RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 LINC00472Q9H8W2 130 aa3.96□□□□□ -1.78
LSAMP-204ENST00000475403 A0A087WSZ3 146 aa3.95□□□□□ -1.78
LSAMP-204ENST00000475403 FAM168BA1KXE4 195 aa3.95□□□□□ -1.78
LSAMP-204ENST00000475403 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
LSAMP-204ENST00000475403 HRES1P13985 223 aa3.95□□□□□ -1.78
LSAMP-204ENST00000475403 SPRR1BP22528 89 aa3.95□□□□□ -1.78
LSAMP-204ENST00000475403 SPATA8Q6RVD6 105 aa3.95□□□□□ -1.78
LSAMP-204ENST00000475403 KRTAP11-1Q8IUC1 163 aa3.94□□□□□ -1.78
LSAMP-204ENST00000475403 ZNF861PO60384 105 aa3.93□□□□□ -1.78
LSAMP-204ENST00000475403 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
LSAMP-204ENST00000475403 LINC00304Q8N9R0 145 aa3.92□□□□□ -1.78
LSAMP-204ENST00000475403 DEFB116Q30KQ4 102 aa3.91□□□□□ -1.78
LSAMP-204ENST00000475403 SEC61BP60468 96 aaKnown RBP3.9□□□□□ -1.79
LSAMP-204ENST00000475403 ACYP2P14621 99 aa3.89□□□□□ -1.79
LSAMP-204ENST00000475403 PCOTHQ58A44 107 aa3.88□□□□□ -1.79
LSAMP-204ENST00000475403 UQCR11O14957 56 aa3.87□□□□□ -1.79
LSAMP-204ENST00000475403 C8orf17Q9NRJ1 99 aa3.87□□□□□ -1.79
LSAMP-204ENST00000475403 ANAPC11Q9NYG5 84 aa3.87□□□□□ -1.79
LSAMP-204ENST00000475403 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
LSAMP-204ENST00000475403 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
LSAMP-204ENST00000475403 DMAC1Q96GE9 116 aa3.86□□□□□ -1.79
LSAMP-204ENST00000475403 A0A1B0GU69 56 aa3.85□□□□□ -1.79
LSAMP-204ENST00000475403 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
LSAMP-204ENST00000475403 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
LSAMP-204ENST00000475403 MRPL34Q9BQ48 92 aaKnown RBP3.85□□□□□ -1.79
LSAMP-204ENST00000475403 KRTAP4-1Q9BYQ7 146 aa3.85□□□□□ -1.79
LSAMP-204ENST00000475403 M0R2T5 61 aa3.84□□□□□ -1.79
LSAMP-204ENST00000475403 Q96NJ1 140 aa3.84□□□□□ -1.79
LSAMP-204ENST00000475403 A0A1B0GVX0 72 aa3.83□□□□□ -1.8
LSAMP-204ENST00000475403 MT1HP80294 61 aa3.83□□□□□ -1.8
LSAMP-204ENST00000475403 KRTAP13-3Q3SY46 172 aa3.83□□□□□ -1.8
LSAMP-204ENST00000475403 NOTCH2NLQ7Z3S9 236 aa3.83□□□□□ -1.8
LSAMP-204ENST00000475403 CSAG1Q6PB30 78 aa3.82□□□□□ -1.8
LSAMP-204ENST00000475403 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
LSAMP-204ENST00000475403 IGHV6-1A0A0B4J1U7 121 aa3.79□□□□□ -1.8
LSAMP-204ENST00000475403 A0A0G2JQZ4 141 aa3.79□□□□□ -1.8
LSAMP-204ENST00000475403 ROMO1P60602 79 aa3.78□□□□□ -1.8
LSAMP-204ENST00000475403 PRLHP81277 87 aa3.78□□□□□ -1.8
LSAMP-204ENST00000475403 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
LSAMP-204ENST00000475403 LINC00483Q53H64 154 aa3.76□□□□□ -1.81
LSAMP-204ENST00000475403 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
LSAMP-204ENST00000475403 KRTAP13-1Q8IUC0 172 aa3.75□□□□□ -1.81
LSAMP-204ENST00000475403 ZNF706Q9Y5V0 76 aaPredicted RBP3.75□□□□□ -1.81
LSAMP-204ENST00000475403 KRTAP19-2Q3LHN2 52 aa3.74□□□□□ -1.81
LSAMP-204ENST00000475403 A8MUU9 505 aa3.73□□□□□ -1.81
LSAMP-204ENST00000475403 SPINK1P00995 79 aa3.73□□□□□ -1.81
LSAMP-204ENST00000475403 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
LSAMP-204ENST00000475403 IGKV2-30P06310 120 aa3.72□□□□□ -1.81
LSAMP-204ENST00000475403 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
LSAMP-204ENST00000475403 Q5W150 140 aa3.7□□□□□ -1.82
LSAMP-204ENST00000475403 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
LSAMP-204ENST00000475403 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
LSAMP-204ENST00000475403 USH2AO75445 5202 aa3.69□□□□□ -1.82
LSAMP-204ENST00000475403 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
LSAMP-204ENST00000475403 RPS29P62273 56 aaKnown RBP3.67□□□□□ -1.82
LSAMP-204ENST00000475403 IGKV2D-30A0A075B6S6 120 aa3.66□□□□□ -1.82
LSAMP-204ENST00000475403 IGLV9-49A0A0B4J1Y8 123 aa3.66□□□□□ -1.82
LSAMP-204ENST00000475403 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
LSAMP-204ENST00000475403 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.82
LSAMP-204ENST00000475403 C9orf92A6NGG3 77 aa3.65□□□□□ -1.83
LSAMP-204ENST00000475403 H0YAA0 97 aa3.61□□□□□ -1.83
LSAMP-204ENST00000475403 P0C880 135 aa3.61□□□□□ -1.83
LSAMP-204ENST00000475403 SSBP3-AS1Q7Z2R9 100 aa3.61□□□□□ -1.83
LSAMP-204ENST00000475403 KRTAP19-1Q8IUB9 90 aa3.61□□□□□ -1.83
LSAMP-204ENST00000475403 K7ERS5 55 aa3.6□□□□□ -1.83
LSAMP-204ENST00000475403 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
LSAMP-204ENST00000475403 KRTAP16-1A8MUX0 517 aa3.57□□□□□ -1.84
LSAMP-204ENST00000475403 H1FX-AS1Q4G0G2 97 aa3.56□□□□□ -1.84
LSAMP-204ENST00000475403 A0A1B0GU33 70 aa3.55□□□□□ -1.84
LSAMP-204ENST00000475403 RPL37P61927 97 aaKnown RBP3.55□□□□□ -1.84
LSAMP-204ENST00000475403 C20orf166-AS1Q96NR2 134 aa3.54□□□□□ -1.84
LSAMP-204ENST00000475403 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
LSAMP-204ENST00000475403 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
LSAMP-204ENST00000475403 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
LSAMP-204ENST00000475403 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
LSAMP-204ENST00000475403 SPINT4Q6UDR6 99 aa3.49□□□□□ -1.85
LSAMP-204ENST00000475403 NEBP20929 6669 aa3.49□□□□□ -1.85
LSAMP-204ENST00000475403 MT2AP02795 61 aa3.48□□□□□ -1.85
LSAMP-204ENST00000475403 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
LSAMP-204ENST00000475403 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
LSAMP-204ENST00000475403 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
LSAMP-204ENST00000475403 MT1FP04733 61 aa3.45□□□□□ -1.86
LSAMP-204ENST00000475403 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
LSAMP-204ENST00000475403 KRTAP9-3Q9BYQ3 159 aa3.43□□□□□ -1.86
LSAMP-204ENST00000475403 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
LSAMP-204ENST00000475403 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
LSAMP-204ENST00000475403 CRIPTQ9P021 101 aa3.37□□□□□ -1.87
LSAMP-204ENST00000475403 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
LSAMP-204ENST00000475403 KRTAP3-1Q9BYR8 98 aa3.35□□□□□ -1.87
LSAMP-204ENST00000475403 S4R3F8 94 aa3.28□□□□□ -1.88
LSAMP-204ENST00000475403 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
LSAMP-204ENST00000475403 KRTAP13-4Q3LI77 160 aa3.26□□□□□ -1.89
LSAMP-204ENST00000475403 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
LSAMP-204ENST00000475403 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
LSAMP-204ENST00000475403 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
LSAMP-204ENST00000475403 KMT2DO14686 5537 aa3.21□□□□□ -1.89
LSAMP-204ENST00000475403 KRTAP12-1P59990 96 aa3.21□□□□□ -1.9
LSAMP-204ENST00000475403 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
LSAMP-204ENST00000475403 A0A0D9SG42 100 aa3.19□□□□□ -1.9
LSAMP-204ENST00000475403 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms