RNA–Protein interactions for RNA: ENST00000472947.5

NMD3-206, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 1 (best) BASIC

Gene NMD3, Length 2,378 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-206ENST00000472947 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
NMD3-206ENST00000472947 SPINK7P58062 85 aa5.83□□□□□ -1.48
NMD3-206ENST00000472947 LPAP08519 4548 aa5.82□□□□□ -1.48
NMD3-206ENST00000472947 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
NMD3-206ENST00000472947 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
NMD3-206ENST00000472947 LRP2P98164 4655 aa5.79□□□□□ -1.48
NMD3-206ENST00000472947 XP32Q5T750 250 aa5.79□□□□□ -1.48
NMD3-206ENST00000472947 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
NMD3-206ENST00000472947 RPL37P61927 97 aaKnown RBP5.73□□□□□ -1.49
NMD3-206ENST00000472947 LINC01554Q52M75 96 aa5.72□□□□□ -1.49
NMD3-206ENST00000472947 HERC2O95714 4834 aa5.72□□□□□ -1.49
NMD3-206ENST00000472947 PRAC1Q96KF2 57 aa5.7□□□□□ -1.5
NMD3-206ENST00000472947 LCE2AQ5TA79 106 aaPredicted RBP5.69□□□□□ -1.5
NMD3-206ENST00000472947 A0A1B0GU69 56 aa5.67□□□□□ -1.5
NMD3-206ENST00000472947 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.5
NMD3-206ENST00000472947 BIRC6Q9NR09 4857 aa5.64□□□□□ -1.51
NMD3-206ENST00000472947 ADM2Q7Z4H4 148 aa5.63□□□□□ -1.51
NMD3-206ENST00000472947 TPRXLQ17RH7 258 aa5.6□□□□□ -1.51
NMD3-206ENST00000472947 PCLOQ9Y6V0 5065 aa5.56□□□□□ -1.52
NMD3-206ENST00000472947 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
NMD3-206ENST00000472947 HERC1Q15751 4861 aa5.52□□□□□ -1.53
NMD3-206ENST00000472947 UQCR11O14957 56 aa5.5□□□□□ -1.53
NMD3-206ENST00000472947 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
NMD3-206ENST00000472947 S4R3F8 94 aa5.49□□□□□ -1.53
NMD3-206ENST00000472947 MUC2Q02817 5179 aa5.49□□□□□ -1.53
NMD3-206ENST00000472947 KRTAP4-1Q9BYQ7 146 aa5.48□□□□□ -1.53
NMD3-206ENST00000472947 MUC17Q685J3 4493 aa5.48□□□□□ -1.53
NMD3-206ENST00000472947 CSAG1Q6PB30 78 aa5.48□□□□□ -1.53
NMD3-206ENST00000472947 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
NMD3-206ENST00000472947 H0YAA0 97 aa5.45□□□□□ -1.54
NMD3-206ENST00000472947 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
NMD3-206ENST00000472947 A0A1B0GU33 70 aa5.43□□□□□ -1.54
NMD3-206ENST00000472947 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
NMD3-206ENST00000472947 P0C880 135 aa5.39□□□□□ -1.55
NMD3-206ENST00000472947 SEC61BP60468 96 aaKnown RBP5.39□□□□□ -1.55
NMD3-206ENST00000472947 KRTAP13-4Q3LI77 160 aa5.37□□□□□ -1.55
NMD3-206ENST00000472947 HMCN2Q8NDA2 5059 aa5.35□□□□□ -1.55
NMD3-206ENST00000472947 ROMO1P60602 79 aa5.34□□□□□ -1.56
NMD3-206ENST00000472947 A0A0D9SG42 100 aa5.31□□□□□ -1.56
NMD3-206ENST00000472947 KRTAP19-2Q3LHN2 52 aa5.28□□□□□ -1.56
NMD3-206ENST00000472947 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
NMD3-206ENST00000472947 FAT4Q6V0I7 4981 aa5.24□□□□□ -1.57
NMD3-206ENST00000472947 RNF213Q63HN8 5207 aa5.23□□□□□ -1.57
NMD3-206ENST00000472947 UBR4Q5T4S7 5183 aa5.21□□□□□ -1.58
NMD3-206ENST00000472947 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
NMD3-206ENST00000472947 KRTAP12-2P59991 146 aa5.15□□□□□ -1.59
NMD3-206ENST00000472947 CRIPTQ9P021 101 aa5.13□□□□□ -1.59
NMD3-206ENST00000472947 M0QZ58 72 aa5.12□□□□□ -1.59
NMD3-206ENST00000472947 SPINT4Q6UDR6 99 aa5.12□□□□□ -1.59
NMD3-206ENST00000472947 K7ERS5 55 aa5.11□□□□□ -1.59
NMD3-206ENST00000472947 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
NMD3-206ENST00000472947 KRTAP12-1P59990 96 aa5.1□□□□□ -1.59
NMD3-206ENST00000472947 R4GN34 69 aa5.08□□□□□ -1.6
NMD3-206ENST00000472947 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
NMD3-206ENST00000472947 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
NMD3-206ENST00000472947 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
NMD3-206ENST00000472947 M0R2T5 61 aa4.96□□□□□ -1.62
NMD3-206ENST00000472947 MT1HP80294 61 aa4.96□□□□□ -1.62
NMD3-206ENST00000472947 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.62
NMD3-206ENST00000472947 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
NMD3-206ENST00000472947 MT1FP04733 61 aa4.83□□□□□ -1.64
NMD3-206ENST00000472947 MT2AP02795 61 aa4.81□□□□□ -1.64
NMD3-206ENST00000472947 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
NMD3-206ENST00000472947 CAMK2N1Q7Z7J9 78 aa4.8□□□□□ -1.64
NMD3-206ENST00000472947 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
NMD3-206ENST00000472947 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
NMD3-206ENST00000472947 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
NMD3-206ENST00000472947 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
NMD3-206ENST00000472947 PLAC4Q8WY50 150 aa4.64□□□□□ -1.67
NMD3-206ENST00000472947 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
NMD3-206ENST00000472947 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
NMD3-206ENST00000472947 MT1BP07438 61 aa4.59□□□□□ -1.67
NMD3-206ENST00000472947 USH2AO75445 5202 aa4.58□□□□□ -1.68
NMD3-206ENST00000472947 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
NMD3-206ENST00000472947 TNP1P09430 55 aa4.55□□□□□ -1.68
NMD3-206ENST00000472947 KRTAP10-5P60370 271 aa4.49□□□□□ -1.69
NMD3-206ENST00000472947 MT1XP80297 61 aa4.49□□□□□ -1.69
NMD3-206ENST00000472947 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
NMD3-206ENST00000472947 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
NMD3-206ENST00000472947 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
NMD3-206ENST00000472947 KMT2DO14686 5537 aa4.37□□□□□ -1.71
NMD3-206ENST00000472947 FSIP2Q5CZC0 6907 aa4.35□□□□□ -1.71
NMD3-206ENST00000472947 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
NMD3-206ENST00000472947 KRTAP4-8Q9BYQ9 185 aa4.29□□□□□ -1.72
NMD3-206ENST00000472947 PRO2289Q9P1D8 64 aa4.27□□□□□ -1.73
NMD3-206ENST00000472947 SSPOA2VEC9 5147 aa4.25□□□□□ -1.73
NMD3-206ENST00000472947 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
NMD3-206ENST00000472947 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
NMD3-206ENST00000472947 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
NMD3-206ENST00000472947 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
NMD3-206ENST00000472947 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
NMD3-206ENST00000472947 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
NMD3-206ENST00000472947 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
NMD3-206ENST00000472947 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
NMD3-206ENST00000472947 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
NMD3-206ENST00000472947 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
NMD3-206ENST00000472947 KRTAP9-7A8MTY7 169 aa4.04□□□□□ -1.76
NMD3-206ENST00000472947 KRTAP19-6Q3LI70 58 aa4.04□□□□□ -1.76
NMD3-206ENST00000472947 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
NMD3-206ENST00000472947 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms