RNA–Protein interactions for RNA: ENST00000472856.1

SOX2-OT-205, SOX2 overlapping transcript, humanhuman

TSL 2

Gene SOX2-OT, Length 454 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-205ENST00000472856 DNAH11Q96DT5 4516 aa0.18□□□□□ -2.38
SOX2-OT-205ENST00000472856 MYO18BQ8IUG5 2567 aa0.17□□□□□ -2.38
SOX2-OT-205ENST00000472856 SAMD9LQ8IVG5 1584 aa0.16□□□□□ -2.38
SOX2-OT-205ENST00000472856 PCLOQ9Y6V0 5065 aa0.15□□□□□ -2.39
SOX2-OT-205ENST00000472856 SPRR2FQ96RM1 72 aa0.14□□□□□ -2.39
SOX2-OT-205ENST00000472856 COL12A1Q99715 3063 aa0.13□□□□□ -2.39
SOX2-OT-205ENST00000472856 UBR4Q5T4S7 5183 aa0.13□□□□□ -2.39
SOX2-OT-205ENST00000472856 MUC2Q02817 5179 aa0.13□□□□□ -2.39
SOX2-OT-205ENST00000472856 WDR87Q6ZQQ6 2873 aa0.12□□□□□ -2.39
SOX2-OT-205ENST00000472856 CCDC168Q8NDH2 2452 aa0.12□□□□□ -2.39
SOX2-OT-205ENST00000472856 RYR1P21817 5038 aa0.12□□□□□ -2.39
SOX2-OT-205ENST00000472856 SSPOA2VEC9 5147 aa0.11□□□□□ -2.39
SOX2-OT-205ENST00000472856 POLR2KP53803 58 aaKnown RBP0.11□□□□□ -2.39
SOX2-OT-205ENST00000472856 DNAH6Q9C0G6 4158 aa0.1□□□□□ -2.39
SOX2-OT-205ENST00000472856 MXRA5Q9NR99 2828 aa0.1□□□□□ -2.39
SOX2-OT-205ENST00000472856 KIAA1109Q2LD37 5005 aa0.1□□□□□ -2.39
SOX2-OT-205ENST00000472856 KMT2CQ8NEZ4 4911 aaKnown RBP0.1□□□□□ -2.39
SOX2-OT-205ENST00000472856 DYNC2H1Q8NCM8 4307 aaKnown RBP0.09□□□□□ -2.39
SOX2-OT-205ENST00000472856 HYDINQ4G0P3 5121 aa0.09□□□□□ -2.4
SOX2-OT-205ENST00000472856 RYR3Q15413 4870 aa0.08□□□□□ -2.4
SOX2-OT-205ENST00000472856 NBPF19A0A087WUL8 3843 aa0.08□□□□□ -2.4
SOX2-OT-205ENST00000472856 LAMA5O15230 3695 aa0.08□□□□□ -2.4
SOX2-OT-205ENST00000472856 RYR2Q92736 4967 aa0.08□□□□□ -2.4
SOX2-OT-205ENST00000472856 RNF213Q63HN8 5207 aa0.08□□□□□ -2.4
SOX2-OT-205ENST00000472856 TRIOO75962 3097 aa0.07□□□□□ -2.4
SOX2-OT-205ENST00000472856 HERC1Q15751 4861 aa0.07□□□□□ -2.4
SOX2-OT-205ENST00000472856 EPPK1P58107 5090 aaKnown RBP0.07□□□□□ -2.4
SOX2-OT-205ENST00000472856 ABCA13Q86UQ4 5058 aa0.06□□□□□ -2.4
SOX2-OT-205ENST00000472856 CLPSL2Q6UWE3 100 aa0.05□□□□□ -2.4
SOX2-OT-205ENST00000472856 MUC12Q9UKN1 5478 aa0.05□□□□□ -2.4
SOX2-OT-205ENST00000472856 DNHD1Q96M86 4753 aa0.04□□□□□ -2.4
SOX2-OT-205ENST00000472856 VPS13DQ5THJ4 4388 aa0.04□□□□□ -2.4
SOX2-OT-205ENST00000472856 HERC2O95714 4834 aa0.04□□□□□ -2.4
SOX2-OT-205ENST00000472856 BIRC6Q9NR09 4857 aa0.03□□□□□ -2.4
SOX2-OT-205ENST00000472856 LAMA1P25391 3075 aa0.03□□□□□ -2.4
SOX2-OT-205ENST00000472856 MGAM2Q2M2H8 2515 aa0.03□□□□□ -2.4
SOX2-OT-205ENST00000472856 FRYQ5TBA9 3013 aa0.03□□□□□ -2.4
SOX2-OT-205ENST00000472856 TLN2Q9Y4G6 2542 aa0.02□□□□□ -2.41
SOX2-OT-205ENST00000472856 USH2AO75445 5202 aa0.02□□□□□ -2.41
SOX2-OT-205ENST00000472856 CELSR3Q9NYQ7 3312 aa0.02□□□□□ -2.41
SOX2-OT-205ENST00000472856 STARD9Q9P2P6 4700 aa0.01□□□□□ -2.41
SOX2-OT-205ENST00000472856 ZFHX4Q86UP3 3567 aa0.01□□□□□ -2.41
SOX2-OT-205ENST00000472856 KRTAP20-1Q3LI63 56 aa0□□□□□ -2.41
SOX2-OT-205ENST00000472856 DNAH7Q8WXX0 4024 aa-0□□□□□ -2.41
SOX2-OT-205ENST00000472856 LAMA3Q16787 3333 aa-0.02□□□□□ -2.41
SOX2-OT-205ENST00000472856 LAMA2P24043 3122 aaKnown RBP-0.02□□□□□ -2.41
SOX2-OT-205ENST00000472856 CSMD1Q96PZ7 3565 aa-0.02□□□□□ -2.41
SOX2-OT-205ENST00000472856 FAT1Q14517 4588 aa-0.03□□□□□ -2.41
SOX2-OT-205ENST00000472856 SPTBN5Q9NRC6 3674 aaKnown RBP-0.03□□□□□ -2.41
SOX2-OT-205ENST00000472856 DYNC1H1Q14204 4646 aaKnown RBP-0.03□□□□□ -2.41
SOX2-OT-205ENST00000472856 DNAH1Q9P2D7 4330 aa-0.03□□□□□ -2.41
SOX2-OT-205ENST00000472856 DNAH5Q8TE73 4624 aa-0.04□□□□□ -2.42
SOX2-OT-205ENST00000472856 PLECQ15149 4684 aaKnown RBP-0.04□□□□□ -2.42
SOX2-OT-205ENST00000472856 EYSQ5T1H1 3165 aa-0.04□□□□□ -2.42
SOX2-OT-205ENST00000472856 SRCAPQ6ZRS2 3230 aa-0.05□□□□□ -2.42
SOX2-OT-205ENST00000472856 SPART-AS1P0CW21 52 aa-0.05□□□□□ -2.42
SOX2-OT-205ENST00000472856 KRTAP8-1Q8IUC2 63 aa-0.05□□□□□ -2.42
SOX2-OT-205ENST00000472856 VPS13CQ709C8 3753 aa-0.05□□□□□ -2.42
SOX2-OT-205ENST00000472856 MUC17Q685J3 4493 aa-0.05□□□□□ -2.42
SOX2-OT-205ENST00000472856 USP9XQ93008 2570 aaPredicted RBP-0.05□□□□□ -2.42
SOX2-OT-205ENST00000472856 RELNP78509 3460 aa-0.06□□□□□ -2.42
SOX2-OT-205ENST00000472856 CMYA5Q8N3K9 4069 aa-0.06□□□□□ -2.42
SOX2-OT-205ENST00000472856 MUC3AQ02505 3323 aa-0.06□□□□□ -2.42
SOX2-OT-205ENST00000472856 TRRAPQ9Y4A5 3859 aa-0.07□□□□□ -2.42
SOX2-OT-205ENST00000472856 MT4P47944 62 aa-0.07□□□□□ -2.42
SOX2-OT-205ENST00000472856 KRTAP19-6Q3LI70 58 aa-0.07□□□□□ -2.42
SOX2-OT-205ENST00000472856 MYO15AQ9UKN7 3530 aa-0.07□□□□□ -2.42
SOX2-OT-205ENST00000472856 USP9YO00507 2555 aaPredicted RBP-0.07□□□□□ -2.42
SOX2-OT-205ENST00000472856 DNAH10Q8IVF4 4471 aa-0.08□□□□□ -2.42
SOX2-OT-205ENST00000472856 UNC80Q8N2C7 3258 aa-0.08□□□□□ -2.42
SOX2-OT-205ENST00000472856 BOD1L1Q8NFC6 3051 aa-0.08□□□□□ -2.42
SOX2-OT-205ENST00000472856 KRTAP20-2Q3LI61 65 aa-0.08□□□□□ -2.42
SOX2-OT-205ENST00000472856 EP400Q96L91 3159 aa-0.08□□□□□ -2.42
SOX2-OT-205ENST00000472856 CSMD2Q7Z408 3487 aa-0.08□□□□□ -2.42
SOX2-OT-205ENST00000472856 DNAH8Q96JB1 4490 aa-0.08□□□□□ -2.42
SOX2-OT-205ENST00000472856 SMG1Q96Q15 3661 aaKnown RBP-0.08□□□□□ -2.42
SOX2-OT-205ENST00000472856 MGAQ8IWI9 3026 aa-0.08□□□□□ -2.42
SOX2-OT-205ENST00000472856 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
SOX2-OT-205ENST00000472856 KRTAP19-5Q3LI72 72 aa-0.09□□□□□ -2.42
SOX2-OT-205ENST00000472856 KRTAP19-7Q3SYF9 63 aa-0.09□□□□□ -2.42
SOX2-OT-205ENST00000472856 VCANP13611 3396 aa-0.09□□□□□ -2.42
SOX2-OT-205ENST00000472856 DNAH17Q9UFH2 4485 aa-0.09□□□□□ -2.42
SOX2-OT-205ENST00000472856 WDFY4Q6ZS81 3184 aa-0.1□□□□□ -2.42
SOX2-OT-205ENST00000472856 ITPR1Q14643 2758 aa-0.1□□□□□ -2.43
SOX2-OT-205ENST00000472856 DNAH14Q0VDD8 3507 aa-0.1□□□□□ -2.43
SOX2-OT-205ENST00000472856 USP34Q70CQ2 3546 aa-0.1□□□□□ -2.43
SOX2-OT-205ENST00000472856 WDFY3Q8IZQ1 3526 aa-0.1□□□□□ -2.43
SOX2-OT-205ENST00000472856 UTRNP46939 3433 aa-0.1□□□□□ -2.43
SOX2-OT-205ENST00000472856 SZT2Q5T011 3432 aa-0.1□□□□□ -2.43
SOX2-OT-205ENST00000472856 MKI67P46013 3256 aaKnown RBP-0.11□□□□□ -2.43
SOX2-OT-205ENST00000472856 DCHS1Q96JQ0 3298 aa-0.11□□□□□ -2.43
SOX2-OT-205ENST00000472856 PCNTO95613 3336 aa-0.11□□□□□ -2.43
SOX2-OT-205ENST00000472856 CHD7Q9P2D1 2997 aa-0.11□□□□□ -2.43
SOX2-OT-205ENST00000472856 BRCA2P51587 3418 aa-0.11□□□□□ -2.43
SOX2-OT-205ENST00000472856 SPEGQ15772 3267 aa-0.11□□□□□ -2.43
SOX2-OT-205ENST00000472856 DMDP11532 3685 aa-0.12□□□□□ -2.43
SOX2-OT-205ENST00000472856 C5orf42Q9H799 3197 aa-0.12□□□□□ -2.43
SOX2-OT-205ENST00000472856 CRYBG3Q68DQ2 2970 aa-0.12□□□□□ -2.43
SOX2-OT-205ENST00000472856 ASPMQ8IZT6 3477 aa-0.12□□□□□ -2.43
SOX2-OT-205ENST00000472856 DMXL2Q8TDJ6 3036 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms