RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 MT3P25713 68 aa4.63□□□□□ -1.67
SMC4-213ENST00000472282 SPINK7P58062 85 aa4.63□□□□□ -1.67
SMC4-213ENST00000472282 Q5W150 140 aa4.63□□□□□ -1.67
SMC4-213ENST00000472282 MPLKIPQ8TAP9 179 aa4.63□□□□□ -1.67
SMC4-213ENST00000472282 A0A087WVE0 104 aa4.61□□□□□ -1.67
SMC4-213ENST00000472282 FAM236DA0A1B0GTK5 79 aa4.6□□□□□ -1.67
SMC4-213ENST00000472282 K7ERU9 68 aa4.6□□□□□ -1.67
SMC4-213ENST00000472282 FAM236CP0DP71 79 aa4.6□□□□□ -1.67
SMC4-213ENST00000472282 TP53AIP1Q9HCN2 124 aa4.59□□□□□ -1.67
SMC4-213ENST00000472282 RBM12B-AS1Q9P1G2 102 aa4.59□□□□□ -1.67
SMC4-213ENST00000472282 C7orf65Q6ZTY9 151 aa4.58□□□□□ -1.68
SMC4-213ENST00000472282 TRAV22A0A0B4J277 110 aa4.53□□□□□ -1.68
SMC4-213ENST00000472282 MT-ATP8P03928 68 aa4.52□□□□□ -1.69
SMC4-213ENST00000472282 UQCRQO14949 82 aa4.51□□□□□ -1.69
SMC4-213ENST00000472282 MT2AP02795 61 aa4.51□□□□□ -1.69
SMC4-213ENST00000472282 H0Y9P7 68 aa4.5□□□□□ -1.69
SMC4-213ENST00000472282 C4orf26Q17RF5 130 aa4.49□□□□□ -1.69
SMC4-213ENST00000472282 OCR1Q9BZK8 76 aa4.49□□□□□ -1.69
SMC4-213ENST00000472282 IMUPQ9GZP8 106 aa4.49□□□□□ -1.69
SMC4-213ENST00000472282 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
SMC4-213ENST00000472282 USH2AO75445 5202 aa4.48□□□□□ -1.69
SMC4-213ENST00000472282 MT1FP04733 61 aa4.48□□□□□ -1.69
SMC4-213ENST00000472282 LOC101927531A0A1B0GV80 90 aa4.47□□□□□ -1.69
SMC4-213ENST00000472282 ATOX1O00244 68 aa4.46□□□□□ -1.7
SMC4-213ENST00000472282 SCGB1A1P11684 91 aa4.46□□□□□ -1.7
SMC4-213ENST00000472282 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.7
SMC4-213ENST00000472282 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
SMC4-213ENST00000472282 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
SMC4-213ENST00000472282 H1FX-AS1Q4G0G2 97 aa4.45□□□□□ -1.7
SMC4-213ENST00000472282 MP68P56378 58 aa4.43□□□□□ -1.7
SMC4-213ENST00000472282 C1orf64Q8NEQ6 169 aa4.43□□□□□ -1.7
SMC4-213ENST00000472282 LINC00208Q96KT6 92 aa4.43□□□□□ -1.7
SMC4-213ENST00000472282 C5orf47Q569G3 176 aa4.42□□□□□ -1.7
SMC4-213ENST00000472282 KRTAP10-10P60014 251 aa4.4□□□□□ -1.71
SMC4-213ENST00000472282 TRAV7A0A075B6U4 112 aa4.38□□□□□ -1.71
SMC4-213ENST00000472282 H3BPC8 53 aa4.38□□□□□ -1.71
SMC4-213ENST00000472282 KLKP1Q107X0 134 aa4.38□□□□□ -1.71
SMC4-213ENST00000472282 SMIM20Q8N5G0 67 aa4.38□□□□□ -1.71
SMC4-213ENST00000472282 S4R3F8 94 aa4.36□□□□□ -1.71
SMC4-213ENST00000472282 PCP4P48539 62 aa4.34□□□□□ -1.71
SMC4-213ENST00000472282 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.72
SMC4-213ENST00000472282 LCA10Q71F78 164 aa4.33□□□□□ -1.72
SMC4-213ENST00000472282 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
SMC4-213ENST00000472282 A8MUN3 132 aa4.3□□□□□ -1.72
SMC4-213ENST00000472282 SERP2Q8N6R1 65 aa4.3□□□□□ -1.72
SMC4-213ENST00000472282 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
SMC4-213ENST00000472282 CSAG1Q6PB30 78 aa4.28□□□□□ -1.72
SMC4-213ENST00000472282 SNURFQ9Y675 71 aa4.28□□□□□ -1.72
SMC4-213ENST00000472282 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
SMC4-213ENST00000472282 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
SMC4-213ENST00000472282 C20orf197Q8N268 126 aa4.27□□□□□ -1.73
SMC4-213ENST00000472282 DMAC1Q96GE9 116 aa4.26□□□□□ -1.73
SMC4-213ENST00000472282 NDUFC1O43677 76 aa4.23□□□□□ -1.73
SMC4-213ENST00000472282 COX7CP15954 63 aa4.22□□□□□ -1.73
SMC4-213ENST00000472282 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
SMC4-213ENST00000472282 ACYP2P14621 99 aa4.18□□□□□ -1.74
SMC4-213ENST00000472282 SPANXA2-OT1Q8N9U9 137 aa4.18□□□□□ -1.74
SMC4-213ENST00000472282 ANAPC13Q9BS18 74 aa4.18□□□□□ -1.74
SMC4-213ENST00000472282 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
SMC4-213ENST00000472282 CYSTM1Q9H1C7 97 aa4.15□□□□□ -1.75
SMC4-213ENST00000472282 H0YAA0 97 aa4.13□□□□□ -1.75
SMC4-213ENST00000472282 CHKB-CPT1BH3BT56 60 aa4.12□□□□□ -1.75
SMC4-213ENST00000472282 H7BZZ5 65 aa4.12□□□□□ -1.75
SMC4-213ENST00000472282 ADM2Q7Z4H4 148 aa4.12□□□□□ -1.75
SMC4-213ENST00000472282 NEBP20929 6669 aa4.1□□□□□ -1.75
SMC4-213ENST00000472282 CCDC179H3BU77 68 aa4.1□□□□□ -1.75
SMC4-213ENST00000472282 MT1BP07438 61 aa4.1□□□□□ -1.75
SMC4-213ENST00000472282 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
SMC4-213ENST00000472282 SPTSSBQ8NFR3 76 aa4.09□□□□□ -1.75
SMC4-213ENST00000472282 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
SMC4-213ENST00000472282 COA5Q86WW8 74 aa4.07□□□□□ -1.76
SMC4-213ENST00000472282 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
SMC4-213ENST00000472282 CRIPTQ9P021 101 aa4.07□□□□□ -1.76
SMC4-213ENST00000472282 P0C880 135 aa4.06□□□□□ -1.76
SMC4-213ENST00000472282 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
SMC4-213ENST00000472282 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
SMC4-213ENST00000472282 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
SMC4-213ENST00000472282 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
SMC4-213ENST00000472282 A6NN06 94 aa4.02□□□□□ -1.77
SMC4-213ENST00000472282 Q5VV11 94 aa4.02□□□□□ -1.77
SMC4-213ENST00000472282 R4GN34 69 aa4□□□□□ -1.77
SMC4-213ENST00000472282 M0QZ58 72 aa3.98□□□□□ -1.77
SMC4-213ENST00000472282 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
SMC4-213ENST00000472282 MUC12Q9UKN1 5478 aa3.97□□□□□ -1.77
SMC4-213ENST00000472282 TMEM258P61165 79 aa3.94□□□□□ -1.78
SMC4-213ENST00000472282 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
SMC4-213ENST00000472282 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
SMC4-213ENST00000472282 SEC61GP60059 68 aa3.9□□□□□ -1.79
SMC4-213ENST00000472282 SERP1Q9Y6X1 66 aa3.89□□□□□ -1.79
SMC4-213ENST00000472282 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
SMC4-213ENST00000472282 PLAC4Q8WY50 150 aa3.87□□□□□ -1.79
SMC4-213ENST00000472282 A0A1B0GU69 56 aa3.84□□□□□ -1.79
SMC4-213ENST00000472282 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
SMC4-213ENST00000472282 A0A1B0GU33 70 aa3.82□□□□□ -1.8
SMC4-213ENST00000472282 MT1XP80297 61 aa3.81□□□□□ -1.8
SMC4-213ENST00000472282 SPATA8Q6RVD6 105 aa3.81□□□□□ -1.8
SMC4-213ENST00000472282 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
SMC4-213ENST00000472282 LINC01558Q9Y6Z2 57 aa3.79□□□□□ -1.8
SMC4-213ENST00000472282 MDN1Q9NU22 5596 aa3.79□□□□□ -1.8
SMC4-213ENST00000472282 KMT2DO14686 5537 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms