RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 MP68P56378 58 aa7.1□□□□□ -1.27
HDAC6-218ENST00000470942 OCR1Q9BZK8 76 aa7.09□□□□□ -1.27
HDAC6-218ENST00000470942 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
HDAC6-218ENST00000470942 NDUFC1O43677 76 aa7.06□□□□□ -1.28
HDAC6-218ENST00000470942 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
HDAC6-218ENST00000470942 A8MUN3 132 aa7.04□□□□□ -1.28
HDAC6-218ENST00000470942 Q5VV11 94 aa7.04□□□□□ -1.28
HDAC6-218ENST00000470942 IMUPQ9GZP8 106 aa7.03□□□□□ -1.28
HDAC6-218ENST00000470942 MACF1Q9UPN3 7388 aaKnown RBP7.01□□□□□ -1.29
HDAC6-218ENST00000470942 SCGB1A1P11684 91 aa7.01□□□□□ -1.29
HDAC6-218ENST00000470942 MT1BP07438 61 aa7□□□□□ -1.29
HDAC6-218ENST00000470942 KRTAP19-8Q3LI54 63 aa7□□□□□ -1.29
HDAC6-218ENST00000470942 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
HDAC6-218ENST00000470942 H3BPC8 53 aa6.97□□□□□ -1.29
HDAC6-218ENST00000470942 A6NN06 94 aa6.94□□□□□ -1.3
HDAC6-218ENST00000470942 H0YAA0 97 aa6.94□□□□□ -1.3
HDAC6-218ENST00000470942 K7ERU9 68 aa6.94□□□□□ -1.3
HDAC6-218ENST00000470942 SYNE2Q8WXH0 6885 aaKnown RBP6.94□□□□□ -1.3
HDAC6-218ENST00000470942 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
HDAC6-218ENST00000470942 MT-ATP8P03928 68 aa6.87□□□□□ -1.31
HDAC6-218ENST00000470942 DMAC1Q96GE9 116 aa6.85□□□□□ -1.31
HDAC6-218ENST00000470942 PCP4P48539 62 aa6.84□□□□□ -1.31
HDAC6-218ENST00000470942 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
HDAC6-218ENST00000470942 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
HDAC6-218ENST00000470942 SMIM20Q8N5G0 67 aa6.8□□□□□ -1.32
HDAC6-218ENST00000470942 TRAV7A0A075B6U4 112 aa6.79□□□□□ -1.32
HDAC6-218ENST00000470942 P0C880 135 aa6.75□□□□□ -1.33
HDAC6-218ENST00000470942 C20orf197Q8N268 126 aa6.75□□□□□ -1.33
HDAC6-218ENST00000470942 ACYP2P14621 99 aa6.74□□□□□ -1.33
HDAC6-218ENST00000470942 R4GN34 69 aa6.74□□□□□ -1.33
HDAC6-218ENST00000470942 M0QZ58 72 aa6.69□□□□□ -1.34
HDAC6-218ENST00000470942 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
HDAC6-218ENST00000470942 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
HDAC6-218ENST00000470942 SNURFQ9Y675 71 aa6.67□□□□□ -1.34
HDAC6-218ENST00000470942 SPTSSBQ8NFR3 76 aa6.65□□□□□ -1.34
HDAC6-218ENST00000470942 CHKB-CPT1BH3BT56 60 aa6.63□□□□□ -1.35
HDAC6-218ENST00000470942 PRO2289Q9P1D8 64 aa6.63□□□□□ -1.35
HDAC6-218ENST00000470942 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
HDAC6-218ENST00000470942 MT1XP80297 61 aa6.58□□□□□ -1.36
HDAC6-218ENST00000470942 SERP2Q8N6R1 65 aa6.58□□□□□ -1.36
HDAC6-218ENST00000470942 SPANXA2-OT1Q8N9U9 137 aa6.55□□□□□ -1.36
HDAC6-218ENST00000470942 KRTAP5-9P26371 169 aa6.52□□□□□ -1.37
HDAC6-218ENST00000470942 MUC12Q9UKN1 5478 aa6.51□□□□□ -1.37
HDAC6-218ENST00000470942 NEBP20929 6669 aa6.5□□□□□ -1.37
HDAC6-218ENST00000470942 KMT2DO14686 5537 aa6.43□□□□□ -1.38
HDAC6-218ENST00000470942 KRTAP12-2P59991 146 aa6.41□□□□□ -1.38
HDAC6-218ENST00000470942 SVIPQ8NHG7 77 aa6.4□□□□□ -1.38
HDAC6-218ENST00000470942 SPRR2FQ96RM1 72 aa6.39□□□□□ -1.39
HDAC6-218ENST00000470942 COX7CP15954 63 aa6.38□□□□□ -1.39
HDAC6-218ENST00000470942 COA5Q86WW8 74 aa6.38□□□□□ -1.39
HDAC6-218ENST00000470942 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
HDAC6-218ENST00000470942 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
HDAC6-218ENST00000470942 ANAPC13Q9BS18 74 aa6.33□□□□□ -1.4
HDAC6-218ENST00000470942 KRTAP20-1Q3LI63 56 aa6.32□□□□□ -1.4
HDAC6-218ENST00000470942 KRTAP13-4Q3LI77 160 aa6.31□□□□□ -1.4
HDAC6-218ENST00000470942 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
HDAC6-218ENST00000470942 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
HDAC6-218ENST00000470942 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-218ENST00000470942 SPRR2EP22531 72 aa6.28□□□□□ -1.4
HDAC6-218ENST00000470942 SPRR2BP35325 72 aa6.28□□□□□ -1.4
HDAC6-218ENST00000470942 SPRR2AP35326 72 aa6.28□□□□□ -1.4
HDAC6-218ENST00000470942 SEC61GP60059 68 aa6.28□□□□□ -1.4
HDAC6-218ENST00000470942 SERP1Q9Y6X1 66 aa6.27□□□□□ -1.41
HDAC6-218ENST00000470942 H7BZZ5 65 aa6.26□□□□□ -1.41
HDAC6-218ENST00000470942 CYSTM1Q9H1C7 97 aa6.26□□□□□ -1.41
HDAC6-218ENST00000470942 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
HDAC6-218ENST00000470942 CCDC179H3BU77 68 aa6.24□□□□□ -1.41
HDAC6-218ENST00000470942 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
HDAC6-218ENST00000470942 A0A0D9SG42 100 aa6.18□□□□□ -1.42
HDAC6-218ENST00000470942 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
HDAC6-218ENST00000470942 LCE1AQ5T7P2 110 aa6.17□□□□□ -1.42
HDAC6-218ENST00000470942 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
HDAC6-218ENST00000470942 A0A1B0GU33 70 aa6.15□□□□□ -1.42
HDAC6-218ENST00000470942 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.42
HDAC6-218ENST00000470942 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
HDAC6-218ENST00000470942 A0A1B0GU69 56 aa6.07□□□□□ -1.44
HDAC6-218ENST00000470942 SPRR2DP22532 72 aa6.07□□□□□ -1.44
HDAC6-218ENST00000470942 KRTAP12-1P59990 96 aa6□□□□□ -1.45
HDAC6-218ENST00000470942 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
HDAC6-218ENST00000470942 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
HDAC6-218ENST00000470942 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
HDAC6-218ENST00000470942 KRTAP2-2Q9BYT5 123 aa5.97□□□□□ -1.45
HDAC6-218ENST00000470942 KRTAP2-1Q9BYU5 128 aa5.97□□□□□ -1.45
HDAC6-218ENST00000470942 TMEM258P61165 79 aa5.96□□□□□ -1.46
HDAC6-218ENST00000470942 A8MU10 97 aa5.93□□□□□ -1.46
HDAC6-218ENST00000470942 PRR15LQ9BU68 103 aa5.91□□□□□ -1.46
HDAC6-218ENST00000470942 LCE3BQ5TA77 95 aa5.9□□□□□ -1.46
HDAC6-218ENST00000470942 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
HDAC6-218ENST00000470942 MT1EP04732 61 aa5.83□□□□□ -1.48
HDAC6-218ENST00000470942 LINC01558Q9Y6Z2 57 aa5.83□□□□□ -1.48
HDAC6-218ENST00000470942 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
HDAC6-218ENST00000470942 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
HDAC6-218ENST00000470942 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
HDAC6-218ENST00000470942 C10orf95Q9H7T3 257 aa5.75□□□□□ -1.49
HDAC6-218ENST00000470942 TNP1P09430 55 aa5.73□□□□□ -1.49
HDAC6-218ENST00000470942 UQCR11O14957 56 aa5.7□□□□□ -1.5
HDAC6-218ENST00000470942 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
HDAC6-218ENST00000470942 MT1GP13640 62 aa5.65□□□□□ -1.5
HDAC6-218ENST00000470942 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
HDAC6-218ENST00000470942 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms