RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PCOTHQ58A44 107 aa1.89□□□□□ -2.11
COL9A1-206ENST00000470652 FP248Q71RG6 208 aaPredicted RBP1.89□□□□□ -2.11
COL9A1-206ENST00000470652 C8orf17Q9NRJ1 99 aa1.89□□□□□ -2.11
COL9A1-206ENST00000470652 SS18L2Q9UHA2 77 aa1.89□□□□□ -2.11
COL9A1-206ENST00000470652 PRR15Q8IV56 129 aa1.88□□□□□ -2.11
COL9A1-206ENST00000470652 LINC00313P59037 77 aa1.87□□□□□ -2.11
COL9A1-206ENST00000470652 RPL37P61927 97 aaKnown RBP1.87□□□□□ -2.11
COL9A1-206ENST00000470652 UBL5Q9BZL1 73 aa1.87□□□□□ -2.11
COL9A1-206ENST00000470652 FLGP20930 4061 aaPredicted RBP1.86□□□□□ -2.11
COL9A1-206ENST00000470652 FAM240AA0A1B0GVK7 77 aa1.86□□□□□ -2.11
COL9A1-206ENST00000470652 HIST1H4AP62805 103 aaKnown RBP1.86□□□□□ -2.11
COL9A1-206ENST00000470652 HCG22E2RYF7 251 aa1.85□□□□□ -2.11
COL9A1-206ENST00000470652 J3KT08 172 aa1.85□□□□□ -2.11
COL9A1-206ENST00000470652 C20orf166-AS1Q96NR2 134 aa1.85□□□□□ -2.11
COL9A1-206ENST00000470652 A0A1B0GW54 56 aa1.84□□□□□ -2.11
COL9A1-206ENST00000470652 hDV103S1A0JD37 113 aa1.84□□□□□ -2.11
COL9A1-206ENST00000470652 NDUFS5O43920 106 aa1.84□□□□□ -2.11
COL9A1-206ENST00000470652 ACYP1P07311 99 aa1.84□□□□□ -2.11
COL9A1-206ENST00000470652 SEC61GP60059 68 aa1.84□□□□□ -2.11
COL9A1-206ENST00000470652 KRTAP19-2Q3LHN2 52 aa1.84□□□□□ -2.11
COL9A1-206ENST00000470652 CASC2Q6XLA1 102 aa1.84□□□□□ -2.11
COL9A1-206ENST00000470652 LINC00643Q86TS7 51 aa1.84□□□□□ -2.11
COL9A1-206ENST00000470652 MRPL34Q9BQ48 92 aaKnown RBP1.84□□□□□ -2.11
COL9A1-206ENST00000470652 C8orf87E5RJ46 101 aa1.83□□□□□ -2.12
COL9A1-206ENST00000470652 K7ERU9 68 aa1.83□□□□□ -2.12
COL9A1-206ENST00000470652 NDUFB1O75438 58 aa1.83□□□□□ -2.12
COL9A1-206ENST00000470652 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
COL9A1-206ENST00000470652 TMEM254Q8TBM7 123 aa1.83□□□□□ -2.12
COL9A1-206ENST00000470652 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
COL9A1-206ENST00000470652 J3QR89 54 aa1.82□□□□□ -2.12
COL9A1-206ENST00000470652 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
COL9A1-206ENST00000470652 ZCCHC13Q8WW36 166 aaKnown RBP1.82□□□□□ -2.12
COL9A1-206ENST00000470652 FAM236AA0A1B0GUQ0 79 aa1.81□□□□□ -2.12
COL9A1-206ENST00000470652 FAM236BA0A1B0GV22 79 aa1.81□□□□□ -2.12
COL9A1-206ENST00000470652 HRES1P13985 223 aa1.81□□□□□ -2.12
COL9A1-206ENST00000470652 ATP5EP2Q5VTU8 51 aa1.81□□□□□ -2.12
COL9A1-206ENST00000470652 ATP11AUNQ6ZP68 121 aa1.81□□□□□ -2.12
COL9A1-206ENST00000470652 SPINK7P58062 85 aa1.8□□□□□ -2.12
COL9A1-206ENST00000470652 SPINT4Q6UDR6 99 aa1.8□□□□□ -2.12
COL9A1-206ENST00000470652 H0Y9P7 68 aa1.78□□□□□ -2.12
COL9A1-206ENST00000470652 MT1HP80294 61 aa1.78□□□□□ -2.12
COL9A1-206ENST00000470652 KLKP1Q107X0 134 aa1.78□□□□□ -2.12
COL9A1-206ENST00000470652 C4orf26Q17RF5 130 aa1.78□□□□□ -2.12
COL9A1-206ENST00000470652 CYSTM1Q9H1C7 97 aa1.78□□□□□ -2.12
COL9A1-206ENST00000470652 P0C880 135 aa1.77□□□□□ -2.13
COL9A1-206ENST00000470652 SPANXA2-OT1Q8N9U9 137 aa1.77□□□□□ -2.13
COL9A1-206ENST00000470652 SNURFQ9Y675 71 aa1.77□□□□□ -2.13
COL9A1-206ENST00000470652 TRAV22A0A0B4J277 110 aa1.76□□□□□ -2.13
COL9A1-206ENST00000470652 SCGB1A1P11684 91 aa1.76□□□□□ -2.13
COL9A1-206ENST00000470652 C1orf64Q8NEQ6 169 aa1.76□□□□□ -2.13
COL9A1-206ENST00000470652 LINC00208Q96KT6 92 aa1.76□□□□□ -2.13
COL9A1-206ENST00000470652 CYP4F30PQ9H0H9 118 aa1.76□□□□□ -2.13
COL9A1-206ENST00000470652 UQCRQO14949 82 aa1.75□□□□□ -2.13
COL9A1-206ENST00000470652 COX6B2Q6YFQ2 88 aa1.75□□□□□ -2.13
COL9A1-206ENST00000470652 C7orf65Q6ZTY9 151 aa1.75□□□□□ -2.13
COL9A1-206ENST00000470652 IMUPQ9GZP8 106 aa1.75□□□□□ -2.13
COL9A1-206ENST00000470652 FAM236DA0A1B0GTK5 79 aa1.74□□□□□ -2.13
COL9A1-206ENST00000470652 CCDC179H3BU77 68 aa1.74□□□□□ -2.13
COL9A1-206ENST00000470652 FAM236CP0DP71 79 aa1.74□□□□□ -2.13
COL9A1-206ENST00000470652 TP53AIP1Q9HCN2 124 aa1.74□□□□□ -2.13
COL9A1-206ENST00000470652 TRAV7A0A075B6U4 112 aa1.73□□□□□ -2.13
COL9A1-206ENST00000470652 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
COL9A1-206ENST00000470652 C20orf197Q8N268 126 aa1.73□□□□□ -2.13
COL9A1-206ENST00000470652 ATOX1O00244 68 aa1.72□□□□□ -2.13
COL9A1-206ENST00000470652 SERP2Q8N6R1 65 aa1.72□□□□□ -2.13
COL9A1-206ENST00000470652 LOC101927531A0A1B0GV80 90 aa1.71□□□□□ -2.14
COL9A1-206ENST00000470652 MP68P56378 58 aa1.71□□□□□ -2.14
COL9A1-206ENST00000470652 LCA10Q71F78 164 aa1.71□□□□□ -2.14
COL9A1-206ENST00000470652 ANAPC13Q9BS18 74 aa1.71□□□□□ -2.14
COL9A1-206ENST00000470652 RBM12B-AS1Q9P1G2 102 aa1.71□□□□□ -2.14
COL9A1-206ENST00000470652 M0R2T5 61 aa1.7□□□□□ -2.14
COL9A1-206ENST00000470652 COX7CP15954 63 aa1.7□□□□□ -2.14
COL9A1-206ENST00000470652 H1FX-AS1Q4G0G2 97 aa1.7□□□□□ -2.14
COL9A1-206ENST00000470652 FSIP2Q5CZC0 6907 aa1.7□□□□□ -2.14
COL9A1-206ENST00000470652 USH2AO75445 5202 aa1.69□□□□□ -2.14
COL9A1-206ENST00000470652 MT2AP02795 61 aa1.69□□□□□ -2.14
COL9A1-206ENST00000470652 MT1FP04733 61 aa1.69□□□□□ -2.14
COL9A1-206ENST00000470652 CRCT1Q9UGL9 99 aa1.69□□□□□ -2.14
COL9A1-206ENST00000470652 H7BZZ5 65 aa1.68□□□□□ -2.14
COL9A1-206ENST00000470652 S4R3F8 94 aa1.68□□□□□ -2.14
COL9A1-206ENST00000470652 SMIM20Q8N5G0 67 aa1.67□□□□□ -2.14
COL9A1-206ENST00000470652 DMAC1Q96GE9 116 aa1.67□□□□□ -2.14
COL9A1-206ENST00000470652 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
COL9A1-206ENST00000470652 H3BPC8 53 aa1.66□□□□□ -2.14
COL9A1-206ENST00000470652 ADM2Q7Z4H4 148 aa1.64□□□□□ -2.15
COL9A1-206ENST00000470652 SMIM26A0A096LP01 95 aa1.63□□□□□ -2.15
COL9A1-206ENST00000470652 COA5Q86WW8 74 aa1.63□□□□□ -2.15
COL9A1-206ENST00000470652 CSAG1Q6PB30 78 aa1.62□□□□□ -2.15
COL9A1-206ENST00000470652 A8MUN3 132 aa1.61□□□□□ -2.15
COL9A1-206ENST00000470652 NDUFC1O43677 76 aa1.61□□□□□ -2.15
COL9A1-206ENST00000470652 CHKB-CPT1BH3BT56 60 aa1.6□□□□□ -2.15
COL9A1-206ENST00000470652 ACYP2P14621 99 aa1.6□□□□□ -2.15
COL9A1-206ENST00000470652 KRTAP13-4Q3LI77 160 aa1.59□□□□□ -2.15
COL9A1-206ENST00000470652 MT1BP07438 61 aa1.58□□□□□ -2.16
COL9A1-206ENST00000470652 LUZP6Q538Z0 58 aa1.58□□□□□ -2.16
COL9A1-206ENST00000470652 FCGBPQ9Y6R7 5405 aaPredicted RBP1.58□□□□□ -2.16
COL9A1-206ENST00000470652 TMEM258P61165 79 aa1.57□□□□□ -2.16
COL9A1-206ENST00000470652 M0QZ58 72 aa1.55□□□□□ -2.16
COL9A1-206ENST00000470652 LINC01554Q52M75 96 aa1.55□□□□□ -2.16
COL9A1-206ENST00000470652 SPATA8Q6RVD6 105 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms