RNA–Protein interactions for RNA: ENST00000473104.5

SH3YL1-219, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 1 (best)

Gene SH3YL1, Length 2,463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-219ENST00000473104 CIRBP-AS1Q8TBR5 109 aa5.27□□□□□ -1.57
SH3YL1-219ENST00000473104 RYR3Q15413 4870 aa5.25□□□□□ -1.57
SH3YL1-219ENST00000473104 ANAPC11Q9NYG5 84 aa5.24□□□□□ -1.57
SH3YL1-219ENST00000473104 DYNC1H1Q14204 4646 aaKnown RBP5.24□□□□□ -1.57
SH3YL1-219ENST00000473104 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
SH3YL1-219ENST00000473104 Q8N1X5 172 aa5.23□□□□□ -1.57
SH3YL1-219ENST00000473104 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
SH3YL1-219ENST00000473104 VPS13BQ7Z7G8 4022 aa5.18□□□□□ -1.58
SH3YL1-219ENST00000473104 APOBP04114 4563 aaKnown RBP5.18□□□□□ -1.58
SH3YL1-219ENST00000473104 COX6B2Q6YFQ2 88 aa5.14□□□□□ -1.59
SH3YL1-219ENST00000473104 SMR3BP02814 79 aaPredicted RBP5.14□□□□□ -1.59
SH3YL1-219ENST00000473104 FAT1Q14517 4588 aa5.13□□□□□ -1.59
SH3YL1-219ENST00000473104 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
SH3YL1-219ENST00000473104 HSPG2P98160 4391 aa5.07□□□□□ -1.6
SH3YL1-219ENST00000473104 EPPK1P58107 5090 aaKnown RBP5.07□□□□□ -1.6
SH3YL1-219ENST00000473104 KRTAP10-4P60372 401 aaPredicted RBP5.06□□□□□ -1.6
SH3YL1-219ENST00000473104 KRTAP1-4P0C5Y4 121 aa5.04□□□□□ -1.6
SH3YL1-219ENST00000473104 KRTAP3-1Q9BYR8 98 aa5.02□□□□□ -1.61
SH3YL1-219ENST00000473104 RYR1P21817 5038 aa5.02□□□□□ -1.61
SH3YL1-219ENST00000473104 A0A0D9SG42 100 aa5.01□□□□□ -1.61
SH3YL1-219ENST00000473104 KIAA1109Q2LD37 5005 aa5.01□□□□□ -1.61
SH3YL1-219ENST00000473104 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
SH3YL1-219ENST00000473104 KRTAP13-2Q52LG2 175 aa5□□□□□ -1.61
SH3YL1-219ENST00000473104 Q5VSD8 79 aa5□□□□□ -1.61
SH3YL1-219ENST00000473104 KRTAP13-4Q3LI77 160 aa4.99□□□□□ -1.61
SH3YL1-219ENST00000473104 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.62
SH3YL1-219ENST00000473104 LRP1Q07954 4544 aaKnown RBP4.94□□□□□ -1.62
SH3YL1-219ENST00000473104 DMBT1Q9UGM3 2413 aaPredicted RBP4.93□□□□□ -1.62
SH3YL1-219ENST00000473104 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
SH3YL1-219ENST00000473104 S4R3F8 94 aa4.91□□□□□ -1.62
SH3YL1-219ENST00000473104 XP32Q5T750 250 aa4.9□□□□□ -1.63
SH3YL1-219ENST00000473104 TNXBP22105 4242 aa4.88□□□□□ -1.63
SH3YL1-219ENST00000473104 FAT3Q8TDW7 4589 aa4.88□□□□□ -1.63
SH3YL1-219ENST00000473104 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
SH3YL1-219ENST00000473104 KRTAP4-5Q9BYR2 181 aa4.87□□□□□ -1.63
SH3YL1-219ENST00000473104 MYCBP2O75592 4640 aa4.87□□□□□ -1.63
SH3YL1-219ENST00000473104 KRTAP10-8P60410 259 aa4.86□□□□□ -1.63
SH3YL1-219ENST00000473104 PLAC4Q8WY50 150 aa4.86□□□□□ -1.63
SH3YL1-219ENST00000473104 BIRC6Q9NR09 4857 aa4.85□□□□□ -1.63
SH3YL1-219ENST00000473104 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
SH3YL1-219ENST00000473104 MT1HL1P0DM35 61 aa4.81□□□□□ -1.64
SH3YL1-219ENST00000473104 HERC2O95714 4834 aa4.79□□□□□ -1.64
SH3YL1-219ENST00000473104 KRTAP12-1P59990 96 aa4.78□□□□□ -1.64
SH3YL1-219ENST00000473104 ABCA13Q86UQ4 5058 aa4.76□□□□□ -1.65
SH3YL1-219ENST00000473104 CAMK2N1Q7Z7J9 78 aa4.73□□□□□ -1.65
SH3YL1-219ENST00000473104 C9orf92A6NGG3 77 aa4.69□□□□□ -1.66
SH3YL1-219ENST00000473104 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
SH3YL1-219ENST00000473104 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
SH3YL1-219ENST00000473104 LPAP08519 4548 aa4.59□□□□□ -1.67
SH3YL1-219ENST00000473104 LRP2P98164 4655 aa4.55□□□□□ -1.68
SH3YL1-219ENST00000473104 HERC1Q15751 4861 aa4.54□□□□□ -1.68
SH3YL1-219ENST00000473104 M0QZ58 72 aa4.52□□□□□ -1.69
SH3YL1-219ENST00000473104 HMCN2Q8NDA2 5059 aa4.44□□□□□ -1.7
SH3YL1-219ENST00000473104 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
SH3YL1-219ENST00000473104 R4GN34 69 aa4.43□□□□□ -1.7
SH3YL1-219ENST00000473104 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
SH3YL1-219ENST00000473104 MUC17Q685J3 4493 aa4.39□□□□□ -1.71
SH3YL1-219ENST00000473104 INE1O15225 51 aa4.37□□□□□ -1.71
SH3YL1-219ENST00000473104 KRTAP4-1Q9BYQ7 146 aa4.35□□□□□ -1.71
SH3YL1-219ENST00000473104 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.72
SH3YL1-219ENST00000473104 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.72
SH3YL1-219ENST00000473104 MUC2Q02817 5179 aa4.32□□□□□ -1.72
SH3YL1-219ENST00000473104 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
SH3YL1-219ENST00000473104 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
SH3YL1-219ENST00000473104 RNF213Q63HN8 5207 aa4.2□□□□□ -1.74
SH3YL1-219ENST00000473104 FLGP20930 4061 aaPredicted RBP4.16□□□□□ -1.74
SH3YL1-219ENST00000473104 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
SH3YL1-219ENST00000473104 TNP1P09430 55 aa4.07□□□□□ -1.76
SH3YL1-219ENST00000473104 MT1HP80294 61 aa4.05□□□□□ -1.76
SH3YL1-219ENST00000473104 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
SH3YL1-219ENST00000473104 M0R2T5 61 aa4□□□□□ -1.77
SH3YL1-219ENST00000473104 KRTAP9-4Q9BYQ2 154 aa3.99□□□□□ -1.77
SH3YL1-219ENST00000473104 KRTAP9-8Q9BYQ0 159 aa3.9□□□□□ -1.78
SH3YL1-219ENST00000473104 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
SH3YL1-219ENST00000473104 MT2AP02795 61 aa3.88□□□□□ -1.79
SH3YL1-219ENST00000473104 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
SH3YL1-219ENST00000473104 MT1FP04733 61 aa3.86□□□□□ -1.79
SH3YL1-219ENST00000473104 KRTAP10-10P60014 251 aa3.84□□□□□ -1.79
SH3YL1-219ENST00000473104 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
SH3YL1-219ENST00000473104 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
SH3YL1-219ENST00000473104 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
SH3YL1-219ENST00000473104 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
SH3YL1-219ENST00000473104 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
SH3YL1-219ENST00000473104 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
SH3YL1-219ENST00000473104 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
SH3YL1-219ENST00000473104 KRTAP10-12P60413 245 aa3.71□□□□□ -1.81
SH3YL1-219ENST00000473104 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
SH3YL1-219ENST00000473104 KRTAP4-8Q9BYQ9 185 aa3.7□□□□□ -1.82
SH3YL1-219ENST00000473104 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
SH3YL1-219ENST00000473104 KRTAP19-8Q3LI54 63 aa3.68□□□□□ -1.82
SH3YL1-219ENST00000473104 MT1BP07438 61 aa3.65□□□□□ -1.83
SH3YL1-219ENST00000473104 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.6□□□□□ -1.83
SH3YL1-219ENST00000473104 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.84
SH3YL1-219ENST00000473104 USH2AO75445 5202 aa3.59□□□□□ -1.84
SH3YL1-219ENST00000473104 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
SH3YL1-219ENST00000473104 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
SH3YL1-219ENST00000473104 KRTAP4-8A0A0G2JLE6 195 aa3.55□□□□□ -1.84
SH3YL1-219ENST00000473104 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
SH3YL1-219ENST00000473104 MT1XP80297 61 aa3.52□□□□□ -1.85
SH3YL1-219ENST00000473104 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms