RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-208ENST00000477440 SCGB1A1P11684 91 aa11.65□□□□□ -0.54
ARHGEF3-208ENST00000477440 MT-ATP8P03928 68 aa11.64□□□□□ -0.55
ARHGEF3-208ENST00000477440 IMUPQ9GZP8 106 aa11.61□□□□□ -0.55
ARHGEF3-208ENST00000477440 A8MUN3 132 aa11.58□□□□□ -0.56
ARHGEF3-208ENST00000477440 H3BPC8 53 aa11.58□□□□□ -0.56
ARHGEF3-208ENST00000477440 FCGBPQ9Y6R7 5405 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF3-208ENST00000477440 KRTAP19-6Q3LI70 58 aa11.51□□□□□ -0.57
ARHGEF3-208ENST00000477440 NDUFC1O43677 76 aa11.5□□□□□ -0.57
ARHGEF3-208ENST00000477440 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF3-208ENST00000477440 SPRR2GQ9BYE4 73 aa11.43□□□□□ -0.58
ARHGEF3-208ENST00000477440 TRAV7A0A075B6U4 112 aa11.39□□□□□ -0.59
ARHGEF3-208ENST00000477440 SMIM20Q8N5G0 67 aa11.38□□□□□ -0.59
ARHGEF3-208ENST00000477440 DMAC1Q96GE9 116 aa11.37□□□□□ -0.59
ARHGEF3-208ENST00000477440 H0YAA0 97 aa11.34□□□□□ -0.59
ARHGEF3-208ENST00000477440 MT1BP07438 61 aa11.32□□□□□ -0.6
ARHGEF3-208ENST00000477440 KRTAP19-8Q3LI54 63 aa11.32□□□□□ -0.6
ARHGEF3-208ENST00000477440 Q5VV11 94 aa11.29□□□□□ -0.6
ARHGEF3-208ENST00000477440 CRIPTQ9P021 101 aa11.28□□□□□ -0.6
ARHGEF3-208ENST00000477440 ADM2Q7Z4H4 148 aa11.26□□□□□ -0.61
ARHGEF3-208ENST00000477440 KRTAP9-7A8MTY7 169 aa11.22□□□□□ -0.61
ARHGEF3-208ENST00000477440 SNURFQ9Y675 71 aa11.18□□□□□ -0.62
ARHGEF3-208ENST00000477440 MACF1Q9UPN3 7388 aaKnown RBP11.12□□□□□ -0.63
ARHGEF3-208ENST00000477440 ACYP2P14621 99 aa11.11□□□□□ -0.63
ARHGEF3-208ENST00000477440 SERP2Q8N6R1 65 aa11.09□□□□□ -0.63
ARHGEF3-208ENST00000477440 C20orf197Q8N268 126 aa11.07□□□□□ -0.64
ARHGEF3-208ENST00000477440 A6NN06 94 aa11.06□□□□□ -0.64
ARHGEF3-208ENST00000477440 P0C880 135 aa11.06□□□□□ -0.64
ARHGEF3-208ENST00000477440 KRTAP10-5P60370 271 aa10.99□□□□□ -0.65
ARHGEF3-208ENST00000477440 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
ARHGEF3-208ENST00000477440 SPANXA2-OT1Q8N9U9 137 aa10.95□□□□□ -0.66
ARHGEF3-208ENST00000477440 R4GN34 69 aa10.94□□□□□ -0.66
ARHGEF3-208ENST00000477440 SYNE2Q8WXH0 6885 aaKnown RBP10.91□□□□□ -0.66
ARHGEF3-208ENST00000477440 CHKB-CPT1BH3BT56 60 aa10.91□□□□□ -0.66
ARHGEF3-208ENST00000477440 SPTSSBQ8NFR3 76 aa10.91□□□□□ -0.66
ARHGEF3-208ENST00000477440 M0QZ58 72 aa10.88□□□□□ -0.67
ARHGEF3-208ENST00000477440 COX7CP15954 63 aa10.82□□□□□ -0.68
ARHGEF3-208ENST00000477440 KRTAP6-3Q3LI67 103 aa10.75□□□□□ -0.69
ARHGEF3-208ENST00000477440 PLAC4Q8WY50 150 aa10.74□□□□□ -0.69
ARHGEF3-208ENST00000477440 LINC01554Q52M75 96 aa10.72□□□□□ -0.69
ARHGEF3-208ENST00000477440 CYSTM1Q9H1C7 97 aa10.68□□□□□ -0.7
ARHGEF3-208ENST00000477440 MT1XP80297 61 aa10.67□□□□□ -0.7
ARHGEF3-208ENST00000477440 COA5Q86WW8 74 aa10.66□□□□□ -0.7
ARHGEF3-208ENST00000477440 H7BZZ5 65 aa10.62□□□□□ -0.71
ARHGEF3-208ENST00000477440 PRO2289Q9P1D8 64 aa10.62□□□□□ -0.71
ARHGEF3-208ENST00000477440 ANAPC13Q9BS18 74 aa10.56□□□□□ -0.72
ARHGEF3-208ENST00000477440 KRTAP13-4Q3LI77 160 aa10.45□□□□□ -0.74
ARHGEF3-208ENST00000477440 KMT2DO14686 5537 aa10.4□□□□□ -0.75
ARHGEF3-208ENST00000477440 CCDC179H3BU77 68 aa10.38□□□□□ -0.75
ARHGEF3-208ENST00000477440 KRTAP5-9P26371 169 aa10.38□□□□□ -0.75
ARHGEF3-208ENST00000477440 MUC12Q9UKN1 5478 aa10.38□□□□□ -0.75
ARHGEF3-208ENST00000477440 KRTAP12-2P59991 146 aa10.33□□□□□ -0.76
ARHGEF3-208ENST00000477440 SEC61GP60059 68 aa10.32□□□□□ -0.76
ARHGEF3-208ENST00000477440 SERP1Q9Y6X1 66 aa10.31□□□□□ -0.76
ARHGEF3-208ENST00000477440 NEBP20929 6669 aa10.23□□□□□ -0.77
ARHGEF3-208ENST00000477440 KRTAP10-7P60409 375 aaPredicted RBP10.2□□□□□ -0.78
ARHGEF3-208ENST00000477440 KRTAP8-1Q8IUC2 63 aa10.17□□□□□ -0.78
ARHGEF3-208ENST00000477440 A0A1B0GU33 70 aa10.16□□□□□ -0.78
ARHGEF3-208ENST00000477440 SPATA8Q6RVD6 105 aa10.16□□□□□ -0.78
ARHGEF3-208ENST00000477440 KRTAP4-8A0A0G2JLE6 195 aa10.15□□□□□ -0.78
ARHGEF3-208ENST00000477440 KRTAP4-8Q9BYQ9 185 aa10.15□□□□□ -0.78
ARHGEF3-208ENST00000477440 SPRR2FQ96RM1 72 aa10.14□□□□□ -0.79
ARHGEF3-208ENST00000477440 MDN1Q9NU22 5596 aa10.13□□□□□ -0.79
ARHGEF3-208ENST00000477440 A0A0D9SG42 100 aa10.13□□□□□ -0.79
ARHGEF3-208ENST00000477440 ATP5EP56381 51 aaPredicted RBP10.12□□□□□ -0.79
ARHGEF3-208ENST00000477440 KRTAP10-12P60413 245 aa10.12□□□□□ -0.79
ARHGEF3-208ENST00000477440 CAMK2N1Q7Z7J9 78 aa10.09□□□□□ -0.79
ARHGEF3-208ENST00000477440 A0A1B0GU69 56 aa10.08□□□□□ -0.8
ARHGEF3-208ENST00000477440 TMEM258P61165 79 aa9.96□□□□□ -0.82
ARHGEF3-208ENST00000477440 SPINT4Q6UDR6 99 aa9.96□□□□□ -0.82
ARHGEF3-208ENST00000477440 SPRR2EP22531 72 aa9.93□□□□□ -0.82
ARHGEF3-208ENST00000477440 SPRR2BP35325 72 aa9.93□□□□□ -0.82
ARHGEF3-208ENST00000477440 SPRR2AP35326 72 aa9.93□□□□□ -0.82
ARHGEF3-208ENST00000477440 KRTAP12-1P59990 96 aa9.93□□□□□ -0.82
ARHGEF3-208ENST00000477440 SMIM26A0A096LP01 95 aa9.85□□□□□ -0.83
ARHGEF3-208ENST00000477440 KRTAP20-1Q3LI63 56 aa9.85□□□□□ -0.83
ARHGEF3-208ENST00000477440 A8MU10 97 aa9.84□□□□□ -0.83
ARHGEF3-208ENST00000477440 LCE1AQ5T7P2 110 aa9.84□□□□□ -0.83
ARHGEF3-208ENST00000477440 PRR15LQ9BU68 103 aa9.82□□□□□ -0.84
ARHGEF3-208ENST00000477440 LINC01558Q9Y6Z2 57 aa9.82□□□□□ -0.84
ARHGEF3-208ENST00000477440 KRTAP2-3P0C7H8 128 aa9.64□□□□□ -0.87
ARHGEF3-208ENST00000477440 KRTAP2-4Q9BYR9 128 aa9.64□□□□□ -0.87
ARHGEF3-208ENST00000477440 SPRR2DP22532 72 aa9.59□□□□□ -0.87
ARHGEF3-208ENST00000477440 KRTAP19-7Q3SYF9 63 aa9.54□□□□□ -0.88
ARHGEF3-208ENST00000477440 UQCR11O14957 56 aa9.52□□□□□ -0.89
ARHGEF3-208ENST00000477440 C10orf95Q9H7T3 257 aa9.48□□□□□ -0.89
ARHGEF3-208ENST00000477440 MT1EP04732 61 aa9.44□□□□□ -0.9
ARHGEF3-208ENST00000477440 TNP1P09430 55 aa9.36□□□□□ -0.91
ARHGEF3-208ENST00000477440 KRTAP19-5Q3LI72 72 aa9.36□□□□□ -0.91
ARHGEF3-208ENST00000477440 KRTAP2-2Q9BYT5 123 aa9.35□□□□□ -0.91
ARHGEF3-208ENST00000477440 KRTAP2-1Q9BYU5 128 aa9.35□□□□□ -0.91
ARHGEF3-208ENST00000477440 MIR22HGQ0VDD5 57 aa9.34□□□□□ -0.91
ARHGEF3-208ENST00000477440 V9GYY9 64 aa9.34□□□□□ -0.91
ARHGEF3-208ENST00000477440 PSPHP1O15172 72 aa9.32□□□□□ -0.92
ARHGEF3-208ENST00000477440 Q1T7F1 81 aa9.32□□□□□ -0.92
ARHGEF3-208ENST00000477440 LCE3BQ5TA77 95 aa9.31□□□□□ -0.92
ARHGEF3-208ENST00000477440 KRTAP19-3Q7Z4W3 81 aa9.3□□□□□ -0.92
ARHGEF3-208ENST00000477440 LCE5AQ5TCM9 118 aa9.29□□□□□ -0.92
ARHGEF3-208ENST00000477440 LCE3AQ5TA76 89 aa9.28□□□□□ -0.92
ARHGEF3-208ENST00000477440 PCP4P48539 62 aa9.16□□□□□ -0.94
ARHGEF3-208ENST00000477440 MT1GP13640 62 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms