477477 CSAG1Q6PB30 78 aa5.1□□□□□ -1.59
HDLBP-236ENST00000477477 LCA10Q71F78 164 aa5.09□□□□□ -1.59
HDLBP-236ENST00000477477 C1orf64Q8NEQ6 169 aa5.09□□□□□ -1.59
HDLBP-236ENST00000477477 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
HDLBP-236ENST00000477477 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
HDLBP-236ENST00000477477 TP53AIP1Q9HCN2 124 aa5.02□□□□□ -1.61
HDLBP-236ENST00000477477 KRTAP3-3Q9BYR6 98 aa5.01□□□□□ -1.61
HDLBP-236ENST00000477477 CYP4F30PQ9H0H9 118 aa5.01□□□□□ -1.61
HDLBP-236ENST00000477477 SNURFQ9Y675 71 aa5□□□□□ -1.61
HDLBP-236ENST00000477477 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
HDLBP-236ENST00000477477 KMT2DO14686 5537 aa4.98□□□□□ -1.61
HDLBP-236ENST00000477477 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
HDLBP-236ENST00000477477 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
HDLBP-236ENST00000477477 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
HDLBP-236ENST00000477477 H3BPC8 53 aa4.94□□□□□ -1.62
HDLBP-236ENST00000477477 OCR1Q9BZK8 76 aa4.94□□□□□ -1.62
HDLBP-236ENST00000477477 SPANXA2-OT1Q8N9U9 137 aa4.92□□□□□ -1.62
HDLBP-236ENST00000477477 TRAV22A0A0B4J277 110 aa4.9□□□□□ -1.63
HDLBP-236ENST00000477477 LOC101927531A0A1B0GV80 90 aa4.89□□□□□ -1.63
HDLBP-236ENST00000477477 H0YAA0 97 aa4.87□□□□□ -1.63
HDLBP-236ENST00000477477 MP68P56378 58 aa4.87□□□□□ -1.63
HDLBP-236ENST00000477477 CDC42SE1Q9NRR8 79 aa4.86□□□□□ -1.63
HDLBP-236ENST00000477477 CHKB-CPT1BH3BT56 60 aa4.83□□□□□ -1.64
HDLBP-236ENST00000477477 LINC00208Q96KT6 92 aa4.82□□□□□ -1.64
HDLBP-236ENST00000477477 PSPHP1O15172 72 aa4.81□□□□□ -1.64
HDLBP-236ENST00000477477 A8MUN3 132 aa4.8□□□□□ -1.64
HDLBP-236ENST00000477477 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
HDLBP-236ENST00000477477 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
HDLBP-236ENST00000477477 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
HDLBP-236ENST00000477477 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
HDLBP-236ENST00000477477 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
HDLBP-236ENST00000477477 A6NED7 52 aa4.79□□□□□ -1.64
HDLBP-236ENST00000477477 H0Y9P7 68 aa4.79□□□□□ -1.64
HDLBP-236ENST00000477477 MT1XP80297 61 aa4.79□□□□□ -1.64
HDLBP-236ENST00000477477 SPRR2EP22531 72 aa4.77□□□□□ -1.65
HDLBP-236ENST00000477477 SPRR2BP35325 72 aa4.77□□□□□ -1.65
HDLBP-236ENST00000477477 SPRR2AP35326 72 aa4.77□□□□□ -1.65
HDLBP-236ENST00000477477 SPTSSBQ8NFR3 76 aa4.76□□□□□ -1.65
HDLBP-236ENST00000477477 PRR15LQ9BU68 103 aa4.76□□□□□ -1.65
HDLBP-236ENST00000477477 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
HDLBP-236ENST00000477477 PLAC4Q8WY50 150 aa4.73□□□□□ -1.65
HDLBP-236ENST00000477477 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
HDLBP-236ENST00000477477 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
HDLBP-236ENST00000477477 LINC01554Q52M75 96 aa4.7□□□□□ -1.66
HDLBP-236ENST00000477477 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
HDLBP-236ENST00000477477 R4GN34 69 aa4.69□□□□□ -1.66
HDLBP-236ENST00000477477 H3BS24 57 aa4.67□□□□□ -1.66
HDLBP-236ENST00000477477 P0C880 135 aa4.67□□□□□ -1.66
HDLBP-236ENST00000477477 COA5Q86WW8 74 aa4.65□□□□□ -1.67
HDLBP-236ENST00000477477 M0QZ58 72 aa4.64□□□□□ -1.67
HDLBP-236ENST00000477477 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
HDLBP-236ENST00000477477 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
HDLBP-236ENST00000477477 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
HDLBP-236ENST00000477477 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
HDLBP-236ENST00000477477 SPRR2DP22532 72 aa4.61□□□□□ -1.67
HDLBP-236ENST00000477477 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
HDLBP-236ENST00000477477 DMAC1Q96GE9 116 aa4.59□□□□□ -1.67
HDLBP-236ENST00000477477 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
HDLBP-236ENST00000477477 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
HDLBP-236ENST00000477477 A8MU10 97 aa4.5□□□□□ -1.69
HDLBP-236ENST00000477477 UQCR11O14957 56 aa4.5□□□□□ -1.69
HDLBP-236ENST00000477477 ACYP2P14621 99 aa4.5□□□□□ -1.69
HDLBP-236ENST00000477477 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
HDLBP-236ENST00000477477 SPATA8Q6RVD6 105 aa4.49□□□□□ -1.69
HDLBP-236ENST00000477477 A0A1B0GU69 56 aa4.46□□□□□ -1.7
HDLBP-236ENST00000477477 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
HDLBP-236ENST00000477477 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
HDLBP-236ENST00000477477 ROMO1P60602 79 aa4.35□□□□□ -1.71
HDLBP-236ENST00000477477 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
HDLBP-236ENST00000477477 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
HDLBP-236ENST00000477477 K7ERS5 55 aa4.31□□□□□ -1.72
HDLBP-236ENST00000477477 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms