RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 LRP1Q07954 4544 aaKnown RBP10.7□□□□□ -0.7
CDHR3-207ENST00000470188 A0A1B0GU33 70 aa10.69□□□□□ -0.7
CDHR3-207ENST00000470188 KRTAP17-1Q9BYP8 105 aa10.68□□□□□ -0.7
CDHR3-207ENST00000470188 KRTAP3-1Q9BYR8 98 aa10.66□□□□□ -0.7
CDHR3-207ENST00000470188 H1FX-AS1Q4G0G2 97 aa10.64□□□□□ -0.71
CDHR3-207ENST00000470188 KRTAP25-1Q3LHN0 102 aa10.63□□□□□ -0.71
CDHR3-207ENST00000470188 COX6B2Q6YFQ2 88 aa10.55□□□□□ -0.72
CDHR3-207ENST00000470188 H3BS24 57 aa10.54□□□□□ -0.72
CDHR3-207ENST00000470188 K7ERS5 55 aa10.5□□□□□ -0.73
CDHR3-207ENST00000470188 RPL37P61927 97 aaKnown RBP10.5□□□□□ -0.73
CDHR3-207ENST00000470188 XP32Q5T750 250 aa10.47□□□□□ -0.73
CDHR3-207ENST00000470188 DMBT1Q9UGM3 2413 aaPredicted RBP10.46□□□□□ -0.74
CDHR3-207ENST00000470188 MT1HL1P0DM35 61 aa10.42□□□□□ -0.74
CDHR3-207ENST00000470188 ROMO1P60602 79 aa10.42□□□□□ -0.74
CDHR3-207ENST00000470188 MYCBP2O75592 4640 aa10.4□□□□□ -0.74
CDHR3-207ENST00000470188 KRTAP4-5Q9BYR2 181 aa10.39□□□□□ -0.75
CDHR3-207ENST00000470188 BIRC6Q9NR09 4857 aa10.38□□□□□ -0.75
CDHR3-207ENST00000470188 HERC2O95714 4834 aa10.26□□□□□ -0.77
CDHR3-207ENST00000470188 ABCA13Q86UQ4 5058 aa10.24□□□□□ -0.77
CDHR3-207ENST00000470188 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
CDHR3-207ENST00000470188 CRIPTQ9P021 101 aa10.22□□□□□ -0.77
CDHR3-207ENST00000470188 S4R3F8 94 aa10.19□□□□□ -0.78
CDHR3-207ENST00000470188 KRTAP10-6P60371 365 aaPredicted RBP10.18□□□□□ -0.78
CDHR3-207ENST00000470188 TPRXLQ17RH7 258 aa10.16□□□□□ -0.78
CDHR3-207ENST00000470188 KRTAP13-4Q3LI77 160 aa10.09□□□□□ -0.79
CDHR3-207ENST00000470188 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
CDHR3-207ENST00000470188 P0C880 135 aa10.06□□□□□ -0.8
CDHR3-207ENST00000470188 LRP2P98164 4655 aa10.05□□□□□ -0.8
CDHR3-207ENST00000470188 LPAP08519 4548 aa10.05□□□□□ -0.8
CDHR3-207ENST00000470188 A0A0D9SG42 100 aa10.04□□□□□ -0.8
CDHR3-207ENST00000470188 PCLOQ9Y6V0 5065 aa9.97□□□□□ -0.81
CDHR3-207ENST00000470188 J3QL48 77 aa9.95□□□□□ -0.82
CDHR3-207ENST00000470188 SPINT4Q6UDR6 99 aa9.95□□□□□ -0.82
CDHR3-207ENST00000470188 C10orf95Q9H7T3 257 aa9.84□□□□□ -0.83
CDHR3-207ENST00000470188 KRTAP12-2P59991 146 aa9.81□□□□□ -0.84
CDHR3-207ENST00000470188 SEC61BP60468 96 aaKnown RBP9.8□□□□□ -0.84
CDHR3-207ENST00000470188 KRTAP15-1Q3LI76 137 aa9.77□□□□□ -0.85
CDHR3-207ENST00000470188 KRTAP12-1P59990 96 aa9.75□□□□□ -0.85
CDHR3-207ENST00000470188 HERC1Q15751 4861 aa9.71□□□□□ -0.86
CDHR3-207ENST00000470188 M0QZ58 72 aa9.69□□□□□ -0.86
CDHR3-207ENST00000470188 MUC17Q685J3 4493 aa9.68□□□□□ -0.86
CDHR3-207ENST00000470188 KRTAP4-1Q9BYQ7 146 aa9.63□□□□□ -0.87
CDHR3-207ENST00000470188 NDUFAF8A1L188 74 aa9.61□□□□□ -0.87
CDHR3-207ENST00000470188 HMCN2Q8NDA2 5059 aa9.52□□□□□ -0.89
CDHR3-207ENST00000470188 R4GN34 69 aa9.44□□□□□ -0.9
CDHR3-207ENST00000470188 KRTAP19-2Q3LHN2 52 aa9.44□□□□□ -0.9
CDHR3-207ENST00000470188 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
CDHR3-207ENST00000470188 MUC2Q02817 5179 aa9.25□□□□□ -0.93
CDHR3-207ENST00000470188 UBR4Q5T4S7 5183 aa9.19□□□□□ -0.94
CDHR3-207ENST00000470188 PLAC4Q8WY50 150 aa9.18□□□□□ -0.94
CDHR3-207ENST00000470188 FLGP20930 4061 aaPredicted RBP9.17□□□□□ -0.94
CDHR3-207ENST00000470188 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
CDHR3-207ENST00000470188 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
CDHR3-207ENST00000470188 LCE2CQ5TA81 110 aa8.95□□□□□ -0.98
CDHR3-207ENST00000470188 CAMK2N1Q7Z7J9 78 aa8.95□□□□□ -0.98
CDHR3-207ENST00000470188 LUZP6Q538Z0 58 aa8.89□□□□□ -0.99
CDHR3-207ENST00000470188 FAT4Q6V0I7 4981 aa8.83□□□□□ -1
CDHR3-207ENST00000470188 A0A0A0MQY5 61 aa8.79□□□□□ -1
CDHR3-207ENST00000470188 M0R2T5 61 aa8.76□□□□□ -1.01
CDHR3-207ENST00000470188 MT1HP80294 61 aa8.73□□□□□ -1.01
CDHR3-207ENST00000470188 KRTAP23-1A1A580 65 aa8.69□□□□□ -1.02
CDHR3-207ENST00000470188 SPRR2GQ9BYE4 73 aa8.68□□□□□ -1.02
CDHR3-207ENST00000470188 TNP1P09430 55 aa8.63□□□□□ -1.03
CDHR3-207ENST00000470188 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
CDHR3-207ENST00000470188 MT2AP02795 61 aa8.55□□□□□ -1.04
CDHR3-207ENST00000470188 SPRR5A0A1B0GTR4 108 aa8.54□□□□□ -1.04
CDHR3-207ENST00000470188 MT1FP04733 61 aa8.54□□□□□ -1.04
CDHR3-207ENST00000470188 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
CDHR3-207ENST00000470188 KRTAP9-8Q9BYQ0 159 aa8.5□□□□□ -1.05
CDHR3-207ENST00000470188 LCE2AQ5TA79 106 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-207ENST00000470188 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
CDHR3-207ENST00000470188 MT1BP07438 61 aa8.22□□□□□ -1.09
CDHR3-207ENST00000470188 KRTAP9-3Q9BYQ3 159 aa8.15□□□□□ -1.1
CDHR3-207ENST00000470188 LCE3AQ5TA76 89 aa8.14□□□□□ -1.11
CDHR3-207ENST00000470188 KRTAP10-5P60370 271 aa8.12□□□□□ -1.11
CDHR3-207ENST00000470188 MT1XP80297 61 aa8.11□□□□□ -1.11
CDHR3-207ENST00000470188 KRTAP8-1Q8IUC2 63 aa7.94□□□□□ -1.14
CDHR3-207ENST00000470188 KRTAP10-12P60413 245 aa7.91□□□□□ -1.14
CDHR3-207ENST00000470188 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
CDHR3-207ENST00000470188 KRTAP10-7P60409 375 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-207ENST00000470188 INE1O15225 51 aa7.86□□□□□ -1.15
CDHR3-207ENST00000470188 LCE2BO14633 110 aa7.84□□□□□ -1.15
CDHR3-207ENST00000470188 KRTAP12-3P60328 96 aa7.77□□□□□ -1.17
CDHR3-207ENST00000470188 USH2AO75445 5202 aa7.69□□□□□ -1.18
CDHR3-207ENST00000470188 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-207ENST00000470188 FSIP2Q5CZC0 6907 aa7.55□□□□□ -1.2
CDHR3-207ENST00000470188 KRTAP19-5Q3LI72 72 aa7.51□□□□□ -1.21
CDHR3-207ENST00000470188 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
CDHR3-207ENST00000470188 KRTAP4-8A0A0G2JLE6 195 aa7.4□□□□□ -1.22
CDHR3-207ENST00000470188 KRTAP4-8Q9BYQ9 185 aa7.4□□□□□ -1.22
CDHR3-207ENST00000470188 KMT2DO14686 5537 aa7.39□□□□□ -1.23
CDHR3-207ENST00000470188 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
CDHR3-207ENST00000470188 KRTAP19-6Q3LI70 58 aa7.31□□□□□ -1.24
CDHR3-207ENST00000470188 LCE3CQ5T5A8 94 aa7.3□□□□□ -1.24
CDHR3-207ENST00000470188 KRTAP19-7Q3SYF9 63 aa7.22□□□□□ -1.25
CDHR3-207ENST00000470188 FCGBPQ9Y6R7 5405 aaPredicted RBP7.14□□□□□ -1.27
CDHR3-207ENST00000470188 CRCT1Q9UGL9 99 aa7.06□□□□□ -1.28
CDHR3-207ENST00000470188 MT1EP04732 61 aa7.04□□□□□ -1.28
CDHR3-207ENST00000470188 KRTAP19-4Q3LI73 84 aa7.01□□□□□ -1.29
CDHR3-207ENST00000470188 MT1LQ93083 61 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms