RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 hDV103S1A0JD37 113 aa3.08□□□□□ -1.92
CPSF7-210ENST00000474684 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
CPSF7-210ENST00000474684 OCR1Q9BZK8 76 aa3.08□□□□□ -1.92
CPSF7-210ENST00000474684 SNURFQ9Y675 71 aa3.08□□□□□ -1.92
CPSF7-210ENST00000474684 USH2AO75445 5202 aa3.08□□□□□ -1.92
CPSF7-210ENST00000474684 M0R2T5 61 aa3.07□□□□□ -1.92
CPSF7-210ENST00000474684 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
CPSF7-210ENST00000474684 SPANXA2-OT1Q8N9U9 137 aa3.07□□□□□ -1.92
CPSF7-210ENST00000474684 ATP11AUNQ6ZP68 121 aa3.06□□□□□ -1.92
CPSF7-210ENST00000474684 Q75L30 129 aa3.06□□□□□ -1.92
CPSF7-210ENST00000474684 MPLKIPQ8TAP9 179 aa3.05□□□□□ -1.92
CPSF7-210ENST00000474684 Q96NJ1 140 aa3.05□□□□□ -1.92
CPSF7-210ENST00000474684 IGKV4-1P06312 121 aa3.04□□□□□ -1.92
CPSF7-210ENST00000474684 MP68P56378 58 aa3.04□□□□□ -1.92
CPSF7-210ENST00000474684 A0A087WSZ3 146 aa3.03□□□□□ -1.92
CPSF7-210ENST00000474684 A8MUU9 505 aa3.03□□□□□ -1.92
CPSF7-210ENST00000474684 HCG22E2RYF7 251 aa3.03□□□□□ -1.92
CPSF7-210ENST00000474684 DSCR10P59022 87 aa3.03□□□□□ -1.92
CPSF7-210ENST00000474684 ZCCHC13Q8WW36 166 aaKnown RBP3.03□□□□□ -1.92
CPSF7-210ENST00000474684 C20orf166-AS1Q96NR2 134 aa3.03□□□□□ -1.92
CPSF7-210ENST00000474684 TRAV22A0A0B4J277 110 aa3.02□□□□□ -1.93
CPSF7-210ENST00000474684 A0A1W2PNM2 257 aa3.02□□□□□ -1.93
CPSF7-210ENST00000474684 KRTAP16-1A8MUX0 517 aa3.02□□□□□ -1.93
CPSF7-210ENST00000474684 C1orf64Q8NEQ6 169 aa3.02□□□□□ -1.93
CPSF7-210ENST00000474684 LOC101927531A0A1B0GV80 90 aa3□□□□□ -1.93
CPSF7-210ENST00000474684 NOTCH2NLQ7Z3S9 236 aa3□□□□□ -1.93
CPSF7-210ENST00000474684 C7orf65Q6ZTY9 151 aa2.99□□□□□ -1.93
CPSF7-210ENST00000474684 LINC00208Q96KT6 92 aa2.99□□□□□ -1.93
CPSF7-210ENST00000474684 MT2AP02795 61 aa2.98□□□□□ -1.93
CPSF7-210ENST00000474684 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
CPSF7-210ENST00000474684 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
CPSF7-210ENST00000474684 CHKB-CPT1BH3BT56 60 aa2.97□□□□□ -1.93
CPSF7-210ENST00000474684 MT1FP04733 61 aa2.97□□□□□ -1.93
CPSF7-210ENST00000474684 HRES1P13985 223 aa2.97□□□□□ -1.93
CPSF7-210ENST00000474684 DEFB116Q30KQ4 102 aa2.97□□□□□ -1.93
CPSF7-210ENST00000474684 LCA10Q71F78 164 aa2.97□□□□□ -1.93
CPSF7-210ENST00000474684 Q5VV11 94 aa2.96□□□□□ -1.94
CPSF7-210ENST00000474684 Q8N9P0 234 aaPredicted RBP2.96□□□□□ -1.94
CPSF7-210ENST00000474684 RBM12B-AS1Q9P1G2 102 aa2.96□□□□□ -1.94
CPSF7-210ENST00000474684 A6NED7 52 aa2.95□□□□□ -1.94
CPSF7-210ENST00000474684 PSPHP1O15172 72 aa2.95□□□□□ -1.94
CPSF7-210ENST00000474684 LINC00472Q9H8W2 130 aa2.95□□□□□ -1.94
CPSF7-210ENST00000474684 TP53AIP1Q9HCN2 124 aa2.95□□□□□ -1.94
CPSF7-210ENST00000474684 A8MUN3 132 aa2.94□□□□□ -1.94
CPSF7-210ENST00000474684 LINC00313P59037 77 aa2.94□□□□□ -1.94
CPSF7-210ENST00000474684 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
CPSF7-210ENST00000474684 CASC2Q6XLA1 102 aa2.94□□□□□ -1.94
CPSF7-210ENST00000474684 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
CPSF7-210ENST00000474684 IGHV6-1A0A0B4J1U7 121 aa2.93□□□□□ -1.94
CPSF7-210ENST00000474684 A6NN06 94 aa2.93□□□□□ -1.94
CPSF7-210ENST00000474684 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
CPSF7-210ENST00000474684 LINC01558Q9Y6Z2 57 aa2.93□□□□□ -1.94
CPSF7-210ENST00000474684 A0A1B0GVX0 72 aa2.91□□□□□ -1.94
CPSF7-210ENST00000474684 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
CPSF7-210ENST00000474684 SPTSSBQ8NFR3 76 aa2.91□□□□□ -1.94
CPSF7-210ENST00000474684 H0Y9P7 68 aa2.9□□□□□ -1.95
CPSF7-210ENST00000474684 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
CPSF7-210ENST00000474684 Q8N9L7 120 aa2.9□□□□□ -1.95
CPSF7-210ENST00000474684 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
CPSF7-210ENST00000474684 K7EQZ3 153 aa2.89□□□□□ -1.95
CPSF7-210ENST00000474684 COA5Q86WW8 74 aa2.89□□□□□ -1.95
CPSF7-210ENST00000474684 A8MWP4 228 aa2.88□□□□□ -1.95
CPSF7-210ENST00000474684 C8orf87E5RJ46 101 aa2.88□□□□□ -1.95
CPSF7-210ENST00000474684 KRTAP10-10P60014 251 aa2.88□□□□□ -1.95
CPSF7-210ENST00000474684 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
CPSF7-210ENST00000474684 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
CPSF7-210ENST00000474684 SPINK7P58062 85 aa2.86□□□□□ -1.95
CPSF7-210ENST00000474684 WFDC13Q8IUB5 93 aa2.86□□□□□ -1.95
CPSF7-210ENST00000474684 C8orf17Q9NRJ1 99 aa2.86□□□□□ -1.95
CPSF7-210ENST00000474684 LINC01554Q52M75 96 aa2.85□□□□□ -1.95
CPSF7-210ENST00000474684 MMP24-AS1A0A0U1RRL7 71 aa2.83□□□□□ -1.96
CPSF7-210ENST00000474684 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
CPSF7-210ENST00000474684 ACYP2P14621 99 aa2.82□□□□□ -1.96
CPSF7-210ENST00000474684 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
CPSF7-210ENST00000474684 UQCR11O14957 56 aa2.79□□□□□ -1.96
CPSF7-210ENST00000474684 SPATA8Q6RVD6 105 aa2.79□□□□□ -1.96
CPSF7-210ENST00000474684 MRPL34Q9BQ48 92 aaKnown RBP2.79□□□□□ -1.96
CPSF7-210ENST00000474684 IGKV2D-30A0A075B6S6 120 aa2.77□□□□□ -1.97
CPSF7-210ENST00000474684 A0A1B0GU69 56 aa2.77□□□□□ -1.97
CPSF7-210ENST00000474684 IGKV2-30P06310 120 aa2.77□□□□□ -1.97
CPSF7-210ENST00000474684 Q5W150 140 aa2.77□□□□□ -1.97
CPSF7-210ENST00000474684 NEBP20929 6669 aa2.76□□□□□ -1.97
CPSF7-210ENST00000474684 H1FX-AS1Q4G0G2 97 aa2.75□□□□□ -1.97
CPSF7-210ENST00000474684 DMAC1Q96GE9 116 aa2.75□□□□□ -1.97
CPSF7-210ENST00000474684 A8MU10 97 aa2.74□□□□□ -1.97
CPSF7-210ENST00000474684 MIR22HGQ0VDD5 57 aa2.74□□□□□ -1.97
CPSF7-210ENST00000474684 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
CPSF7-210ENST00000474684 MT1BP07438 61 aa2.71□□□□□ -1.98
CPSF7-210ENST00000474684 KRTAP6-3Q3LI67 103 aa2.7□□□□□ -1.98
CPSF7-210ENST00000474684 K7ERS5 55 aa2.68□□□□□ -1.98
CPSF7-210ENST00000474684 PRAC1Q96KF2 57 aa2.66□□□□□ -1.98
CPSF7-210ENST00000474684 S4R3F8 94 aa2.66□□□□□ -1.98
CPSF7-210ENST00000474684 ROMO1P60602 79 aa2.65□□□□□ -1.99
CPSF7-210ENST00000474684 KRTAP19-8Q3LI54 63 aa2.65□□□□□ -1.99
CPSF7-210ENST00000474684 CSAG1Q6PB30 78 aa2.65□□□□□ -1.99
CPSF7-210ENST00000474684 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
CPSF7-210ENST00000474684 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
CPSF7-210ENST00000474684 MT3P25713 68 aa2.63□□□□□ -1.99
CPSF7-210ENST00000474684 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
CPSF7-210ENST00000474684 KMT2DO14686 5537 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms