RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 PKD1P98161 4303 aa6.91□□□□□ -1.3
TPRN-203ENST00000477345 RPL37P61927 97 aaKnown RBP6.91□□□□□ -1.3
TPRN-203ENST00000477345 DYNC1H1Q14204 4646 aaKnown RBP6.9□□□□□ -1.31
TPRN-203ENST00000477345 KRTAP3-1Q9BYR8 98 aa6.88□□□□□ -1.31
TPRN-203ENST00000477345 MYCBP2O75592 4640 aa6.85□□□□□ -1.31
TPRN-203ENST00000477345 LRP1Q07954 4544 aaKnown RBP6.79□□□□□ -1.32
TPRN-203ENST00000477345 APOBP04114 4563 aaKnown RBP6.76□□□□□ -1.33
TPRN-203ENST00000477345 SEC61BP60468 96 aaKnown RBP6.76□□□□□ -1.33
TPRN-203ENST00000477345 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
TPRN-203ENST00000477345 KRTAP21-3Q3LHN1 58 aa6.72□□□□□ -1.33
TPRN-203ENST00000477345 A0A1B0GVY2 172 aa6.71□□□□□ -1.33
TPRN-203ENST00000477345 RYR2Q92736 4967 aa6.7□□□□□ -1.34
TPRN-203ENST00000477345 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
TPRN-203ENST00000477345 Q5VSD8 79 aa6.68□□□□□ -1.34
TPRN-203ENST00000477345 RYR3Q15413 4870 aa6.66□□□□□ -1.34
TPRN-203ENST00000477345 S4R3F8 94 aa6.64□□□□□ -1.35
TPRN-203ENST00000477345 FAT3Q8TDW7 4589 aa6.63□□□□□ -1.35
TPRN-203ENST00000477345 KRTAP10-4P60372 401 aaPredicted RBP6.6□□□□□ -1.35
TPRN-203ENST00000477345 KRTAP10-8P60410 259 aa6.59□□□□□ -1.35
TPRN-203ENST00000477345 KRTAP17-1Q9BYP8 105 aa6.59□□□□□ -1.35
TPRN-203ENST00000477345 KRTAP12-2P59991 146 aa6.57□□□□□ -1.36
TPRN-203ENST00000477345 KRTAP10-6P60371 365 aaPredicted RBP6.57□□□□□ -1.36
TPRN-203ENST00000477345 RYR1P21817 5038 aa6.53□□□□□ -1.36
TPRN-203ENST00000477345 PLAC4Q8WY50 150 aa6.52□□□□□ -1.37
TPRN-203ENST00000477345 XP32Q5T750 250 aa6.51□□□□□ -1.37
TPRN-203ENST00000477345 EPPK1P58107 5090 aaKnown RBP6.49□□□□□ -1.37
TPRN-203ENST00000477345 KRTAP3-3Q9BYR6 98 aa6.48□□□□□ -1.37
TPRN-203ENST00000477345 HSPG2P98160 4391 aa6.48□□□□□ -1.37
TPRN-203ENST00000477345 PKHD1L1Q86WI1 4243 aa6.48□□□□□ -1.37
TPRN-203ENST00000477345 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.37
TPRN-203ENST00000477345 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
TPRN-203ENST00000477345 M0QZ58 72 aa6.44□□□□□ -1.38
TPRN-203ENST00000477345 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
TPRN-203ENST00000477345 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
TPRN-203ENST00000477345 R4GN34 69 aa6.38□□□□□ -1.39
TPRN-203ENST00000477345 LRP2P98164 4655 aa6.36□□□□□ -1.39
TPRN-203ENST00000477345 LPAP08519 4548 aa6.35□□□□□ -1.39
TPRN-203ENST00000477345 J3QL48 77 aa6.33□□□□□ -1.4
TPRN-203ENST00000477345 ABCA13Q86UQ4 5058 aa6.32□□□□□ -1.4
TPRN-203ENST00000477345 CAMK2N1Q7Z7J9 78 aa6.32□□□□□ -1.4
TPRN-203ENST00000477345 TNXBP22105 4242 aa6.31□□□□□ -1.4
TPRN-203ENST00000477345 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
TPRN-203ENST00000477345 MUC2Q02817 5179 aa6.17□□□□□ -1.42
TPRN-203ENST00000477345 HERC2O95714 4834 aa6.14□□□□□ -1.43
TPRN-203ENST00000477345 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
TPRN-203ENST00000477345 PRO2289Q9P1D8 64 aa6.09□□□□□ -1.43
TPRN-203ENST00000477345 HERC1Q15751 4861 aa6.01□□□□□ -1.45
TPRN-203ENST00000477345 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
TPRN-203ENST00000477345 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
TPRN-203ENST00000477345 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
TPRN-203ENST00000477345 PCLOQ9Y6V0 5065 aa5.89□□□□□ -1.47
TPRN-203ENST00000477345 FAT4Q6V0I7 4981 aa5.85□□□□□ -1.47
TPRN-203ENST00000477345 INE1O15225 51 aa5.81□□□□□ -1.48
TPRN-203ENST00000477345 BIRC6Q9NR09 4857 aa5.8□□□□□ -1.48
TPRN-203ENST00000477345 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
TPRN-203ENST00000477345 M0R2T5 61 aa5.78□□□□□ -1.48
TPRN-203ENST00000477345 TNP1P09430 55 aa5.76□□□□□ -1.49
TPRN-203ENST00000477345 UBR4Q5T4S7 5183 aa5.74□□□□□ -1.49
TPRN-203ENST00000477345 MUC17Q685J3 4493 aa5.69□□□□□ -1.5
TPRN-203ENST00000477345 HMCN2Q8NDA2 5059 aa5.6□□□□□ -1.51
TPRN-203ENST00000477345 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
TPRN-203ENST00000477345 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
TPRN-203ENST00000477345 FLGP20930 4061 aaPredicted RBP5.45□□□□□ -1.54
TPRN-203ENST00000477345 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
TPRN-203ENST00000477345 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
TPRN-203ENST00000477345 LCE2CQ5TA81 110 aa5.36□□□□□ -1.55
TPRN-203ENST00000477345 MT1HP80294 61 aa5.3□□□□□ -1.56
TPRN-203ENST00000477345 MT1FP04733 61 aa5.24□□□□□ -1.57
TPRN-203ENST00000477345 USH2AO75445 5202 aa5.23□□□□□ -1.57
TPRN-203ENST00000477345 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
TPRN-203ENST00000477345 MT2AP02795 61 aa5.19□□□□□ -1.58
TPRN-203ENST00000477345 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
TPRN-203ENST00000477345 KMT2DO14686 5537 aa5.14□□□□□ -1.59
TPRN-203ENST00000477345 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
TPRN-203ENST00000477345 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
TPRN-203ENST00000477345 SPRR2GQ9BYE4 73 aa5.06□□□□□ -1.6
TPRN-203ENST00000477345 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
TPRN-203ENST00000477345 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
TPRN-203ENST00000477345 KRTAP8-1Q8IUC2 63 aa4.95□□□□□ -1.62
TPRN-203ENST00000477345 MT1BP07438 61 aa4.93□□□□□ -1.62
TPRN-203ENST00000477345 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
TPRN-203ENST00000477345 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
TPRN-203ENST00000477345 MT1XP80297 61 aa4.87□□□□□ -1.63
TPRN-203ENST00000477345 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
TPRN-203ENST00000477345 LCE2BO14633 110 aa4.83□□□□□ -1.64
TPRN-203ENST00000477345 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
TPRN-203ENST00000477345 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
TPRN-203ENST00000477345 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
TPRN-203ENST00000477345 KRTAP4-8A0A0G2JLE6 195 aa4.77□□□□□ -1.65
TPRN-203ENST00000477345 KRTAP4-8Q9BYQ9 185 aa4.77□□□□□ -1.65
TPRN-203ENST00000477345 KRTAP4-7Q9BYR0 210 aa4.76□□□□□ -1.65
TPRN-203ENST00000477345 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
TPRN-203ENST00000477345 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.65
TPRN-203ENST00000477345 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
TPRN-203ENST00000477345 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
TPRN-203ENST00000477345 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
TPRN-203ENST00000477345 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
TPRN-203ENST00000477345 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
TPRN-203ENST00000477345 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
TPRN-203ENST00000477345 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms