RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 DNAH2Q9P225 4427 aa3.74□□□□□ -1.81
PHTF1-209ENST00000474926 DYNC1H1Q14204 4646 aaKnown RBP3.74□□□□□ -1.81
PHTF1-209ENST00000474926 KRTAP25-1Q3LHN0 102 aa3.71□□□□□ -1.82
PHTF1-209ENST00000474926 DNAH8Q96JB1 4490 aa3.71□□□□□ -1.82
PHTF1-209ENST00000474926 PLAC4Q8WY50 150 aa3.7□□□□□ -1.82
PHTF1-209ENST00000474926 DNAH7Q8WXX0 4024 aa3.69□□□□□ -1.82
PHTF1-209ENST00000474926 DYNC2H1Q8NCM8 4307 aaKnown RBP3.69□□□□□ -1.82
PHTF1-209ENST00000474926 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
PHTF1-209ENST00000474926 DNAH6Q9C0G6 4158 aa3.63□□□□□ -1.83
PHTF1-209ENST00000474926 FRAS1Q86XX4 4008 aa3.62□□□□□ -1.83
PHTF1-209ENST00000474926 RYR1P21817 5038 aa3.62□□□□□ -1.83
PHTF1-209ENST00000474926 VPS13BQ7Z7G8 4022 aa3.62□□□□□ -1.83
PHTF1-209ENST00000474926 KIAA1109Q2LD37 5005 aa3.62□□□□□ -1.83
PHTF1-209ENST00000474926 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
PHTF1-209ENST00000474926 HYDINQ4G0P3 5121 aa3.61□□□□□ -1.83
PHTF1-209ENST00000474926 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
PHTF1-209ENST00000474926 FAT2Q9NYQ8 4349 aa3.6□□□□□ -1.83
PHTF1-209ENST00000474926 KRTAP13-4Q3LI77 160 aa3.6□□□□□ -1.83
PHTF1-209ENST00000474926 SACSQ9NZJ4 4579 aa3.59□□□□□ -1.83
PHTF1-209ENST00000474926 KRTAP12-2P59991 146 aa3.59□□□□□ -1.84
PHTF1-209ENST00000474926 KRTAP3-3Q9BYR6 98 aa3.59□□□□□ -1.84
PHTF1-209ENST00000474926 HECTD4Q9Y4D8 3996 aa3.59□□□□□ -1.84
PHTF1-209ENST00000474926 KRTAP10-10P60014 251 aa3.58□□□□□ -1.84
PHTF1-209ENST00000474926 MYCBP2O75592 4640 aa3.57□□□□□ -1.84
PHTF1-209ENST00000474926 RYR3Q15413 4870 aa3.56□□□□□ -1.84
PHTF1-209ENST00000474926 TNP1P09430 55 aa3.56□□□□□ -1.84
PHTF1-209ENST00000474926 APOBP04114 4563 aaKnown RBP3.55□□□□□ -1.84
PHTF1-209ENST00000474926 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
PHTF1-209ENST00000474926 LRP1Q07954 4544 aaKnown RBP3.54□□□□□ -1.84
PHTF1-209ENST00000474926 KRTAP3-2Q9BYR7 98 aa3.53□□□□□ -1.84
PHTF1-209ENST00000474926 KRTAP17-1Q9BYP8 105 aa3.53□□□□□ -1.85
PHTF1-209ENST00000474926 PKHD1P08F94 4074 aa3.52□□□□□ -1.85
PHTF1-209ENST00000474926 RYR2Q92736 4967 aa3.51□□□□□ -1.85
PHTF1-209ENST00000474926 FAT3Q8TDW7 4589 aa3.47□□□□□ -1.85
PHTF1-209ENST00000474926 KMT2CQ8NEZ4 4911 aaKnown RBP3.47□□□□□ -1.85
PHTF1-209ENST00000474926 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
PHTF1-209ENST00000474926 KRTAP4-1Q9BYQ7 146 aa3.43□□□□□ -1.86
PHTF1-209ENST00000474926 PP632Q6XCG6 107 aa3.43□□□□□ -1.86
PHTF1-209ENST00000474926 PKD1P98161 4303 aa3.41□□□□□ -1.86
PHTF1-209ENST00000474926 LORP23490 312 aaPredicted RBP3.4□□□□□ -1.86
PHTF1-209ENST00000474926 HSPG2P98160 4391 aa3.38□□□□□ -1.87
PHTF1-209ENST00000474926 HERC2O95714 4834 aa3.36□□□□□ -1.87
PHTF1-209ENST00000474926 LRP2P98164 4655 aa3.34□□□□□ -1.87
PHTF1-209ENST00000474926 PRO2289Q9P1D8 64 aa3.33□□□□□ -1.88
PHTF1-209ENST00000474926 EPPK1P58107 5090 aaKnown RBP3.29□□□□□ -1.88
PHTF1-209ENST00000474926 LPAP08519 4548 aa3.25□□□□□ -1.89
PHTF1-209ENST00000474926 BIRC6Q9NR09 4857 aa3.24□□□□□ -1.89
PHTF1-209ENST00000474926 MT1HP80294 61 aa3.21□□□□□ -1.9
PHTF1-209ENST00000474926 PKHD1L1Q86WI1 4243 aa3.2□□□□□ -1.9
PHTF1-209ENST00000474926 TNXBP22105 4242 aa3.2□□□□□ -1.9
PHTF1-209ENST00000474926 ABCA13Q86UQ4 5058 aa3.2□□□□□ -1.9
PHTF1-209ENST00000474926 MT2AP02795 61 aa3.15□□□□□ -1.9
PHTF1-209ENST00000474926 MT1FP04733 61 aa3.13□□□□□ -1.91
PHTF1-209ENST00000474926 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
PHTF1-209ENST00000474926 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
PHTF1-209ENST00000474926 HERC1Q15751 4861 aa3.12□□□□□ -1.91
PHTF1-209ENST00000474926 PCLOQ9Y6V0 5065 aa3.11□□□□□ -1.91
PHTF1-209ENST00000474926 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
PHTF1-209ENST00000474926 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
PHTF1-209ENST00000474926 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
PHTF1-209ENST00000474926 LCE2CQ5TA81 110 aa3.05□□□□□ -1.92
PHTF1-209ENST00000474926 KRTAP19-1Q8IUB9 90 aa3.04□□□□□ -1.92
PHTF1-209ENST00000474926 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
PHTF1-209ENST00000474926 MUC2Q02817 5179 aa3.02□□□□□ -1.93
PHTF1-209ENST00000474926 KRTAP23-1A1A580 65 aa3.01□□□□□ -1.93
PHTF1-209ENST00000474926 KRTAP9-8Q9BYQ0 159 aa2.98□□□□□ -1.93
PHTF1-209ENST00000474926 RNF213Q63HN8 5207 aa2.98□□□□□ -1.93
PHTF1-209ENST00000474926 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
PHTF1-209ENST00000474926 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
PHTF1-209ENST00000474926 FLGP20930 4061 aaPredicted RBP2.94□□□□□ -1.94
PHTF1-209ENST00000474926 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
PHTF1-209ENST00000474926 KRTAP19-8Q3LI54 63 aa2.93□□□□□ -1.94
PHTF1-209ENST00000474926 LCE2DQ5TA82 110 aaPredicted RBP2.92□□□□□ -1.94
PHTF1-209ENST00000474926 HMCN2Q8NDA2 5059 aa2.92□□□□□ -1.94
PHTF1-209ENST00000474926 MT1BP07438 61 aa2.91□□□□□ -1.94
PHTF1-209ENST00000474926 CRCT1Q9UGL9 99 aa2.9□□□□□ -1.95
PHTF1-209ENST00000474926 KRTAP10-7P60409 375 aaPredicted RBP2.89□□□□□ -1.95
PHTF1-209ENST00000474926 MT1XP80297 61 aa2.88□□□□□ -1.95
PHTF1-209ENST00000474926 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
PHTF1-209ENST00000474926 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
PHTF1-209ENST00000474926 KRTAP9-6A0A140TA67 174 aa2.87□□□□□ -1.95
PHTF1-209ENST00000474926 KRTAP10-5P60370 271 aa2.86□□□□□ -1.95
PHTF1-209ENST00000474926 KRTAP19-5Q3LI72 72 aa2.85□□□□□ -1.95
PHTF1-209ENST00000474926 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
PHTF1-209ENST00000474926 KRTAP9-2Q9BYQ4 174 aa2.81□□□□□ -1.96
PHTF1-209ENST00000474926 LCE2BO14633 110 aa2.8□□□□□ -1.96
PHTF1-209ENST00000474926 KRTAP4-8A0A0G2JLE6 195 aa2.78□□□□□ -1.96
PHTF1-209ENST00000474926 KRTAP4-8Q9BYQ9 185 aa2.78□□□□□ -1.96
PHTF1-209ENST00000474926 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
PHTF1-209ENST00000474926 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
PHTF1-209ENST00000474926 LCE2AQ5TA79 106 aaPredicted RBP2.7□□□□□ -1.98
PHTF1-209ENST00000474926 INE1O15225 51 aa2.68□□□□□ -1.98
PHTF1-209ENST00000474926 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
PHTF1-209ENST00000474926 KRTAP4-7Q9BYR0 210 aa2.61□□□□□ -1.99
PHTF1-209ENST00000474926 USH2AO75445 5202 aa2.61□□□□□ -1.99
PHTF1-209ENST00000474926 KRTAP9-7A8MTY7 169 aa2.57□□□□□ -2
PHTF1-209ENST00000474926 MT1GP13640 62 aa2.56□□□□□ -2
PHTF1-209ENST00000474926 KRTAP19-6Q3LI70 58 aa2.55□□□□□ -2
PHTF1-209ENST00000474926 KRTAP19-4Q3LI73 84 aa2.55□□□□□ -2
PHTF1-209ENST00000474926 MT1EP04732 61 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms