RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 UQCRQO14949 82 aa6.27□□□□□ -1.41
DNMT3A-211ENST00000474887 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
DNMT3A-211ENST00000474887 IMUPQ9GZP8 106 aa6.26□□□□□ -1.41
DNMT3A-211ENST00000474887 PCP4L1A6NKN8 68 aa6.21□□□□□ -1.42
DNMT3A-211ENST00000474887 A8MUN3 132 aa6.21□□□□□ -1.42
DNMT3A-211ENST00000474887 H0YAA0 97 aa6.21□□□□□ -1.42
DNMT3A-211ENST00000474887 NDUFC1O43677 76 aa6.21□□□□□ -1.42
DNMT3A-211ENST00000474887 KRTAP10-5P60370 271 aa6.21□□□□□ -1.42
DNMT3A-211ENST00000474887 HIST1H4AP62805 103 aaKnown RBP6.2□□□□□ -1.42
DNMT3A-211ENST00000474887 H0Y9P7 68 aa6.18□□□□□ -1.42
DNMT3A-211ENST00000474887 LINC00643Q86TS7 51 aa6.16□□□□□ -1.42
DNMT3A-211ENST00000474887 A0A087WVE0 104 aa6.15□□□□□ -1.42
DNMT3A-211ENST00000474887 NEBP20929 6669 aa6.15□□□□□ -1.43
DNMT3A-211ENST00000474887 MP68P56378 58 aa6.1□□□□□ -1.43
DNMT3A-211ENST00000474887 LINC00208Q96KT6 92 aa6.08□□□□□ -1.44
DNMT3A-211ENST00000474887 MUC12Q9UKN1 5478 aa6.05□□□□□ -1.44
DNMT3A-211ENST00000474887 KRTAP5-9P26371 169 aa6.05□□□□□ -1.44
DNMT3A-211ENST00000474887 H3BPC8 53 aa6.04□□□□□ -1.44
DNMT3A-211ENST00000474887 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
DNMT3A-211ENST00000474887 OCR1Q9BZK8 76 aa6.04□□□□□ -1.44
DNMT3A-211ENST00000474887 C20orf197Q8N268 126 aa6.02□□□□□ -1.45
DNMT3A-211ENST00000474887 PRO2289Q9P1D8 64 aa6.02□□□□□ -1.45
DNMT3A-211ENST00000474887 KMT2DO14686 5537 aa5.99□□□□□ -1.45
DNMT3A-211ENST00000474887 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
DNMT3A-211ENST00000474887 J3QR89 54 aa5.97□□□□□ -1.45
DNMT3A-211ENST00000474887 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
DNMT3A-211ENST00000474887 R4GN34 69 aa5.94□□□□□ -1.46
DNMT3A-211ENST00000474887 DMAC1Q96GE9 116 aa5.93□□□□□ -1.46
DNMT3A-211ENST00000474887 KRTAP20-1Q3LI63 56 aa5.92□□□□□ -1.46
DNMT3A-211ENST00000474887 SCGB1A1P11684 91 aa5.91□□□□□ -1.46
DNMT3A-211ENST00000474887 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
DNMT3A-211ENST00000474887 MT1XP80297 61 aa5.88□□□□□ -1.47
DNMT3A-211ENST00000474887 A0A1B0GV90 55 aa5.87□□□□□ -1.47
DNMT3A-211ENST00000474887 TRAV7A0A075B6U4 112 aa5.86□□□□□ -1.47
DNMT3A-211ENST00000474887 P0C880 135 aa5.86□□□□□ -1.47
DNMT3A-211ENST00000474887 M0QZ58 72 aa5.85□□□□□ -1.47
DNMT3A-211ENST00000474887 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
DNMT3A-211ENST00000474887 ACYP2P14621 99 aa5.82□□□□□ -1.48
DNMT3A-211ENST00000474887 SPTSSBQ8NFR3 76 aa5.81□□□□□ -1.48
DNMT3A-211ENST00000474887 SMIM20Q8N5G0 67 aa5.8□□□□□ -1.48
DNMT3A-211ENST00000474887 SPRR2FQ96RM1 72 aa5.8□□□□□ -1.48
DNMT3A-211ENST00000474887 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
DNMT3A-211ENST00000474887 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
DNMT3A-211ENST00000474887 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
DNMT3A-211ENST00000474887 LINC01554Q52M75 96 aa5.74□□□□□ -1.49
DNMT3A-211ENST00000474887 SPRR2EP22531 72 aa5.73□□□□□ -1.49
DNMT3A-211ENST00000474887 SPRR2BP35325 72 aa5.73□□□□□ -1.49
DNMT3A-211ENST00000474887 SPRR2AP35326 72 aa5.73□□□□□ -1.49
DNMT3A-211ENST00000474887 CHKB-CPT1BH3BT56 60 aa5.67□□□□□ -1.5
DNMT3A-211ENST00000474887 MT-ATP8P03928 68 aa5.67□□□□□ -1.5
DNMT3A-211ENST00000474887 K7ERU9 68 aa5.66□□□□□ -1.5
DNMT3A-211ENST00000474887 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
DNMT3A-211ENST00000474887 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
DNMT3A-211ENST00000474887 SPANXA2-OT1Q8N9U9 137 aa5.61□□□□□ -1.51
DNMT3A-211ENST00000474887 KRTAP4-8A0A0G2JLE6 195 aa5.6□□□□□ -1.51
DNMT3A-211ENST00000474887 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
DNMT3A-211ENST00000474887 KRTAP2-2Q9BYT5 123 aa5.6□□□□□ -1.51
DNMT3A-211ENST00000474887 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
DNMT3A-211ENST00000474887 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
DNMT3A-211ENST00000474887 SPRR2DP22532 72 aa5.55□□□□□ -1.52
DNMT3A-211ENST00000474887 SNURFQ9Y675 71 aa5.53□□□□□ -1.52
DNMT3A-211ENST00000474887 SERP2Q8N6R1 65 aa5.5□□□□□ -1.53
DNMT3A-211ENST00000474887 CAMK2N1Q7Z7J9 78 aa5.45□□□□□ -1.54
DNMT3A-211ENST00000474887 SEC61GP60059 68 aa5.42□□□□□ -1.54
DNMT3A-211ENST00000474887 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
DNMT3A-211ENST00000474887 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
DNMT3A-211ENST00000474887 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
DNMT3A-211ENST00000474887 COA5Q86WW8 74 aa5.37□□□□□ -1.55
DNMT3A-211ENST00000474887 A0A1B0GU33 70 aa5.29□□□□□ -1.56
DNMT3A-211ENST00000474887 COX7CP15954 63 aa5.28□□□□□ -1.56
DNMT3A-211ENST00000474887 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
DNMT3A-211ENST00000474887 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
DNMT3A-211ENST00000474887 A0A0D9SG42 100 aa5.25□□□□□ -1.57
DNMT3A-211ENST00000474887 MT1EP04732 61 aa5.22□□□□□ -1.57
DNMT3A-211ENST00000474887 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
DNMT3A-211ENST00000474887 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
DNMT3A-211ENST00000474887 KRTAP19-3Q7Z4W3 81 aa5.22□□□□□ -1.57
DNMT3A-211ENST00000474887 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.58
DNMT3A-211ENST00000474887 H7BZZ5 65 aa5.21□□□□□ -1.58
DNMT3A-211ENST00000474887 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
DNMT3A-211ENST00000474887 SMIM26A0A096LP01 95 aa5.18□□□□□ -1.58
DNMT3A-211ENST00000474887 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
DNMT3A-211ENST00000474887 A0A1B0GU69 56 aa5.14□□□□□ -1.59
DNMT3A-211ENST00000474887 MT1GP13640 62 aa5.14□□□□□ -1.59
DNMT3A-211ENST00000474887 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
DNMT3A-211ENST00000474887 CYSTM1Q9H1C7 97 aa5.1□□□□□ -1.59
DNMT3A-211ENST00000474887 KRTAP19-5Q3LI72 72 aa5.09□□□□□ -1.59
DNMT3A-211ENST00000474887 TNP1P09430 55 aa5.03□□□□□ -1.6
DNMT3A-211ENST00000474887 ANAPC13Q9BS18 74 aa5.02□□□□□ -1.61
DNMT3A-211ENST00000474887 PRR15LQ9BU68 103 aa5.02□□□□□ -1.61
DNMT3A-211ENST00000474887 A8MU10 97 aa4.99□□□□□ -1.61
DNMT3A-211ENST00000474887 ATP5EP56381 51 aaPredicted RBP4.99□□□□□ -1.61
DNMT3A-211ENST00000474887 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
DNMT3A-211ENST00000474887 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
DNMT3A-211ENST00000474887 MT1MQ8N339 61 aa4.98□□□□□ -1.61
DNMT3A-211ENST00000474887 MT1LQ93083 61 aa4.98□□□□□ -1.61
DNMT3A-211ENST00000474887 C10orf95Q9H7T3 257 aa4.95□□□□□ -1.62
DNMT3A-211ENST00000474887 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
DNMT3A-211ENST00000474887 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
DNMT3A-211ENST00000474887 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms