RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 DMAC1Q96GE9 116 aa7.29□□□□□ -1.24
HDAC7-221ENST00000477203 RPS29P62273 56 aaKnown RBP7.27□□□□□ -1.25
HDAC7-221ENST00000477203 ROMO1P60602 79 aa7.26□□□□□ -1.25
HDAC7-221ENST00000477203 KRTAP10-8P60410 259 aa7.24□□□□□ -1.25
HDAC7-221ENST00000477203 KRTAP4-5Q9BYR2 181 aa7.23□□□□□ -1.25
HDAC7-221ENST00000477203 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
HDAC7-221ENST00000477203 A8MUU9 505 aa7.17□□□□□ -1.26
HDAC7-221ENST00000477203 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
HDAC7-221ENST00000477203 ABCA13Q86UQ4 5058 aa7.15□□□□□ -1.26
HDAC7-221ENST00000477203 MT1HL1P0DM35 61 aa7.14□□□□□ -1.27
HDAC7-221ENST00000477203 LPAP08519 4548 aa7.13□□□□□ -1.27
HDAC7-221ENST00000477203 LRP2P98164 4655 aa7.12□□□□□ -1.27
HDAC7-221ENST00000477203 P0C880 135 aa7.12□□□□□ -1.27
HDAC7-221ENST00000477203 H0YAA0 97 aa7.08□□□□□ -1.28
HDAC7-221ENST00000477203 XP32Q5T750 250 aa7.07□□□□□ -1.28
HDAC7-221ENST00000477203 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
HDAC7-221ENST00000477203 SPINT4Q6UDR6 99 aa7.03□□□□□ -1.28
HDAC7-221ENST00000477203 HERC2O95714 4834 aa7□□□□□ -1.29
HDAC7-221ENST00000477203 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
HDAC7-221ENST00000477203 A0A1B0GU33 70 aa6.97□□□□□ -1.29
HDAC7-221ENST00000477203 NDUFAF8A1L188 74 aa6.96□□□□□ -1.29
HDAC7-221ENST00000477203 J3QL48 77 aa6.95□□□□□ -1.3
HDAC7-221ENST00000477203 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
HDAC7-221ENST00000477203 K7ERS5 55 aa6.9□□□□□ -1.31
HDAC7-221ENST00000477203 H1FX-AS1Q4G0G2 97 aa6.86□□□□□ -1.31
HDAC7-221ENST00000477203 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
HDAC7-221ENST00000477203 A0A0D9SG42 100 aa6.83□□□□□ -1.32
HDAC7-221ENST00000477203 MUC2Q02817 5179 aa6.81□□□□□ -1.32
HDAC7-221ENST00000477203 HERC1Q15751 4861 aa6.8□□□□□ -1.32
HDAC7-221ENST00000477203 A0A0A0MQY5 61 aa6.8□□□□□ -1.32
HDAC7-221ENST00000477203 TPRXLQ17RH7 258 aa6.8□□□□□ -1.32
HDAC7-221ENST00000477203 BIRC6Q9NR09 4857 aa6.79□□□□□ -1.32
HDAC7-221ENST00000477203 PCLOQ9Y6V0 5065 aa6.77□□□□□ -1.33
HDAC7-221ENST00000477203 S4R3F8 94 aa6.75□□□□□ -1.33
HDAC7-221ENST00000477203 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
HDAC7-221ENST00000477203 KRTAP4-1Q9BYQ7 146 aa6.66□□□□□ -1.34
HDAC7-221ENST00000477203 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
HDAC7-221ENST00000477203 SEC61BP60468 96 aaKnown RBP6.62□□□□□ -1.35
HDAC7-221ENST00000477203 KRTAP13-4Q3LI77 160 aa6.59□□□□□ -1.36
HDAC7-221ENST00000477203 MUC17Q685J3 4493 aa6.58□□□□□ -1.36
HDAC7-221ENST00000477203 KRTAP10-6P60371 365 aaPredicted RBP6.58□□□□□ -1.36
HDAC7-221ENST00000477203 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
HDAC7-221ENST00000477203 RNF213Q63HN8 5207 aa6.52□□□□□ -1.37
HDAC7-221ENST00000477203 FAT4Q6V0I7 4981 aa6.48□□□□□ -1.37
HDAC7-221ENST00000477203 LUZP6Q538Z0 58 aa6.48□□□□□ -1.37
HDAC7-221ENST00000477203 HMCN2Q8NDA2 5059 aa6.47□□□□□ -1.37
HDAC7-221ENST00000477203 UBR4Q5T4S7 5183 aa6.44□□□□□ -1.38
HDAC7-221ENST00000477203 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
HDAC7-221ENST00000477203 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
HDAC7-221ENST00000477203 M0QZ58 72 aa6.35□□□□□ -1.39
HDAC7-221ENST00000477203 KRTAP19-2Q3LHN2 52 aa6.31□□□□□ -1.4
HDAC7-221ENST00000477203 R4GN34 69 aa6.31□□□□□ -1.4
HDAC7-221ENST00000477203 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
HDAC7-221ENST00000477203 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
HDAC7-221ENST00000477203 M0R2T5 61 aa6.21□□□□□ -1.41
HDAC7-221ENST00000477203 PLAC4Q8WY50 150 aa6.19□□□□□ -1.42
HDAC7-221ENST00000477203 LCE2CQ5TA81 110 aa6.12□□□□□ -1.43
HDAC7-221ENST00000477203 MT1HP80294 61 aa6.01□□□□□ -1.45
HDAC7-221ENST00000477203 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
HDAC7-221ENST00000477203 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
HDAC7-221ENST00000477203 MT1FP04733 61 aa5.88□□□□□ -1.47
HDAC7-221ENST00000477203 MT2AP02795 61 aa5.85□□□□□ -1.47
HDAC7-221ENST00000477203 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
HDAC7-221ENST00000477203 KRTAP9-8Q9BYQ0 159 aa5.8□□□□□ -1.48
HDAC7-221ENST00000477203 SPRR2GQ9BYE4 73 aa5.72□□□□□ -1.49
HDAC7-221ENST00000477203 USH2AO75445 5202 aa5.72□□□□□ -1.49
HDAC7-221ENST00000477203 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
HDAC7-221ENST00000477203 TNP1P09430 55 aa5.61□□□□□ -1.51
HDAC7-221ENST00000477203 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
HDAC7-221ENST00000477203 MT1BP07438 61 aa5.55□□□□□ -1.52
HDAC7-221ENST00000477203 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
HDAC7-221ENST00000477203 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
HDAC7-221ENST00000477203 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
HDAC7-221ENST00000477203 LCE2BO14633 110 aa5.47□□□□□ -1.53
HDAC7-221ENST00000477203 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
HDAC7-221ENST00000477203 KMT2DO14686 5537 aa5.45□□□□□ -1.54
HDAC7-221ENST00000477203 MT1XP80297 61 aa5.45□□□□□ -1.54
HDAC7-221ENST00000477203 KRTAP10-5P60370 271 aa5.44□□□□□ -1.54
HDAC7-221ENST00000477203 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
HDAC7-221ENST00000477203 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
HDAC7-221ENST00000477203 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
HDAC7-221ENST00000477203 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
HDAC7-221ENST00000477203 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
HDAC7-221ENST00000477203 INE1O15225 51 aa5.22□□□□□ -1.57
HDAC7-221ENST00000477203 SSPOA2VEC9 5147 aa5.21□□□□□ -1.58
HDAC7-221ENST00000477203 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
HDAC7-221ENST00000477203 KRTAP4-8Q9BYQ9 185 aa5.19□□□□□ -1.58
HDAC7-221ENST00000477203 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
HDAC7-221ENST00000477203 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
HDAC7-221ENST00000477203 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
HDAC7-221ENST00000477203 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
HDAC7-221ENST00000477203 MUC12Q9UKN1 5478 aa4.9□□□□□ -1.62
HDAC7-221ENST00000477203 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
HDAC7-221ENST00000477203 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
HDAC7-221ENST00000477203 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
HDAC7-221ENST00000477203 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
HDAC7-221ENST00000477203 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
HDAC7-221ENST00000477203 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
HDAC7-221ENST00000477203 KRTAP9-2Q9BYQ4 174 aa4.76□□□□□ -1.65
HDAC7-221ENST00000477203 LCE2DQ5TA82 110 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms