RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 LAMA5O15230 3695 aa2.8□□□□□ -1.96
CCDC144A-212ENST00000470068 WDFY3Q8IZQ1 3526 aa2.79□□□□□ -1.96
CCDC144A-212ENST00000470068 PCLOQ9Y6V0 5065 aa2.79□□□□□ -1.96
CCDC144A-212ENST00000470068 EPPK1P58107 5090 aaKnown RBP2.78□□□□□ -1.96
CCDC144A-212ENST00000470068 HYDINQ4G0P3 5121 aa2.76□□□□□ -1.97
CCDC144A-212ENST00000470068 DMDP11532 3685 aa2.75□□□□□ -1.97
CCDC144A-212ENST00000470068 RYR3Q15413 4870 aa2.75□□□□□ -1.97
CCDC144A-212ENST00000470068 KRTAP10-12P60413 245 aa2.73□□□□□ -1.97
CCDC144A-212ENST00000470068 KRTAP8-1Q8IUC2 63 aa2.73□□□□□ -1.97
CCDC144A-212ENST00000470068 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
CCDC144A-212ENST00000470068 HUWE1Q7Z6Z7 4374 aaKnown RBP2.7□□□□□ -1.98
CCDC144A-212ENST00000470068 KRTAP10-4P60372 401 aaPredicted RBP2.7□□□□□ -1.98
CCDC144A-212ENST00000470068 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
CCDC144A-212ENST00000470068 KIAA1109Q2LD37 5005 aa2.7□□□□□ -1.98
CCDC144A-212ENST00000470068 SPRR2EP22531 72 aa2.69□□□□□ -1.98
CCDC144A-212ENST00000470068 SPRR2BP35325 72 aa2.69□□□□□ -1.98
CCDC144A-212ENST00000470068 SPRR2AP35326 72 aa2.69□□□□□ -1.98
CCDC144A-212ENST00000470068 FSIP2Q5CZC0 6907 aa2.67□□□□□ -1.98
CCDC144A-212ENST00000470068 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
CCDC144A-212ENST00000470068 UBR4Q5T4S7 5183 aa2.67□□□□□ -1.98
CCDC144A-212ENST00000470068 TRRAPQ9Y4A5 3859 aa2.66□□□□□ -1.98
CCDC144A-212ENST00000470068 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
CCDC144A-212ENST00000470068 PLECQ15149 4684 aaKnown RBP2.66□□□□□ -1.98
CCDC144A-212ENST00000470068 SVEP1Q4LDE5 3571 aa2.64□□□□□ -1.99
CCDC144A-212ENST00000470068 MYCBP2O75592 4640 aa2.62□□□□□ -1.99
CCDC144A-212ENST00000470068 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
CCDC144A-212ENST00000470068 SPRR2DP22532 72 aa2.61□□□□□ -1.99
CCDC144A-212ENST00000470068 RYR2Q92736 4967 aa2.61□□□□□ -1.99
CCDC144A-212ENST00000470068 MT1HP80294 61 aa2.61□□□□□ -1.99
CCDC144A-212ENST00000470068 ANK3Q12955 4377 aaKnown RBP2.61□□□□□ -1.99
CCDC144A-212ENST00000470068 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
CCDC144A-212ENST00000470068 SPENQ96T58 3664 aaKnown RBP2.58□□□□□ -2
CCDC144A-212ENST00000470068 DNAH11Q96DT5 4516 aa2.57□□□□□ -2
CCDC144A-212ENST00000470068 SPRR2GQ9BYE4 73 aa2.57□□□□□ -2
CCDC144A-212ENST00000470068 DNAH2Q9P225 4427 aa2.55□□□□□ -2
CCDC144A-212ENST00000470068 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.55□□□□□ -2
CCDC144A-212ENST00000470068 KRTAP19-1Q8IUB9 90 aa2.53□□□□□ -2
CCDC144A-212ENST00000470068 ALMS1Q8TCU4 4167 aa2.53□□□□□ -2.01
CCDC144A-212ENST00000470068 DNAH5Q8TE73 4624 aa2.51□□□□□ -2.01
CCDC144A-212ENST00000470068 ABCA13Q86UQ4 5058 aa2.51□□□□□ -2.01
CCDC144A-212ENST00000470068 AKAP9Q99996 3911 aa2.51□□□□□ -2.01
CCDC144A-212ENST00000470068 DNAH1Q9P2D7 4330 aa2.5□□□□□ -2.01
CCDC144A-212ENST00000470068 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
CCDC144A-212ENST00000470068 KRTAP10-7P60409 375 aaPredicted RBP2.48□□□□□ -2.01
CCDC144A-212ENST00000470068 LOC100996750A0A140TA64 210 aa2.47□□□□□ -2.01
CCDC144A-212ENST00000470068 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
CCDC144A-212ENST00000470068 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
CCDC144A-212ENST00000470068 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
CCDC144A-212ENST00000470068 MT2AP02795 61 aa2.45□□□□□ -2.02
CCDC144A-212ENST00000470068 KRTAP19-8Q3LI54 63 aa2.44□□□□□ -2.02
CCDC144A-212ENST00000470068 HERC1Q15751 4861 aa2.42□□□□□ -2.02
CCDC144A-212ENST00000470068 DNAH10Q8IVF4 4471 aa2.42□□□□□ -2.02
CCDC144A-212ENST00000470068 KRTAP4-1Q9BYQ7 146 aa2.41□□□□□ -2.02
CCDC144A-212ENST00000470068 HSPG2P98160 4391 aa2.4□□□□□ -2.02
CCDC144A-212ENST00000470068 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
CCDC144A-212ENST00000470068 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
CCDC144A-212ENST00000470068 PRKDCP78527 4128 aaKnown RBP2.38□□□□□ -2.03
CCDC144A-212ENST00000470068 DNAH9Q9NYC9 4486 aa2.38□□□□□ -2.03
CCDC144A-212ENST00000470068 LCE3CQ5T5A8 94 aa2.36□□□□□ -2.03
CCDC144A-212ENST00000470068 MT1FP04733 61 aa2.36□□□□□ -2.03
CCDC144A-212ENST00000470068 LCE3BQ5TA77 95 aa2.35□□□□□ -2.03
CCDC144A-212ENST00000470068 MT4P47944 62 aa2.34□□□□□ -2.03
CCDC144A-212ENST00000470068 RNF213Q63HN8 5207 aa2.34□□□□□ -2.03
CCDC144A-212ENST00000470068 KRTAP2-2Q9BYT5 123 aa2.34□□□□□ -2.03
CCDC144A-212ENST00000470068 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
CCDC144A-212ENST00000470068 FAT1Q14517 4588 aa2.34□□□□□ -2.03
CCDC144A-212ENST00000470068 KMT2CQ8NEZ4 4911 aaKnown RBP2.34□□□□□ -2.04
CCDC144A-212ENST00000470068 NEBP20929 6669 aa2.33□□□□□ -2.04
CCDC144A-212ENST00000470068 CUBNO60494 3623 aa2.33□□□□□ -2.04
CCDC144A-212ENST00000470068 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
CCDC144A-212ENST00000470068 BSNQ9UPA5 3926 aa2.32□□□□□ -2.04
CCDC144A-212ENST00000470068 FAT2Q9NYQ8 4349 aa2.32□□□□□ -2.04
CCDC144A-212ENST00000470068 DNAH6Q9C0G6 4158 aa2.32□□□□□ -2.04
CCDC144A-212ENST00000470068 LRP1BQ9NZR2 4599 aa2.3□□□□□ -2.04
CCDC144A-212ENST00000470068 LRP2P98164 4655 aa2.3□□□□□ -2.04
CCDC144A-212ENST00000470068 SACSQ9NZJ4 4579 aa2.3□□□□□ -2.04
CCDC144A-212ENST00000470068 VPS13CQ709C8 3753 aa2.3□□□□□ -2.04
CCDC144A-212ENST00000470068 KRTAP10-5P60370 271 aa2.28□□□□□ -2.04
CCDC144A-212ENST00000470068 APOBP04114 4563 aaKnown RBP2.27□□□□□ -2.05
CCDC144A-212ENST00000470068 DYNC2H1Q8NCM8 4307 aaKnown RBP2.27□□□□□ -2.05
CCDC144A-212ENST00000470068 MUC2Q02817 5179 aa2.26□□□□□ -2.05
CCDC144A-212ENST00000470068 KRTAP19-6Q3LI70 58 aa2.26□□□□□ -2.05
CCDC144A-212ENST00000470068 KMT2DO14686 5537 aa2.25□□□□□ -2.05
CCDC144A-212ENST00000470068 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
CCDC144A-212ENST00000470068 MT1GP13640 62 aa2.25□□□□□ -2.05
CCDC144A-212ENST00000470068 VPS13DQ5THJ4 4388 aa2.24□□□□□ -2.05
CCDC144A-212ENST00000470068 DNAH17Q9UFH2 4485 aa2.23□□□□□ -2.05
CCDC144A-212ENST00000470068 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
CCDC144A-212ENST00000470068 LRP1Q07954 4544 aaKnown RBP2.22□□□□□ -2.05
CCDC144A-212ENST00000470068 KRTAP4-8Q9BYQ9 185 aa2.21□□□□□ -2.05
CCDC144A-212ENST00000470068 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
CCDC144A-212ENST00000470068 DNAH3Q8TD57 4116 aa2.21□□□□□ -2.06
CCDC144A-212ENST00000470068 ZNF469Q96JG9 3925 aaPredicted RBP2.21□□□□□ -2.06
CCDC144A-212ENST00000470068 ANK2Q01484 3957 aa2.2□□□□□ -2.06
CCDC144A-212ENST00000470068 PKHD1L1Q86WI1 4243 aa2.2□□□□□ -2.06
CCDC144A-212ENST00000470068 FAT3Q8TDW7 4589 aa2.19□□□□□ -2.06
CCDC144A-212ENST00000470068 LCE4AQ5TA78 99 aa2.19□□□□□ -2.06
CCDC144A-212ENST00000470068 FRAS1Q86XX4 4008 aa2.19□□□□□ -2.06
CCDC144A-212ENST00000470068 KRTAP4-9Q9BYQ8 210 aa2.18□□□□□ -2.06
CCDC144A-212ENST00000470068 DNAH8Q96JB1 4490 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms