RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
HLA-DOB-208ENST00000475235 P0C880 135 aa6.62□□□□□ -1.35
HLA-DOB-208ENST00000475235 KRTAP9-9Q9BYP9 154 aa6.62□□□□□ -1.35
HLA-DOB-208ENST00000475235 KRTAP9-4Q9BYQ2 154 aa6.62□□□□□ -1.35
HLA-DOB-208ENST00000475235 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
HLA-DOB-208ENST00000475235 SMIM29Q86T20 159 aa6.6□□□□□ -1.35
HLA-DOB-208ENST00000475235 Q8NBF4 154 aa6.6□□□□□ -1.35
HLA-DOB-208ENST00000475235 DMAC1Q96GE9 116 aa6.6□□□□□ -1.35
HLA-DOB-208ENST00000475235 UQCR11O14957 56 aa6.59□□□□□ -1.35
HLA-DOB-208ENST00000475235 SPINK1P00995 79 aa6.59□□□□□ -1.35
HLA-DOB-208ENST00000475235 SSBP3-AS1Q7Z2R9 100 aa6.59□□□□□ -1.35
HLA-DOB-208ENST00000475235 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
HLA-DOB-208ENST00000475235 LINC00575Q6W349 94 aa6.58□□□□□ -1.36
HLA-DOB-208ENST00000475235 DHRS4-AS1Q9P1J3 65 aa6.57□□□□□ -1.36
HLA-DOB-208ENST00000475235 RPS29P62273 56 aaKnown RBP6.55□□□□□ -1.36
HLA-DOB-208ENST00000475235 CAMK2N1Q7Z7J9 78 aa6.54□□□□□ -1.36
HLA-DOB-208ENST00000475235 ST20-AS1Q8NBB2 130 aa6.54□□□□□ -1.36
HLA-DOB-208ENST00000475235 MUC2Q02817 5179 aa6.52□□□□□ -1.37
HLA-DOB-208ENST00000475235 SPRR1BP22528 89 aa6.52□□□□□ -1.37
HLA-DOB-208ENST00000475235 IGLV8-61A0A075B6I0 122 aa6.49□□□□□ -1.37
HLA-DOB-208ENST00000475235 Q8N377 158 aa6.49□□□□□ -1.37
HLA-DOB-208ENST00000475235 Q6ZQY7 126 aa6.48□□□□□ -1.37
HLA-DOB-208ENST00000475235 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
HLA-DOB-208ENST00000475235 MUC17Q685J3 4493 aa6.47□□□□□ -1.37
HLA-DOB-208ENST00000475235 LCE4AQ5TA78 99 aa6.46□□□□□ -1.37
HLA-DOB-208ENST00000475235 KRTAP13-3Q3SY46 172 aa6.45□□□□□ -1.38
HLA-DOB-208ENST00000475235 DEFB105AQ8NG35 78 aa6.45□□□□□ -1.38
HLA-DOB-208ENST00000475235 IGLV5-48A0A075B6I7 105 aa6.43□□□□□ -1.38
HLA-DOB-208ENST00000475235 Q8N9L7 120 aa6.43□□□□□ -1.38
HLA-DOB-208ENST00000475235 A0A1B0GVX0 72 aa6.41□□□□□ -1.38
HLA-DOB-208ENST00000475235 Q5W150 140 aa6.41□□□□□ -1.38
HLA-DOB-208ENST00000475235 NDUFAF8A1L188 74 aa6.4□□□□□ -1.39
HLA-DOB-208ENST00000475235 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
HLA-DOB-208ENST00000475235 A8MUU9 505 aa6.37□□□□□ -1.39
HLA-DOB-208ENST00000475235 LCE1DQ5T752 114 aa6.37□□□□□ -1.39
HLA-DOB-208ENST00000475235 FAT4Q6V0I7 4981 aa6.35□□□□□ -1.39
HLA-DOB-208ENST00000475235 DSCR10P59022 87 aa6.31□□□□□ -1.4
HLA-DOB-208ENST00000475235 A0A1B0GU69 56 aa6.3□□□□□ -1.4
HLA-DOB-208ENST00000475235 A0A0G2JQZ4 141 aa6.3□□□□□ -1.4
HLA-DOB-208ENST00000475235 HRES1P13985 223 aa6.3□□□□□ -1.4
HLA-DOB-208ENST00000475235 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
HLA-DOB-208ENST00000475235 LINC00472Q9H8W2 130 aa6.3□□□□□ -1.4
HLA-DOB-208ENST00000475235 C9orf92A6NGG3 77 aa6.28□□□□□ -1.4
HLA-DOB-208ENST00000475235 IGFL1Q6UW32 110 aa6.26□□□□□ -1.41
HLA-DOB-208ENST00000475235 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
HLA-DOB-208ENST00000475235 KRTAP4-1Q9BYQ7 146 aa6.24□□□□□ -1.41
HLA-DOB-208ENST00000475235 K7EQZ3 153 aa6.23□□□□□ -1.41
HLA-DOB-208ENST00000475235 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
HLA-DOB-208ENST00000475235 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
HLA-DOB-208ENST00000475235 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
HLA-DOB-208ENST00000475235 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
HLA-DOB-208ENST00000475235 ACYP2P14621 99 aa6.2□□□□□ -1.42
HLA-DOB-208ENST00000475235 RPL37P61927 97 aaKnown RBP6.19□□□□□ -1.42
HLA-DOB-208ENST00000475235 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
HLA-DOB-208ENST00000475235 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
HLA-DOB-208ENST00000475235 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.43
HLA-DOB-208ENST00000475235 A0A1B0GU33 70 aa6.1□□□□□ -1.43
HLA-DOB-208ENST00000475235 KRTAP19-2Q3LHN2 52 aa6.09□□□□□ -1.44
HLA-DOB-208ENST00000475235 Q96NJ1 140 aa6.09□□□□□ -1.44
HLA-DOB-208ENST00000475235 WFDC13Q8IUB5 93 aa6.08□□□□□ -1.44
HLA-DOB-208ENST00000475235 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
HLA-DOB-208ENST00000475235 MT1HP80294 61 aa6.04□□□□□ -1.44
HLA-DOB-208ENST00000475235 COX6B2Q6YFQ2 88 aa6.03□□□□□ -1.44
HLA-DOB-208ENST00000475235 KRTAP4-11Q9BYQ6 195 aa5.98□□□□□ -1.45
HLA-DOB-208ENST00000475235 M0R2T5 61 aa5.96□□□□□ -1.46
HLA-DOB-208ENST00000475235 DEFB116Q30KQ4 102 aa5.94□□□□□ -1.46
HLA-DOB-208ENST00000475235 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
HLA-DOB-208ENST00000475235 KRTAP10-6P60371 365 aaPredicted RBP5.92□□□□□ -1.46
HLA-DOB-208ENST00000475235 MMP24-AS1A0A0U1RRL7 71 aa5.9□□□□□ -1.46
HLA-DOB-208ENST00000475235 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
HLA-DOB-208ENST00000475235 FLGP20930 4061 aaPredicted RBP5.88□□□□□ -1.47
HLA-DOB-208ENST00000475235 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
HLA-DOB-208ENST00000475235 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
HLA-DOB-208ENST00000475235 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
HLA-DOB-208ENST00000475235 H0YAA0 97 aa5.75□□□□□ -1.49
HLA-DOB-208ENST00000475235 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
HLA-DOB-208ENST00000475235 CRIPTQ9P021 101 aa5.69□□□□□ -1.5
HLA-DOB-208ENST00000475235 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
HLA-DOB-208ENST00000475235 MT2AP02795 61 aa5.63□□□□□ -1.51
HLA-DOB-208ENST00000475235 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
HLA-DOB-208ENST00000475235 R4GN34 69 aa5.61□□□□□ -1.51
HLA-DOB-208ENST00000475235 INE1O15225 51 aa5.58□□□□□ -1.52
HLA-DOB-208ENST00000475235 USH2AO75445 5202 aa5.58□□□□□ -1.52
HLA-DOB-208ENST00000475235 MT1FP04733 61 aa5.58□□□□□ -1.52
HLA-DOB-208ENST00000475235 KRTAP10-10P60014 251 aa5.58□□□□□ -1.52
HLA-DOB-208ENST00000475235 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
HLA-DOB-208ENST00000475235 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
HLA-DOB-208ENST00000475235 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
HLA-DOB-208ENST00000475235 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
HLA-DOB-208ENST00000475235 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
HLA-DOB-208ENST00000475235 S4R3F8 94 aa5.35□□□□□ -1.55
HLA-DOB-208ENST00000475235 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
HLA-DOB-208ENST00000475235 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
HLA-DOB-208ENST00000475235 MACF1Q9UPN3 7388 aaKnown RBP5.25□□□□□ -1.57
HLA-DOB-208ENST00000475235 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
HLA-DOB-208ENST00000475235 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
HLA-DOB-208ENST00000475235 PP632Q6XCG6 107 aa5.15□□□□□ -1.58
HLA-DOB-208ENST00000475235 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
HLA-DOB-208ENST00000475235 MT1BP07438 61 aa5.13□□□□□ -1.59
HLA-DOB-208ENST00000475235 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms