RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
MACF1-216ENST00000476350 HYDINQ4G0P3 5121 aa4.53□□□□□ -1.68
MACF1-216ENST00000476350 XP32Q5T750 250 aa4.52□□□□□ -1.69
MACF1-216ENST00000476350 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
MACF1-216ENST00000476350 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
MACF1-216ENST00000476350 LUZP6Q538Z0 58 aa4.51□□□□□ -1.69
MACF1-216ENST00000476350 KRTAP3-1Q9BYR8 98 aa4.5□□□□□ -1.69
MACF1-216ENST00000476350 H3BS24 57 aa4.49□□□□□ -1.69
MACF1-216ENST00000476350 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
MACF1-216ENST00000476350 PKHD1P08F94 4074 aa4.48□□□□□ -1.69
MACF1-216ENST00000476350 MEGF8Q7Z7M0 2845 aa4.47□□□□□ -1.69
MACF1-216ENST00000476350 TGP01266 2768 aa4.46□□□□□ -1.69
MACF1-216ENST00000476350 ROMO1P60602 79 aa4.39□□□□□ -1.71
MACF1-216ENST00000476350 TNP1P09430 55 aa4.37□□□□□ -1.71
MACF1-216ENST00000476350 HSPG2P98160 4391 aa4.36□□□□□ -1.71
MACF1-216ENST00000476350 DYNC1H1Q14204 4646 aaKnown RBP4.36□□□□□ -1.71
MACF1-216ENST00000476350 TNXBP22105 4242 aa4.34□□□□□ -1.71
MACF1-216ENST00000476350 DNHD1Q96M86 4753 aa4.33□□□□□ -1.72
MACF1-216ENST00000476350 KRTAP10-4P60372 401 aaPredicted RBP4.32□□□□□ -1.72
MACF1-216ENST00000476350 FAT3Q8TDW7 4589 aa4.31□□□□□ -1.72
MACF1-216ENST00000476350 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
MACF1-216ENST00000476350 FAT1Q14517 4588 aa4.3□□□□□ -1.72
MACF1-216ENST00000476350 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
MACF1-216ENST00000476350 KRTAP3-3Q9BYR6 98 aa4.29□□□□□ -1.72
MACF1-216ENST00000476350 KRTAP3-2Q9BYR7 98 aa4.25□□□□□ -1.73
MACF1-216ENST00000476350 P0C880 135 aa4.25□□□□□ -1.73
MACF1-216ENST00000476350 LRP1Q07954 4544 aaKnown RBP4.24□□□□□ -1.73
MACF1-216ENST00000476350 C10orf95Q9H7T3 257 aa4.22□□□□□ -1.73
MACF1-216ENST00000476350 KRTAP12-2P59991 146 aa4.21□□□□□ -1.74
MACF1-216ENST00000476350 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
MACF1-216ENST00000476350 RYR2Q92736 4967 aa4.14□□□□□ -1.75
MACF1-216ENST00000476350 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
MACF1-216ENST00000476350 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
MACF1-216ENST00000476350 MYCBP2O75592 4640 aa4.13□□□□□ -1.75
MACF1-216ENST00000476350 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
MACF1-216ENST00000476350 MT1HL1P0DM35 61 aa4.11□□□□□ -1.75
MACF1-216ENST00000476350 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
MACF1-216ENST00000476350 LPAP08519 4548 aa4.07□□□□□ -1.76
MACF1-216ENST00000476350 KRTAP4-5Q9BYR2 181 aa4.03□□□□□ -1.76
MACF1-216ENST00000476350 KMT2CQ8NEZ4 4911 aaKnown RBP3.99□□□□□ -1.77
MACF1-216ENST00000476350 KRTAP17-1Q9BYP8 105 aa3.97□□□□□ -1.77
MACF1-216ENST00000476350 RYR1P21817 5038 aa3.95□□□□□ -1.78
MACF1-216ENST00000476350 MUC17Q685J3 4493 aa3.89□□□□□ -1.79
MACF1-216ENST00000476350 LORP23490 312 aaPredicted RBP3.88□□□□□ -1.79
MACF1-216ENST00000476350 RYR3Q15413 4870 aa3.86□□□□□ -1.79
MACF1-216ENST00000476350 LRP2P98164 4655 aa3.84□□□□□ -1.79
MACF1-216ENST00000476350 KRTAP4-1Q9BYQ7 146 aa3.78□□□□□ -1.8
MACF1-216ENST00000476350 ABCA13Q86UQ4 5058 aa3.76□□□□□ -1.81
MACF1-216ENST00000476350 KRTAP8-1Q8IUC2 63 aa3.74□□□□□ -1.81
MACF1-216ENST00000476350 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
MACF1-216ENST00000476350 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
MACF1-216ENST00000476350 KIAA1109Q2LD37 5005 aa3.69□□□□□ -1.82
MACF1-216ENST00000476350 KRTAP19-2Q3LHN2 52 aa3.68□□□□□ -1.82
MACF1-216ENST00000476350 HERC1Q15751 4861 aa3.67□□□□□ -1.82
MACF1-216ENST00000476350 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
MACF1-216ENST00000476350 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
MACF1-216ENST00000476350 MT1HP80294 61 aa3.61□□□□□ -1.83
MACF1-216ENST00000476350 BIRC6Q9NR09 4857 aa3.55□□□□□ -1.84
MACF1-216ENST00000476350 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
MACF1-216ENST00000476350 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
MACF1-216ENST00000476350 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
MACF1-216ENST00000476350 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
MACF1-216ENST00000476350 PCLOQ9Y6V0 5065 aa3.48□□□□□ -1.85
MACF1-216ENST00000476350 MT2AP02795 61 aa3.48□□□□□ -1.85
MACF1-216ENST00000476350 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
MACF1-216ENST00000476350 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
MACF1-216ENST00000476350 KRTAP9-6A0A140TA67 174 aa3.46□□□□□ -1.85
MACF1-216ENST00000476350 KRTAP19-4Q3LI73 84 aa3.44□□□□□ -1.86
MACF1-216ENST00000476350 SPRR2EP22531 72 aa3.43□□□□□ -1.86
MACF1-216ENST00000476350 SPRR2BP35325 72 aa3.43□□□□□ -1.86
MACF1-216ENST00000476350 SPRR2AP35326 72 aa3.43□□□□□ -1.86
MACF1-216ENST00000476350 HERC2O95714 4834 aa3.43□□□□□ -1.86
MACF1-216ENST00000476350 MUC2Q02817 5179 aa3.43□□□□□ -1.86
MACF1-216ENST00000476350 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
MACF1-216ENST00000476350 LCE2CQ5TA81 110 aa3.41□□□□□ -1.86
MACF1-216ENST00000476350 KRTAP9-2Q9BYQ4 174 aa3.41□□□□□ -1.86
MACF1-216ENST00000476350 KRTAP19-1Q8IUB9 90 aa3.41□□□□□ -1.86
MACF1-216ENST00000476350 SPRR2DP22532 72 aa3.37□□□□□ -1.87
MACF1-216ENST00000476350 MT1FP04733 61 aa3.34□□□□□ -1.87
MACF1-216ENST00000476350 LCE2DQ5TA82 110 aaPredicted RBP3.34□□□□□ -1.88
MACF1-216ENST00000476350 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.88
MACF1-216ENST00000476350 LCE2BO14633 110 aa3.29□□□□□ -1.88
MACF1-216ENST00000476350 INE1O15225 51 aa3.29□□□□□ -1.88
MACF1-216ENST00000476350 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
MACF1-216ENST00000476350 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.89
MACF1-216ENST00000476350 MT1XP80297 61 aa3.27□□□□□ -1.89
MACF1-216ENST00000476350 KRTAP9-8Q9BYQ0 159 aa3.27□□□□□ -1.89
MACF1-216ENST00000476350 UBR4Q5T4S7 5183 aa3.27□□□□□ -1.89
MACF1-216ENST00000476350 MT1BP07438 61 aa3.24□□□□□ -1.89
MACF1-216ENST00000476350 FAT4Q6V0I7 4981 aa3.24□□□□□ -1.89
MACF1-216ENST00000476350 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
MACF1-216ENST00000476350 RNF213Q63HN8 5207 aa3.19□□□□□ -1.9
MACF1-216ENST00000476350 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
MACF1-216ENST00000476350 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
MACF1-216ENST00000476350 KRTAP9-3Q9BYQ3 159 aa3.13□□□□□ -1.91
MACF1-216ENST00000476350 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
MACF1-216ENST00000476350 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
MACF1-216ENST00000476350 MT1GP13640 62 aa3.08□□□□□ -1.92
MACF1-216ENST00000476350 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
MACF1-216ENST00000476350 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms