RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 RPL37P61927 97 aaKnown RBP9.82□□□□□ -0.84
COL20A1-205ENST00000471582 COX6B2Q6YFQ2 88 aa9.78□□□□□ -0.84
COL20A1-205ENST00000471582 XP32Q5T750 250 aa9.77□□□□□ -0.85
COL20A1-205ENST00000471582 UQCR11O14957 56 aa9.74□□□□□ -0.85
COL20A1-205ENST00000471582 SPATA8Q6RVD6 105 aa9.72□□□□□ -0.85
COL20A1-205ENST00000471582 A6NN06 94 aa9.68□□□□□ -0.86
COL20A1-205ENST00000471582 J3QL48 77 aa9.68□□□□□ -0.86
COL20A1-205ENST00000471582 MIR22HGQ0VDD5 57 aa9.67□□□□□ -0.86
COL20A1-205ENST00000471582 KTN1-AS1Q86SY8 53 aa9.67□□□□□ -0.86
COL20A1-205ENST00000471582 TPRXLQ17RH7 258 aa9.62□□□□□ -0.87
COL20A1-205ENST00000471582 RBM12B-AS1Q9P1G2 102 aa9.54□□□□□ -0.88
COL20A1-205ENST00000471582 HERC1Q15751 4861 aa9.53□□□□□ -0.88
COL20A1-205ENST00000471582 A0A1B0GU33 70 aa9.48□□□□□ -0.89
COL20A1-205ENST00000471582 H1FX-AS1Q4G0G2 97 aa9.46□□□□□ -0.9
COL20A1-205ENST00000471582 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
COL20A1-205ENST00000471582 H0YAA0 97 aa9.43□□□□□ -0.9
COL20A1-205ENST00000471582 S4R3F8 94 aa9.43□□□□□ -0.9
COL20A1-205ENST00000471582 LPAP08519 4548 aa9.39□□□□□ -0.91
COL20A1-205ENST00000471582 LRP2P98164 4655 aa9.35□□□□□ -0.91
COL20A1-205ENST00000471582 HMCN2Q8NDA2 5059 aa9.32□□□□□ -0.92
COL20A1-205ENST00000471582 SEC61BP60468 96 aaKnown RBP9.31□□□□□ -0.92
COL20A1-205ENST00000471582 KRTAP10-6P60371 365 aaPredicted RBP9.29□□□□□ -0.92
COL20A1-205ENST00000471582 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
COL20A1-205ENST00000471582 CSAG1Q6PB30 78 aa9.15□□□□□ -0.94
COL20A1-205ENST00000471582 K7ERS5 55 aa9.13□□□□□ -0.95
COL20A1-205ENST00000471582 ADM2Q7Z4H4 148 aa9.13□□□□□ -0.95
COL20A1-205ENST00000471582 P0C880 135 aa9.11□□□□□ -0.95
COL20A1-205ENST00000471582 PRAC1Q96KF2 57 aa9.11□□□□□ -0.95
COL20A1-205ENST00000471582 KRTAP13-4Q3LI77 160 aa9.11□□□□□ -0.95
COL20A1-205ENST00000471582 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
COL20A1-205ENST00000471582 LINC01554Q52M75 96 aa9.01□□□□□ -0.97
COL20A1-205ENST00000471582 KRTAP4-1Q9BYQ7 146 aa9□□□□□ -0.97
COL20A1-205ENST00000471582 UBR4Q5T4S7 5183 aa8.99□□□□□ -0.97
COL20A1-205ENST00000471582 A0A0D9SG42 100 aa8.97□□□□□ -0.97
COL20A1-205ENST00000471582 MUC2Q02817 5179 aa8.94□□□□□ -0.98
COL20A1-205ENST00000471582 M0QZ58 72 aa8.93□□□□□ -0.98
COL20A1-205ENST00000471582 KRTAP19-2Q3LHN2 52 aa8.86□□□□□ -0.99
COL20A1-205ENST00000471582 ROMO1P60602 79 aa8.85□□□□□ -0.99
COL20A1-205ENST00000471582 RNF213Q63HN8 5207 aa8.83□□□□□ -1
COL20A1-205ENST00000471582 KRTAP12-2P59991 146 aa8.8□□□□□ -1
COL20A1-205ENST00000471582 H3BS24 57 aa8.79□□□□□ -1
COL20A1-205ENST00000471582 KRTAP12-1P59990 96 aa8.79□□□□□ -1
COL20A1-205ENST00000471582 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
COL20A1-205ENST00000471582 R4GN34 69 aa8.72□□□□□ -1.01
COL20A1-205ENST00000471582 SPINT4Q6UDR6 99 aa8.72□□□□□ -1.01
COL20A1-205ENST00000471582 FLGP20930 4061 aaPredicted RBP8.65□□□□□ -1.02
COL20A1-205ENST00000471582 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
COL20A1-205ENST00000471582 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
COL20A1-205ENST00000471582 FAT4Q6V0I7 4981 aa8.57□□□□□ -1.04
COL20A1-205ENST00000471582 LCE2CQ5TA81 110 aa8.56□□□□□ -1.04
COL20A1-205ENST00000471582 C10orf95Q9H7T3 257 aa8.4□□□□□ -1.06
COL20A1-205ENST00000471582 MT1HP80294 61 aa8.39□□□□□ -1.07
COL20A1-205ENST00000471582 M0R2T5 61 aa8.37□□□□□ -1.07
COL20A1-205ENST00000471582 CAMK2N1Q7Z7J9 78 aa8.23□□□□□ -1.09
COL20A1-205ENST00000471582 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
COL20A1-205ENST00000471582 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.11
COL20A1-205ENST00000471582 KRTAP9-8Q9BYQ0 159 aa8.08□□□□□ -1.12
COL20A1-205ENST00000471582 MT2AP02795 61 aa8.07□□□□□ -1.12
COL20A1-205ENST00000471582 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
COL20A1-205ENST00000471582 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
COL20A1-205ENST00000471582 MT1FP04733 61 aa8.02□□□□□ -1.13
COL20A1-205ENST00000471582 PP632Q6XCG6 107 aa8.02□□□□□ -1.13
COL20A1-205ENST00000471582 PLAC4Q8WY50 150 aa7.97□□□□□ -1.13
COL20A1-205ENST00000471582 TNP1P09430 55 aa7.93□□□□□ -1.14
COL20A1-205ENST00000471582 KRTAP15-1Q3LI76 137 aa7.93□□□□□ -1.14
COL20A1-205ENST00000471582 KRTAP23-1A1A580 65 aa7.88□□□□□ -1.15
COL20A1-205ENST00000471582 KRTAP19-8Q3LI54 63 aa7.84□□□□□ -1.15
COL20A1-205ENST00000471582 KRTAP9-3Q9BYQ3 159 aa7.79□□□□□ -1.16
COL20A1-205ENST00000471582 NDUFAF8A1L188 74 aa7.76□□□□□ -1.17
COL20A1-205ENST00000471582 MT1BP07438 61 aa7.69□□□□□ -1.18
COL20A1-205ENST00000471582 KRTAP10-5P60370 271 aa7.57□□□□□ -1.2
COL20A1-205ENST00000471582 MT1XP80297 61 aa7.56□□□□□ -1.2
COL20A1-205ENST00000471582 LCE2BO14633 110 aa7.56□□□□□ -1.2
COL20A1-205ENST00000471582 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
COL20A1-205ENST00000471582 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
COL20A1-205ENST00000471582 USH2AO75445 5202 aa7.46□□□□□ -1.22
COL20A1-205ENST00000471582 PRO2289Q9P1D8 64 aa7.42□□□□□ -1.22
COL20A1-205ENST00000471582 KRTAP8-1Q8IUC2 63 aa7.39□□□□□ -1.23
COL20A1-205ENST00000471582 A0A0A0MQY5 61 aa7.39□□□□□ -1.23
COL20A1-205ENST00000471582 FSIP2Q5CZC0 6907 aa7.36□□□□□ -1.23
COL20A1-205ENST00000471582 KRTAP10-12P60413 245 aa7.35□□□□□ -1.23
COL20A1-205ENST00000471582 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
COL20A1-205ENST00000471582 LUZP6Q538Z0 58 aa7.33□□□□□ -1.24
COL20A1-205ENST00000471582 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
COL20A1-205ENST00000471582 KRTAP10-7P60409 375 aaPredicted RBP7.29□□□□□ -1.24
COL20A1-205ENST00000471582 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
COL20A1-205ENST00000471582 KRTAP12-3P60328 96 aa7.19□□□□□ -1.26
COL20A1-205ENST00000471582 KRTAP19-6Q3LI70 58 aa7.11□□□□□ -1.27
COL20A1-205ENST00000471582 CRCT1Q9UGL9 99 aa7□□□□□ -1.29
COL20A1-205ENST00000471582 FCGBPQ9Y6R7 5405 aaPredicted RBP6.98□□□□□ -1.29
COL20A1-205ENST00000471582 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
COL20A1-205ENST00000471582 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
COL20A1-205ENST00000471582 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
COL20A1-205ENST00000471582 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
COL20A1-205ENST00000471582 KMT2DO14686 5537 aa6.8□□□□□ -1.32
COL20A1-205ENST00000471582 LCE3CQ5T5A8 94 aa6.76□□□□□ -1.33
COL20A1-205ENST00000471582 KRTAP19-7Q3SYF9 63 aa6.75□□□□□ -1.33
COL20A1-205ENST00000471582 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
COL20A1-205ENST00000471582 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
COL20A1-205ENST00000471582 MT1EP04732 61 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms