RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 ACYP1P07311 99 aa3.46□□□□□ -1.86
SCN9A-206ENST00000472119 FAM240AA0A1B0GVK7 77 aa3.45□□□□□ -1.86
SCN9A-206ENST00000472119 NDUFS5O43920 106 aa3.45□□□□□ -1.86
SCN9A-206ENST00000472119 KRTAP19-2Q3LHN2 52 aa3.45□□□□□ -1.86
SCN9A-206ENST00000472119 CASC2Q6XLA1 102 aa3.45□□□□□ -1.86
SCN9A-206ENST00000472119 ZCCHC13Q8WW36 166 aaKnown RBP3.45□□□□□ -1.86
SCN9A-206ENST00000472119 CXCL6P80162 114 aa3.44□□□□□ -1.86
SCN9A-206ENST00000472119 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
SCN9A-206ENST00000472119 HCG22E2RYF7 251 aa3.43□□□□□ -1.86
SCN9A-206ENST00000472119 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
SCN9A-206ENST00000472119 SPINK7P58062 85 aa3.41□□□□□ -1.86
SCN9A-206ENST00000472119 COX6B2Q6YFQ2 88 aa3.41□□□□□ -1.86
SCN9A-206ENST00000472119 J3QR89 54 aa3.4□□□□□ -1.87
SCN9A-206ENST00000472119 HIST1H4AP62805 103 aaKnown RBP3.4□□□□□ -1.87
SCN9A-206ENST00000472119 ATP5EP2Q5VTU8 51 aa3.4□□□□□ -1.87
SCN9A-206ENST00000472119 Q5W150 140 aa3.4□□□□□ -1.87
SCN9A-206ENST00000472119 LINC00643Q86TS7 51 aa3.4□□□□□ -1.87
SCN9A-206ENST00000472119 HRES1P13985 223 aa3.39□□□□□ -1.87
SCN9A-206ENST00000472119 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
SCN9A-206ENST00000472119 MT1HP80294 61 aa3.38□□□□□ -1.87
SCN9A-206ENST00000472119 A0A087WVE0 104 aa3.37□□□□□ -1.87
SCN9A-206ENST00000472119 FAM236DA0A1B0GTK5 79 aa3.36□□□□□ -1.87
SCN9A-206ENST00000472119 FAM236CP0DP71 79 aa3.36□□□□□ -1.87
SCN9A-206ENST00000472119 RBM12B-AS1Q9P1G2 102 aa3.36□□□□□ -1.87
SCN9A-206ENST00000472119 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.87
SCN9A-206ENST00000472119 K7ERU9 68 aa3.34□□□□□ -1.87
SCN9A-206ENST00000472119 M0R2T5 61 aa3.34□□□□□ -1.87
SCN9A-206ENST00000472119 TP53AIP1Q9HCN2 124 aa3.34□□□□□ -1.87
SCN9A-206ENST00000472119 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
SCN9A-206ENST00000472119 C7orf65Q6ZTY9 151 aa3.33□□□□□ -1.88
SCN9A-206ENST00000472119 MT-ATP8P03928 68 aa3.31□□□□□ -1.88
SCN9A-206ENST00000472119 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
SCN9A-206ENST00000472119 UQCRQO14949 82 aa3.3□□□□□ -1.88
SCN9A-206ENST00000472119 C4orf26Q17RF5 130 aa3.3□□□□□ -1.88
SCN9A-206ENST00000472119 TRAV22A0A0B4J277 110 aa3.29□□□□□ -1.88
SCN9A-206ENST00000472119 H0Y9P7 68 aa3.28□□□□□ -1.88
SCN9A-206ENST00000472119 OCR1Q9BZK8 76 aa3.28□□□□□ -1.88
SCN9A-206ENST00000472119 CYP4F30PQ9H0H9 118 aa3.28□□□□□ -1.88
SCN9A-206ENST00000472119 SCGB1A1P11684 91 aa3.27□□□□□ -1.89
SCN9A-206ENST00000472119 H1FX-AS1Q4G0G2 97 aa3.26□□□□□ -1.89
SCN9A-206ENST00000472119 IMUPQ9GZP8 106 aa3.26□□□□□ -1.89
SCN9A-206ENST00000472119 LOC101927531A0A1B0GV80 90 aa3.25□□□□□ -1.89
SCN9A-206ENST00000472119 ATOX1O00244 68 aa3.25□□□□□ -1.89
SCN9A-206ENST00000472119 C1orf64Q8NEQ6 169 aa3.25□□□□□ -1.89
SCN9A-206ENST00000472119 LINC00208Q96KT6 92 aa3.25□□□□□ -1.89
SCN9A-206ENST00000472119 MP68P56378 58 aa3.24□□□□□ -1.89
SCN9A-206ENST00000472119 C5orf47Q569G3 176 aa3.23□□□□□ -1.89
SCN9A-206ENST00000472119 FAM236AA0A1B0GUQ0 79 aa3.22□□□□□ -1.89
SCN9A-206ENST00000472119 FAM236BA0A1B0GV22 79 aa3.22□□□□□ -1.89
SCN9A-206ENST00000472119 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
SCN9A-206ENST00000472119 KLKP1Q107X0 134 aa3.21□□□□□ -1.9
SCN9A-206ENST00000472119 TRAV7A0A075B6U4 112 aa3.19□□□□□ -1.9
SCN9A-206ENST00000472119 MT2AP02795 61 aa3.19□□□□□ -1.9
SCN9A-206ENST00000472119 S4R3F8 94 aa3.19□□□□□ -1.9
SCN9A-206ENST00000472119 H3BPC8 53 aa3.18□□□□□ -1.9
SCN9A-206ENST00000472119 SMIM20Q8N5G0 67 aa3.18□□□□□ -1.9
SCN9A-206ENST00000472119 MT1FP04733 61 aa3.17□□□□□ -1.9
SCN9A-206ENST00000472119 KRTAP10-10P60014 251 aa3.17□□□□□ -1.9
SCN9A-206ENST00000472119 LCA10Q71F78 164 aa3.17□□□□□ -1.9
SCN9A-206ENST00000472119 CSAG1Q6PB30 78 aa3.15□□□□□ -1.91
SCN9A-206ENST00000472119 SNURFQ9Y675 71 aa3.14□□□□□ -1.91
SCN9A-206ENST00000472119 A8MUN3 132 aa3.13□□□□□ -1.91
SCN9A-206ENST00000472119 SERP2Q8N6R1 65 aa3.13□□□□□ -1.91
SCN9A-206ENST00000472119 C20orf197Q8N268 126 aa3.11□□□□□ -1.91
SCN9A-206ENST00000472119 NDUFC1O43677 76 aa3.1□□□□□ -1.91
SCN9A-206ENST00000472119 DMAC1Q96GE9 116 aa3.1□□□□□ -1.91
SCN9A-206ENST00000472119 COX7CP15954 63 aa3.08□□□□□ -1.92
SCN9A-206ENST00000472119 CRCT1Q9UGL9 99 aa3.07□□□□□ -1.92
SCN9A-206ENST00000472119 ACYP2P14621 99 aa3.06□□□□□ -1.92
SCN9A-206ENST00000472119 ANAPC13Q9BS18 74 aa3.04□□□□□ -1.92
SCN9A-206ENST00000472119 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
SCN9A-206ENST00000472119 CYSTM1Q9H1C7 97 aa3.03□□□□□ -1.92
SCN9A-206ENST00000472119 ADM2Q7Z4H4 148 aa3.02□□□□□ -1.93
SCN9A-206ENST00000472119 H0YAA0 97 aa3.01□□□□□ -1.93
SCN9A-206ENST00000472119 CHKB-CPT1BH3BT56 60 aa3□□□□□ -1.93
SCN9A-206ENST00000472119 CCDC179H3BU77 68 aa3□□□□□ -1.93
SCN9A-206ENST00000472119 H7BZZ5 65 aa3□□□□□ -1.93
SCN9A-206ENST00000472119 USH2AO75445 5202 aa3□□□□□ -1.93
SCN9A-206ENST00000472119 FSIP2Q5CZC0 6907 aa2.99□□□□□ -1.93
SCN9A-206ENST00000472119 P0C880 135 aa2.98□□□□□ -1.93
SCN9A-206ENST00000472119 SPTSSBQ8NFR3 76 aa2.98□□□□□ -1.93
SCN9A-206ENST00000472119 SPRR2GQ9BYE4 73 aa2.98□□□□□ -1.93
SCN9A-206ENST00000472119 CRIPTQ9P021 101 aa2.98□□□□□ -1.93
SCN9A-206ENST00000472119 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
SCN9A-206ENST00000472119 COA5Q86WW8 74 aa2.96□□□□□ -1.94
SCN9A-206ENST00000472119 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
SCN9A-206ENST00000472119 MT1BP07438 61 aa2.94□□□□□ -1.94
SCN9A-206ENST00000472119 Q5VV11 94 aa2.94□□□□□ -1.94
SCN9A-206ENST00000472119 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
SCN9A-206ENST00000472119 KRTAP19-6Q3LI70 58 aa2.93□□□□□ -1.94
SCN9A-206ENST00000472119 M0QZ58 72 aa2.92□□□□□ -1.94
SCN9A-206ENST00000472119 R4GN34 69 aa2.92□□□□□ -1.94
SCN9A-206ENST00000472119 LINC01554Q52M75 96 aa2.88□□□□□ -1.95
SCN9A-206ENST00000472119 ATP5EP56381 51 aaPredicted RBP2.87□□□□□ -1.95
SCN9A-206ENST00000472119 FCGBPQ9Y6R7 5405 aaPredicted RBP2.86□□□□□ -1.95
SCN9A-206ENST00000472119 A6NN06 94 aa2.85□□□□□ -1.95
SCN9A-206ENST00000472119 SEC61GP60059 68 aa2.85□□□□□ -1.95
SCN9A-206ENST00000472119 TMEM258P61165 79 aa2.85□□□□□ -1.95
SCN9A-206ENST00000472119 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
SCN9A-206ENST00000472119 SERP1Q9Y6X1 66 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms