RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 A0A087WVE0 104 aa5.02□□□□□ -1.61
PTPRN-213ENST00000476930 LCE3BQ5TA77 95 aa5.02□□□□□ -1.61
PTPRN-213ENST00000476930 SPRR2GQ9BYE4 73 aa5.01□□□□□ -1.61
PTPRN-213ENST00000476930 TRAV22A0A0B4J277 110 aa5□□□□□ -1.61
PTPRN-213ENST00000476930 ACYP1P07311 99 aa5□□□□□ -1.61
PTPRN-213ENST00000476930 LOC101927531A0A1B0GV80 90 aa4.99□□□□□ -1.61
PTPRN-213ENST00000476930 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
PTPRN-213ENST00000476930 HIST1H4AP62805 103 aaKnown RBP4.98□□□□□ -1.61
PTPRN-213ENST00000476930 KLKP1Q107X0 134 aa4.98□□□□□ -1.61
PTPRN-213ENST00000476930 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
PTPRN-213ENST00000476930 Q5VV11 94 aa4.98□□□□□ -1.61
PTPRN-213ENST00000476930 FAM240AA0A1B0GVK7 77 aa4.97□□□□□ -1.61
PTPRN-213ENST00000476930 A6NN06 94 aa4.96□□□□□ -1.62
PTPRN-213ENST00000476930 MUC12Q9UKN1 5478 aa4.95□□□□□ -1.62
PTPRN-213ENST00000476930 ATP5EP2Q5VTU8 51 aa4.95□□□□□ -1.62
PTPRN-213ENST00000476930 H0Y9P7 68 aa4.94□□□□□ -1.62
PTPRN-213ENST00000476930 UQCRQO14949 82 aa4.94□□□□□ -1.62
PTPRN-213ENST00000476930 NEBP20929 6669 aa4.94□□□□□ -1.62
PTPRN-213ENST00000476930 ATOX1O00244 68 aa4.9□□□□□ -1.63
PTPRN-213ENST00000476930 KRTAP10-5P60370 271 aa4.9□□□□□ -1.63
PTPRN-213ENST00000476930 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
PTPRN-213ENST00000476930 LINC00643Q86TS7 51 aa4.89□□□□□ -1.63
PTPRN-213ENST00000476930 IMUPQ9GZP8 106 aa4.88□□□□□ -1.63
PTPRN-213ENST00000476930 CRIPTQ9P021 101 aa4.88□□□□□ -1.63
PTPRN-213ENST00000476930 NDUFC1O43677 76 aa4.87□□□□□ -1.63
PTPRN-213ENST00000476930 LINC00208Q96KT6 92 aa4.86□□□□□ -1.63
PTPRN-213ENST00000476930 A0A1B0GV90 55 aa4.84□□□□□ -1.63
PTPRN-213ENST00000476930 OCR1Q9BZK8 76 aa4.84□□□□□ -1.63
PTPRN-213ENST00000476930 A8MUN3 132 aa4.83□□□□□ -1.64
PTPRN-213ENST00000476930 H0YAA0 97 aa4.83□□□□□ -1.64
PTPRN-213ENST00000476930 ADM2Q7Z4H4 148 aa4.82□□□□□ -1.64
PTPRN-213ENST00000476930 KMT2DO14686 5537 aa4.82□□□□□ -1.64
PTPRN-213ENST00000476930 MP68P56378 58 aa4.8□□□□□ -1.64
PTPRN-213ENST00000476930 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
PTPRN-213ENST00000476930 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
PTPRN-213ENST00000476930 SEC61GP60059 68 aa4.77□□□□□ -1.65
PTPRN-213ENST00000476930 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
PTPRN-213ENST00000476930 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
PTPRN-213ENST00000476930 P0C880 135 aa4.72□□□□□ -1.65
PTPRN-213ENST00000476930 H3BPC8 53 aa4.71□□□□□ -1.66
PTPRN-213ENST00000476930 J3QR89 54 aa4.7□□□□□ -1.66
PTPRN-213ENST00000476930 SCGB1A1P11684 91 aa4.7□□□□□ -1.66
PTPRN-213ENST00000476930 MT1XP80297 61 aa4.7□□□□□ -1.66
PTPRN-213ENST00000476930 DMAC1Q96GE9 116 aa4.7□□□□□ -1.66
PTPRN-213ENST00000476930 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
PTPRN-213ENST00000476930 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
PTPRN-213ENST00000476930 R4GN34 69 aa4.68□□□□□ -1.66
PTPRN-213ENST00000476930 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
PTPRN-213ENST00000476930 PLAC4Q8WY50 150 aa4.67□□□□□ -1.66
PTPRN-213ENST00000476930 PRO2289Q9P1D8 64 aa4.66□□□□□ -1.66
PTPRN-213ENST00000476930 M0QZ58 72 aa4.65□□□□□ -1.67
PTPRN-213ENST00000476930 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
PTPRN-213ENST00000476930 C20orf197Q8N268 126 aa4.64□□□□□ -1.67
PTPRN-213ENST00000476930 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
PTPRN-213ENST00000476930 MT-ATP8P03928 68 aa4.6□□□□□ -1.67
PTPRN-213ENST00000476930 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
PTPRN-213ENST00000476930 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
PTPRN-213ENST00000476930 TRAV7A0A075B6U4 112 aa4.59□□□□□ -1.67
PTPRN-213ENST00000476930 ACYP2P14621 99 aa4.57□□□□□ -1.68
PTPRN-213ENST00000476930 KRTAP12-2P59991 146 aa4.56□□□□□ -1.68
PTPRN-213ENST00000476930 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
PTPRN-213ENST00000476930 SPRR2EP22531 72 aa4.54□□□□□ -1.68
PTPRN-213ENST00000476930 SPRR2BP35325 72 aa4.54□□□□□ -1.68
PTPRN-213ENST00000476930 SPRR2AP35326 72 aa4.54□□□□□ -1.68
PTPRN-213ENST00000476930 SMIM20Q8N5G0 67 aa4.53□□□□□ -1.68
PTPRN-213ENST00000476930 K7ERU9 68 aa4.5□□□□□ -1.69
PTPRN-213ENST00000476930 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
PTPRN-213ENST00000476930 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
PTPRN-213ENST00000476930 SPTSSBQ8NFR3 76 aa4.5□□□□□ -1.69
PTPRN-213ENST00000476930 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
PTPRN-213ENST00000476930 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
PTPRN-213ENST00000476930 SNURFQ9Y675 71 aa4.5□□□□□ -1.69
PTPRN-213ENST00000476930 CHKB-CPT1BH3BT56 60 aa4.48□□□□□ -1.69
PTPRN-213ENST00000476930 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
PTPRN-213ENST00000476930 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
PTPRN-213ENST00000476930 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
PTPRN-213ENST00000476930 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
PTPRN-213ENST00000476930 SPANXA2-OT1Q8N9U9 137 aa4.41□□□□□ -1.7
PTPRN-213ENST00000476930 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
PTPRN-213ENST00000476930 SPRR2DP22532 72 aa4.39□□□□□ -1.71
PTPRN-213ENST00000476930 SERP2Q8N6R1 65 aa4.38□□□□□ -1.71
PTPRN-213ENST00000476930 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
PTPRN-213ENST00000476930 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
PTPRN-213ENST00000476930 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
PTPRN-213ENST00000476930 COA5Q86WW8 74 aa4.31□□□□□ -1.72
PTPRN-213ENST00000476930 CAMK2N1Q7Z7J9 78 aa4.29□□□□□ -1.72
PTPRN-213ENST00000476930 V9GYY9 64 aa4.26□□□□□ -1.73
PTPRN-213ENST00000476930 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
PTPRN-213ENST00000476930 A0A0D9SG42 100 aa4.24□□□□□ -1.73
PTPRN-213ENST00000476930 COX7CP15954 63 aa4.23□□□□□ -1.73
PTPRN-213ENST00000476930 SPATA8Q6RVD6 105 aa4.23□□□□□ -1.73
PTPRN-213ENST00000476930 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
PTPRN-213ENST00000476930 SERP1Q9Y6X1 66 aa4.23□□□□□ -1.73
PTPRN-213ENST00000476930 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
PTPRN-213ENST00000476930 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
PTPRN-213ENST00000476930 H7BZZ5 65 aa4.19□□□□□ -1.74
PTPRN-213ENST00000476930 A0A1B0GU33 70 aa4.18□□□□□ -1.74
PTPRN-213ENST00000476930 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
PTPRN-213ENST00000476930 MT1EP04732 61 aa4.16□□□□□ -1.74
PTPRN-213ENST00000476930 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms