RNA–Protein interactions for RNA: ENST00000470271.5

CTPS1-206, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-206ENST00000470271 SCGB1A1P11684 91 aa9.08□□□□□ -0.96
CTPS1-206ENST00000470271 A8MUN3 132 aa9.07□□□□□ -0.96
CTPS1-206ENST00000470271 KRTAP19-6Q3LI70 58 aa9.07□□□□□ -0.96
CTPS1-206ENST00000470271 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.06□□□□□ -0.96
CTPS1-206ENST00000470271 H3BPC8 53 aa9.04□□□□□ -0.96
CTPS1-206ENST00000470271 K7ERU9 68 aa9.03□□□□□ -0.96
CTPS1-206ENST00000470271 NDUFC1O43677 76 aa9.02□□□□□ -0.97
CTPS1-206ENST00000470271 IMUPQ9GZP8 106 aa9.02□□□□□ -0.97
CTPS1-206ENST00000470271 MT-ATP8P03928 68 aa8.97□□□□□ -0.97
CTPS1-206ENST00000470271 SPRR2GQ9BYE4 73 aa8.97□□□□□ -0.97
CTPS1-206ENST00000470271 MACF1Q9UPN3 7388 aaKnown RBP8.91□□□□□ -0.98
CTPS1-206ENST00000470271 KRTAP9-7A8MTY7 169 aa8.9□□□□□ -0.98
CTPS1-206ENST00000470271 H0YAA0 97 aa8.9□□□□□ -0.98
CTPS1-206ENST00000470271 KRTAP19-8Q3LI54 63 aa8.89□□□□□ -0.99
CTPS1-206ENST00000470271 Q5VV11 94 aa8.89□□□□□ -0.99
CTPS1-206ENST00000470271 CRIPTQ9P021 101 aa8.89□□□□□ -0.99
CTPS1-206ENST00000470271 MT1BP07438 61 aa8.87□□□□□ -0.99
CTPS1-206ENST00000470271 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
CTPS1-206ENST00000470271 DMAC1Q96GE9 116 aa8.85□□□□□ -0.99
CTPS1-206ENST00000470271 TRAV7A0A075B6U4 112 aa8.84□□□□□ -0.99
CTPS1-206ENST00000470271 ADM2Q7Z4H4 148 aa8.81□□□□□ -1
CTPS1-206ENST00000470271 SYNE2Q8WXH0 6885 aaKnown RBP8.8□□□□□ -1
CTPS1-206ENST00000470271 A6NN06 94 aa8.73□□□□□ -1.01
CTPS1-206ENST00000470271 ACYP2P14621 99 aa8.68□□□□□ -1.02
CTPS1-206ENST00000470271 SNURFQ9Y675 71 aa8.65□□□□□ -1.02
CTPS1-206ENST00000470271 KRTAP10-5P60370 271 aa8.64□□□□□ -1.03
CTPS1-206ENST00000470271 C20orf197Q8N268 126 aa8.64□□□□□ -1.03
CTPS1-206ENST00000470271 P0C880 135 aa8.62□□□□□ -1.03
CTPS1-206ENST00000470271 SERP2Q8N6R1 65 aa8.59□□□□□ -1.03
CTPS1-206ENST00000470271 R4GN34 69 aa8.58□□□□□ -1.04
CTPS1-206ENST00000470271 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
CTPS1-206ENST00000470271 SPTSSBQ8NFR3 76 aa8.55□□□□□ -1.04
CTPS1-206ENST00000470271 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
CTPS1-206ENST00000470271 KRTAP6-3Q3LI67 103 aa8.53□□□□□ -1.04
CTPS1-206ENST00000470271 M0QZ58 72 aa8.52□□□□□ -1.05
CTPS1-206ENST00000470271 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
CTPS1-206ENST00000470271 PLAC4Q8WY50 150 aa8.47□□□□□ -1.05
CTPS1-206ENST00000470271 LINC01554Q52M75 96 aa8.39□□□□□ -1.07
CTPS1-206ENST00000470271 PRO2289Q9P1D8 64 aa8.39□□□□□ -1.07
CTPS1-206ENST00000470271 COX7CP15954 63 aa8.36□□□□□ -1.07
CTPS1-206ENST00000470271 MT1XP80297 61 aa8.36□□□□□ -1.07
CTPS1-206ENST00000470271 COA5Q86WW8 74 aa8.27□□□□□ -1.09
CTPS1-206ENST00000470271 MUC12Q9UKN1 5478 aa8.26□□□□□ -1.09
CTPS1-206ENST00000470271 NEBP20929 6669 aa8.26□□□□□ -1.09
CTPS1-206ENST00000470271 H7BZZ5 65 aa8.21□□□□□ -1.1
CTPS1-206ENST00000470271 KRTAP5-9P26371 169 aa8.2□□□□□ -1.1
CTPS1-206ENST00000470271 CYSTM1Q9H1C7 97 aa8.2□□□□□ -1.1
CTPS1-206ENST00000470271 KMT2DO14686 5537 aa8.19□□□□□ -1.1
CTPS1-206ENST00000470271 ANAPC13Q9BS18 74 aa8.14□□□□□ -1.11
CTPS1-206ENST00000470271 KRTAP12-2P59991 146 aa8.13□□□□□ -1.11
CTPS1-206ENST00000470271 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
CTPS1-206ENST00000470271 SEC61GP60059 68 aa8.09□□□□□ -1.11
CTPS1-206ENST00000470271 SERP1Q9Y6X1 66 aa8.07□□□□□ -1.12
CTPS1-206ENST00000470271 MDN1Q9NU22 5596 aa8.06□□□□□ -1.12
CTPS1-206ENST00000470271 KRTAP8-1Q8IUC2 63 aa8.02□□□□□ -1.13
CTPS1-206ENST00000470271 SPRR2FQ96RM1 72 aa8□□□□□ -1.13
CTPS1-206ENST00000470271 CCDC179H3BU77 68 aa7.97□□□□□ -1.13
CTPS1-206ENST00000470271 KRTAP10-7P60409 375 aaPredicted RBP7.97□□□□□ -1.13
CTPS1-206ENST00000470271 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
CTPS1-206ENST00000470271 KRTAP4-8Q9BYQ9 185 aa7.95□□□□□ -1.14
CTPS1-206ENST00000470271 KRTAP10-12P60413 245 aa7.94□□□□□ -1.14
CTPS1-206ENST00000470271 A0A1B0GU33 70 aa7.93□□□□□ -1.14
CTPS1-206ENST00000470271 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
CTPS1-206ENST00000470271 SPATA8Q6RVD6 105 aa7.9□□□□□ -1.14
CTPS1-206ENST00000470271 A0A0D9SG42 100 aa7.89□□□□□ -1.15
CTPS1-206ENST00000470271 A0A1B0GU69 56 aa7.85□□□□□ -1.15
CTPS1-206ENST00000470271 SPRR2EP22531 72 aa7.84□□□□□ -1.15
CTPS1-206ENST00000470271 SPRR2BP35325 72 aa7.84□□□□□ -1.15
CTPS1-206ENST00000470271 SPRR2AP35326 72 aa7.84□□□□□ -1.15
CTPS1-206ENST00000470271 ATP5EP56381 51 aaPredicted RBP7.84□□□□□ -1.15
CTPS1-206ENST00000470271 KRTAP20-1Q3LI63 56 aa7.82□□□□□ -1.16
CTPS1-206ENST00000470271 SPINT4Q6UDR6 99 aa7.77□□□□□ -1.17
CTPS1-206ENST00000470271 LCE1AQ5T7P2 110 aa7.75□□□□□ -1.17
CTPS1-206ENST00000470271 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
CTPS1-206ENST00000470271 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
CTPS1-206ENST00000470271 TMEM258P61165 79 aa7.68□□□□□ -1.18
CTPS1-206ENST00000470271 KRTAP2-3P0C7H8 128 aa7.66□□□□□ -1.18
CTPS1-206ENST00000470271 PRR15LQ9BU68 103 aa7.66□□□□□ -1.18
CTPS1-206ENST00000470271 KRTAP2-4Q9BYR9 128 aa7.66□□□□□ -1.18
CTPS1-206ENST00000470271 A8MU10 97 aa7.63□□□□□ -1.19
CTPS1-206ENST00000470271 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
CTPS1-206ENST00000470271 SPRR2DP22532 72 aa7.58□□□□□ -1.2
CTPS1-206ENST00000470271 KRTAP19-7Q3SYF9 63 aa7.46□□□□□ -1.22
CTPS1-206ENST00000470271 KRTAP2-2Q9BYT5 123 aa7.43□□□□□ -1.22
CTPS1-206ENST00000470271 KRTAP2-1Q9BYU5 128 aa7.43□□□□□ -1.22
CTPS1-206ENST00000470271 UQCR11O14957 56 aa7.41□□□□□ -1.22
CTPS1-206ENST00000470271 MT1EP04732 61 aa7.4□□□□□ -1.22
CTPS1-206ENST00000470271 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
CTPS1-206ENST00000470271 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
CTPS1-206ENST00000470271 TNP1P09430 55 aa7.34□□□□□ -1.23
CTPS1-206ENST00000470271 KRTAP19-5Q3LI72 72 aa7.32□□□□□ -1.24
CTPS1-206ENST00000470271 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
CTPS1-206ENST00000470271 KRTAP19-3Q7Z4W3 81 aa7.31□□□□□ -1.24
CTPS1-206ENST00000470271 V9GYY9 64 aa7.26□□□□□ -1.25
CTPS1-206ENST00000470271 MIR22HGQ0VDD5 57 aa7.25□□□□□ -1.25
CTPS1-206ENST00000470271 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
CTPS1-206ENST00000470271 Q1T7F1 81 aa7.2□□□□□ -1.26
CTPS1-206ENST00000470271 PSPHP1O15172 72 aa7.19□□□□□ -1.26
CTPS1-206ENST00000470271 DSTQ03001 7570 aaKnown RBP7.18□□□□□ -1.26
CTPS1-206ENST00000470271 MT1GP13640 62 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms