RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 A8MUU9 505 aa3.88□□□□□ -1.79
KDM3A-210ENST00000470160 Q5W150 140 aa3.87□□□□□ -1.79
KDM3A-210ENST00000470160 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
KDM3A-210ENST00000470160 LRP1Q07954 4544 aaKnown RBP3.85□□□□□ -1.79
KDM3A-210ENST00000470160 IGLV7-46A0A075B6I9 117 aa3.85□□□□□ -1.79
KDM3A-210ENST00000470160 IGKV2-30P06310 120 aa3.84□□□□□ -1.79
KDM3A-210ENST00000470160 K7ERS5 55 aa3.83□□□□□ -1.8
KDM3A-210ENST00000470160 BIRC6Q9NR09 4857 aa3.83□□□□□ -1.8
KDM3A-210ENST00000470160 HERC2O95714 4834 aa3.82□□□□□ -1.8
KDM3A-210ENST00000470160 LINC01558Q9Y6Z2 57 aa3.81□□□□□ -1.8
KDM3A-210ENST00000470160 LCE2AQ5TA79 106 aaPredicted RBP3.81□□□□□ -1.8
KDM3A-210ENST00000470160 COA5Q86WW8 74 aa3.8□□□□□ -1.8
KDM3A-210ENST00000470160 KRTAP4-5Q9BYR2 181 aa3.78□□□□□ -1.81
KDM3A-210ENST00000470160 TPRXLQ17RH7 258 aa3.77□□□□□ -1.81
KDM3A-210ENST00000470160 MYCBP2O75592 4640 aa3.77□□□□□ -1.81
KDM3A-210ENST00000470160 RPL37P61927 97 aaKnown RBP3.76□□□□□ -1.81
KDM3A-210ENST00000470160 XP32Q5T750 250 aa3.76□□□□□ -1.81
KDM3A-210ENST00000470160 DMAC1Q96GE9 116 aa3.76□□□□□ -1.81
KDM3A-210ENST00000470160 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
KDM3A-210ENST00000470160 HRES1P13985 223 aa3.75□□□□□ -1.81
KDM3A-210ENST00000470160 C9orf92A6NGG3 77 aa3.74□□□□□ -1.81
KDM3A-210ENST00000470160 PCOTHQ58A44 107 aa3.74□□□□□ -1.81
KDM3A-210ENST00000470160 ABCA13Q86UQ4 5058 aa3.73□□□□□ -1.81
KDM3A-210ENST00000470160 IGKV2D-30A0A075B6S6 120 aa3.73□□□□□ -1.81
KDM3A-210ENST00000470160 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
KDM3A-210ENST00000470160 ACYP2P14621 99 aa3.71□□□□□ -1.82
KDM3A-210ENST00000470160 LORP23490 312 aaPredicted RBP3.71□□□□□ -1.82
KDM3A-210ENST00000470160 MUC17Q685J3 4493 aa3.69□□□□□ -1.82
KDM3A-210ENST00000470160 SPATA8Q6RVD6 105 aa3.66□□□□□ -1.82
KDM3A-210ENST00000470160 DMBT1Q9UGM3 2413 aaPredicted RBP3.65□□□□□ -1.82
KDM3A-210ENST00000470160 COX6B2Q6YFQ2 88 aa3.65□□□□□ -1.82
KDM3A-210ENST00000470160 KRTAP3-1Q9BYR8 98 aa3.65□□□□□ -1.82
KDM3A-210ENST00000470160 CRIPTQ9P021 101 aa3.64□□□□□ -1.83
KDM3A-210ENST00000470160 A0A1B0GU69 56 aa3.64□□□□□ -1.83
KDM3A-210ENST00000470160 UQCR11O14957 56 aa3.63□□□□□ -1.83
KDM3A-210ENST00000470160 LRP2P98164 4655 aa3.58□□□□□ -1.84
KDM3A-210ENST00000470160 PCLOQ9Y6V0 5065 aa3.57□□□□□ -1.84
KDM3A-210ENST00000470160 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
KDM3A-210ENST00000470160 LPAP08519 4548 aa3.56□□□□□ -1.84
KDM3A-210ENST00000470160 CAMK2N1Q7Z7J9 78 aa3.56□□□□□ -1.84
KDM3A-210ENST00000470160 H1FX-AS1Q4G0G2 97 aa3.53□□□□□ -1.84
KDM3A-210ENST00000470160 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.84
KDM3A-210ENST00000470160 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
KDM3A-210ENST00000470160 HERC1Q15751 4861 aa3.51□□□□□ -1.85
KDM3A-210ENST00000470160 KRTAP4-1Q9BYQ7 146 aa3.5□□□□□ -1.85
KDM3A-210ENST00000470160 S4R3F8 94 aa3.48□□□□□ -1.85
KDM3A-210ENST00000470160 H0YAA0 97 aa3.46□□□□□ -1.86
KDM3A-210ENST00000470160 KRTAP23-1A1A580 65 aa3.43□□□□□ -1.86
KDM3A-210ENST00000470160 KRTAP10-6P60371 365 aaPredicted RBP3.42□□□□□ -1.86
KDM3A-210ENST00000470160 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
KDM3A-210ENST00000470160 A0A1B0GU33 70 aa3.37□□□□□ -1.87
KDM3A-210ENST00000470160 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
KDM3A-210ENST00000470160 M0QZ58 72 aa3.32□□□□□ -1.88
KDM3A-210ENST00000470160 R4GN34 69 aa3.32□□□□□ -1.88
KDM3A-210ENST00000470160 KRTAP4-8Q9BYQ9 185 aa3.31□□□□□ -1.88
KDM3A-210ENST00000470160 RNF213Q63HN8 5207 aa3.3□□□□□ -1.88
KDM3A-210ENST00000470160 KRTAP13-4Q3LI77 160 aa3.29□□□□□ -1.88
KDM3A-210ENST00000470160 MT1HP80294 61 aa3.26□□□□□ -1.89
KDM3A-210ENST00000470160 PRO2289Q9P1D8 64 aa3.25□□□□□ -1.89
KDM3A-210ENST00000470160 MUC2Q02817 5179 aa3.23□□□□□ -1.89
KDM3A-210ENST00000470160 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
KDM3A-210ENST00000470160 FAT4Q6V0I7 4981 aa3.2□□□□□ -1.9
KDM3A-210ENST00000470160 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
KDM3A-210ENST00000470160 KRTAP9-8Q9BYQ0 159 aa3.18□□□□□ -1.9
KDM3A-210ENST00000470160 SPRR2GQ9BYE4 73 aa3.18□□□□□ -1.9
KDM3A-210ENST00000470160 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
KDM3A-210ENST00000470160 KRTAP12-2P59991 146 aa3.15□□□□□ -1.91
KDM3A-210ENST00000470160 PLAC4Q8WY50 150 aa3.15□□□□□ -1.91
KDM3A-210ENST00000470160 MT2AP02795 61 aa3.15□□□□□ -1.91
KDM3A-210ENST00000470160 KRTAP4-7Q9BYR0 210 aa3.14□□□□□ -1.91
KDM3A-210ENST00000470160 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
KDM3A-210ENST00000470160 A0A0D9SG42 100 aa3.12□□□□□ -1.91
KDM3A-210ENST00000470160 KRTAP19-1Q8IUB9 90 aa3.12□□□□□ -1.91
KDM3A-210ENST00000470160 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
KDM3A-210ENST00000470160 MT1FP04733 61 aa3.11□□□□□ -1.91
KDM3A-210ENST00000470160 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
KDM3A-210ENST00000470160 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
KDM3A-210ENST00000470160 M0R2T5 61 aa3.09□□□□□ -1.91
KDM3A-210ENST00000470160 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
KDM3A-210ENST00000470160 KRTAP9-3Q9BYQ3 159 aa3.07□□□□□ -1.92
KDM3A-210ENST00000470160 LCE3BQ5TA77 95 aa3.05□□□□□ -1.92
KDM3A-210ENST00000470160 KRTAP10-10P60014 251 aa3.05□□□□□ -1.92
KDM3A-210ENST00000470160 MT1BP07438 61 aa3□□□□□ -1.93
KDM3A-210ENST00000470160 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
KDM3A-210ENST00000470160 INE1O15225 51 aa2.97□□□□□ -1.93
KDM3A-210ENST00000470160 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
KDM3A-210ENST00000470160 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
KDM3A-210ENST00000470160 KRTAP4-9Q9BYQ8 210 aa2.95□□□□□ -1.94
KDM3A-210ENST00000470160 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
KDM3A-210ENST00000470160 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
KDM3A-210ENST00000470160 PP632Q6XCG6 107 aa2.91□□□□□ -1.94
KDM3A-210ENST00000470160 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
KDM3A-210ENST00000470160 MT1XP80297 61 aa2.91□□□□□ -1.94
KDM3A-210ENST00000470160 TNP1P09430 55 aa2.89□□□□□ -1.95
KDM3A-210ENST00000470160 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
KDM3A-210ENST00000470160 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
KDM3A-210ENST00000470160 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
KDM3A-210ENST00000470160 USH2AO75445 5202 aa2.8□□□□□ -1.96
KDM3A-210ENST00000470160 KRTAP8-1Q8IUC2 63 aa2.79□□□□□ -1.96
KDM3A-210ENST00000470160 KRTAP9-7A8MTY7 169 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms