RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 CASC2Q6XLA1 102 aa6.39□□□□□ -1.39
SHROOM3-204ENST00000473602 NDUFC1O43677 76 aa6.38□□□□□ -1.39
SHROOM3-204ENST00000473602 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
SHROOM3-204ENST00000473602 Q8N9L7 120 aa6.38□□□□□ -1.39
SHROOM3-204ENST00000473602 KRTAP4-2Q9BYR5 136 aa6.37□□□□□ -1.39
SHROOM3-204ENST00000473602 TRAV7A0A075B6U4 112 aa6.36□□□□□ -1.39
SHROOM3-204ENST00000473602 H3BS24 57 aa6.35□□□□□ -1.39
SHROOM3-204ENST00000473602 MT1FP04733 61 aa6.35□□□□□ -1.39
SHROOM3-204ENST00000473602 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
SHROOM3-204ENST00000473602 HCG22E2RYF7 251 aa6.33□□□□□ -1.4
SHROOM3-204ENST00000473602 C7orf65Q6ZTY9 151 aa6.33□□□□□ -1.4
SHROOM3-204ENST00000473602 ATP5EP56381 51 aaPredicted RBP6.32□□□□□ -1.4
SHROOM3-204ENST00000473602 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
SHROOM3-204ENST00000473602 Q5W150 140 aa6.32□□□□□ -1.4
SHROOM3-204ENST00000473602 IGKV2D-30A0A075B6S6 120 aa6.3□□□□□ -1.4
SHROOM3-204ENST00000473602 IGKV2-30P06310 120 aa6.3□□□□□ -1.4
SHROOM3-204ENST00000473602 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
SHROOM3-204ENST00000473602 A0A087WVE0 104 aa6.27□□□□□ -1.41
SHROOM3-204ENST00000473602 H1FX-AS1Q4G0G2 97 aa6.26□□□□□ -1.41
SHROOM3-204ENST00000473602 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
SHROOM3-204ENST00000473602 TP53AIP1Q9HCN2 124 aa6.23□□□□□ -1.41
SHROOM3-204ENST00000473602 NEBP20929 6669 aa6.22□□□□□ -1.41
SHROOM3-204ENST00000473602 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
SHROOM3-204ENST00000473602 C20orf197Q8N268 126 aa6.21□□□□□ -1.42
SHROOM3-204ENST00000473602 SVIPQ8NHG7 77 aa6.21□□□□□ -1.42
SHROOM3-204ENST00000473602 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
SHROOM3-204ENST00000473602 KRTAP4-11Q9BYQ6 195 aa6.19□□□□□ -1.42
SHROOM3-204ENST00000473602 SERP1Q9Y6X1 66 aa6.19□□□□□ -1.42
SHROOM3-204ENST00000473602 C4orf26Q17RF5 130 aa6.18□□□□□ -1.42
SHROOM3-204ENST00000473602 C5orf47Q569G3 176 aa6.18□□□□□ -1.42
SHROOM3-204ENST00000473602 H3BPC8 53 aa6.15□□□□□ -1.42
SHROOM3-204ENST00000473602 H7BZZ5 65 aa6.14□□□□□ -1.43
SHROOM3-204ENST00000473602 OCR1Q9BZK8 76 aa6.14□□□□□ -1.43
SHROOM3-204ENST00000473602 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
SHROOM3-204ENST00000473602 MP68P56378 58 aa6.1□□□□□ -1.43
SHROOM3-204ENST00000473602 TRAV22A0A0B4J277 110 aa6.09□□□□□ -1.43
SHROOM3-204ENST00000473602 C1orf64Q8NEQ6 169 aa6.09□□□□□ -1.43
SHROOM3-204ENST00000473602 MUC12Q9UKN1 5478 aa6.09□□□□□ -1.44
SHROOM3-204ENST00000473602 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
SHROOM3-204ENST00000473602 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
SHROOM3-204ENST00000473602 CYP4F30PQ9H0H9 118 aa6.06□□□□□ -1.44
SHROOM3-204ENST00000473602 S4R3F8 94 aa6.06□□□□□ -1.44
SHROOM3-204ENST00000473602 SNURFQ9Y675 71 aa6.04□□□□□ -1.44
SHROOM3-204ENST00000473602 CYSTM1Q9H1C7 97 aa6.02□□□□□ -1.45
SHROOM3-204ENST00000473602 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
SHROOM3-204ENST00000473602 LCA10Q71F78 164 aa6□□□□□ -1.45
SHROOM3-204ENST00000473602 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
SHROOM3-204ENST00000473602 V9GYY9 64 aa6□□□□□ -1.45
SHROOM3-204ENST00000473602 H0Y9P7 68 aa5.98□□□□□ -1.45
SHROOM3-204ENST00000473602 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
SHROOM3-204ENST00000473602 KRTAP20-1Q3LI63 56 aa5.93□□□□□ -1.46
SHROOM3-204ENST00000473602 MDN1Q9NU22 5596 aa5.89□□□□□ -1.47
SHROOM3-204ENST00000473602 A8MUN3 132 aa5.89□□□□□ -1.47
SHROOM3-204ENST00000473602 LINC00208Q96KT6 92 aa5.89□□□□□ -1.47
SHROOM3-204ENST00000473602 Q1T7F1 81 aa5.88□□□□□ -1.47
SHROOM3-204ENST00000473602 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
SHROOM3-204ENST00000473602 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
SHROOM3-204ENST00000473602 KMT2DO14686 5537 aa5.83□□□□□ -1.48
SHROOM3-204ENST00000473602 A6NN06 94 aa5.82□□□□□ -1.48
SHROOM3-204ENST00000473602 H0YAA0 97 aa5.81□□□□□ -1.48
SHROOM3-204ENST00000473602 Q5VV11 94 aa5.81□□□□□ -1.48
SHROOM3-204ENST00000473602 CRIPTQ9P021 101 aa5.81□□□□□ -1.48
SHROOM3-204ENST00000473602 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
SHROOM3-204ENST00000473602 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
SHROOM3-204ENST00000473602 MT1BP07438 61 aa5.78□□□□□ -1.48
SHROOM3-204ENST00000473602 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
SHROOM3-204ENST00000473602 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
SHROOM3-204ENST00000473602 ACYP2P14621 99 aa5.71□□□□□ -1.5
SHROOM3-204ENST00000473602 BRK1Q8WUW1 75 aa5.7□□□□□ -1.5
SHROOM3-204ENST00000473602 ADM2Q7Z4H4 148 aa5.69□□□□□ -1.5
SHROOM3-204ENST00000473602 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
SHROOM3-204ENST00000473602 COA5Q86WW8 74 aa5.68□□□□□ -1.5
SHROOM3-204ENST00000473602 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
SHROOM3-204ENST00000473602 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
SHROOM3-204ENST00000473602 PRR15LQ9BU68 103 aa5.64□□□□□ -1.51
SHROOM3-204ENST00000473602 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
SHROOM3-204ENST00000473602 CHKB-CPT1BH3BT56 60 aa5.6□□□□□ -1.51
SHROOM3-204ENST00000473602 PSPHP1O15172 72 aa5.59□□□□□ -1.51
SHROOM3-204ENST00000473602 SPTSSBQ8NFR3 76 aa5.57□□□□□ -1.52
SHROOM3-204ENST00000473602 R4GN34 69 aa5.57□□□□□ -1.52
SHROOM3-204ENST00000473602 P0C880 135 aa5.56□□□□□ -1.52
SHROOM3-204ENST00000473602 A6NED7 52 aa5.54□□□□□ -1.52
SHROOM3-204ENST00000473602 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
SHROOM3-204ENST00000473602 M0QZ58 72 aa5.51□□□□□ -1.53
SHROOM3-204ENST00000473602 SPRR2EP22531 72 aa5.5□□□□□ -1.53
SHROOM3-204ENST00000473602 SPRR2BP35325 72 aa5.5□□□□□ -1.53
SHROOM3-204ENST00000473602 SPRR2AP35326 72 aa5.5□□□□□ -1.53
SHROOM3-204ENST00000473602 PLAC4Q8WY50 150 aa5.5□□□□□ -1.53
SHROOM3-204ENST00000473602 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
SHROOM3-204ENST00000473602 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
SHROOM3-204ENST00000473602 SEC61GP60059 68 aa5.47□□□□□ -1.53
SHROOM3-204ENST00000473602 PMAIP1Q13794 54 aa5.47□□□□□ -1.53
SHROOM3-204ENST00000473602 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
SHROOM3-204ENST00000473602 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
SHROOM3-204ENST00000473602 A0A1B0GU69 56 aa5.46□□□□□ -1.54
SHROOM3-204ENST00000473602 MT1XP80297 61 aa5.43□□□□□ -1.54
SHROOM3-204ENST00000473602 UQCR11O14957 56 aa5.42□□□□□ -1.54
SHROOM3-204ENST00000473602 LINC01554Q52M75 96 aa5.4□□□□□ -1.54
SHROOM3-204ENST00000473602 GPR98Q8WXG9 6306 aa5.39□□□□□ -1.55
SHROOM3-204ENST00000473602 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms