RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 LCE2BO14633 110 aa5.23□□□□□ -1.57
TOP3A-203ENST00000469739 KRTAP17-1Q9BYP8 105 aa5.22□□□□□ -1.57
TOP3A-203ENST00000469739 BIRC6Q9NR09 4857 aa5.21□□□□□ -1.58
TOP3A-203ENST00000469739 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
TOP3A-203ENST00000469739 PKHD1L1Q86WI1 4243 aa5.2□□□□□ -1.58
TOP3A-203ENST00000469739 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
TOP3A-203ENST00000469739 KRTAP10-4P60372 401 aaPredicted RBP5.18□□□□□ -1.58
TOP3A-203ENST00000469739 HSPG2P98160 4391 aa5.17□□□□□ -1.58
TOP3A-203ENST00000469739 ROMO1P60602 79 aa5.17□□□□□ -1.58
TOP3A-203ENST00000469739 EPPK1P58107 5090 aaKnown RBP5.15□□□□□ -1.59
TOP3A-203ENST00000469739 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
TOP3A-203ENST00000469739 Q5VSD8 79 aa5.14□□□□□ -1.59
TOP3A-203ENST00000469739 RYR1P21817 5038 aa5.13□□□□□ -1.59
TOP3A-203ENST00000469739 RPS29P62273 56 aaKnown RBP5.11□□□□□ -1.59
TOP3A-203ENST00000469739 A8MUU9 505 aa5.08□□□□□ -1.6
TOP3A-203ENST00000469739 TNXBP22105 4242 aa5.07□□□□□ -1.6
TOP3A-203ENST00000469739 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
TOP3A-203ENST00000469739 K7ERS5 55 aa5.05□□□□□ -1.6
TOP3A-203ENST00000469739 LPAP08519 4548 aa5.03□□□□□ -1.6
TOP3A-203ENST00000469739 H0YAA0 97 aa5.03□□□□□ -1.6
TOP3A-203ENST00000469739 P0C880 135 aa5.02□□□□□ -1.61
TOP3A-203ENST00000469739 LRP2P98164 4655 aa5.02□□□□□ -1.61
TOP3A-203ENST00000469739 C20orf166-AS1Q96NR2 134 aa5.02□□□□□ -1.61
TOP3A-203ENST00000469739 ABCA13Q86UQ4 5058 aa5□□□□□ -1.61
TOP3A-203ENST00000469739 KRTAP3-1Q9BYR8 98 aa5□□□□□ -1.61
TOP3A-203ENST00000469739 CRIPTQ9P021 101 aa4.99□□□□□ -1.61
TOP3A-203ENST00000469739 KRTAP10-8P60410 259 aa4.98□□□□□ -1.61
TOP3A-203ENST00000469739 A0A1B0GU33 70 aa4.95□□□□□ -1.62
TOP3A-203ENST00000469739 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
TOP3A-203ENST00000469739 HERC2O95714 4834 aa4.92□□□□□ -1.62
TOP3A-203ENST00000469739 XP32Q5T750 250 aa4.92□□□□□ -1.62
TOP3A-203ENST00000469739 MT1HL1P0DM35 61 aa4.9□□□□□ -1.62
TOP3A-203ENST00000469739 H1FX-AS1Q4G0G2 97 aa4.9□□□□□ -1.62
TOP3A-203ENST00000469739 SPINT4Q6UDR6 99 aa4.89□□□□□ -1.63
TOP3A-203ENST00000469739 PCLOQ9Y6V0 5065 aa4.89□□□□□ -1.63
TOP3A-203ENST00000469739 COX6B2Q6YFQ2 88 aa4.88□□□□□ -1.63
TOP3A-203ENST00000469739 RPL37P61927 97 aaKnown RBP4.87□□□□□ -1.63
TOP3A-203ENST00000469739 MUC2Q02817 5179 aa4.84□□□□□ -1.64
TOP3A-203ENST00000469739 A0A0D9SG42 100 aa4.79□□□□□ -1.64
TOP3A-203ENST00000469739 TPRXLQ17RH7 258 aa4.79□□□□□ -1.64
TOP3A-203ENST00000469739 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
TOP3A-203ENST00000469739 CAMK2N1Q7Z7J9 78 aa4.77□□□□□ -1.65
TOP3A-203ENST00000469739 S4R3F8 94 aa4.76□□□□□ -1.65
TOP3A-203ENST00000469739 LORP23490 312 aaPredicted RBP4.75□□□□□ -1.65
TOP3A-203ENST00000469739 HERC1Q15751 4861 aa4.73□□□□□ -1.65
TOP3A-203ENST00000469739 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
TOP3A-203ENST00000469739 KRTAP13-4Q3LI77 160 aa4.7□□□□□ -1.66
TOP3A-203ENST00000469739 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
TOP3A-203ENST00000469739 KRTAP4-1Q9BYQ7 146 aa4.62□□□□□ -1.67
TOP3A-203ENST00000469739 FAT4Q6V0I7 4981 aa4.61□□□□□ -1.67
TOP3A-203ENST00000469739 RNF213Q63HN8 5207 aa4.59□□□□□ -1.68
TOP3A-203ENST00000469739 MUC17Q685J3 4493 aa4.58□□□□□ -1.68
TOP3A-203ENST00000469739 R4GN34 69 aa4.54□□□□□ -1.68
TOP3A-203ENST00000469739 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
TOP3A-203ENST00000469739 M0QZ58 72 aa4.51□□□□□ -1.69
TOP3A-203ENST00000469739 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
TOP3A-203ENST00000469739 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
TOP3A-203ENST00000469739 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
TOP3A-203ENST00000469739 PLAC4Q8WY50 150 aa4.4□□□□□ -1.71
TOP3A-203ENST00000469739 KRTAP19-2Q3LHN2 52 aa4.37□□□□□ -1.71
TOP3A-203ENST00000469739 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.71
TOP3A-203ENST00000469739 M0R2T5 61 aa4.31□□□□□ -1.72
TOP3A-203ENST00000469739 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
TOP3A-203ENST00000469739 KRTAP9-2Q9BYQ4 174 aa4.18□□□□□ -1.74
TOP3A-203ENST00000469739 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
TOP3A-203ENST00000469739 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
TOP3A-203ENST00000469739 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
TOP3A-203ENST00000469739 MT1HP80294 61 aa4.12□□□□□ -1.75
TOP3A-203ENST00000469739 USH2AO75445 5202 aa4.09□□□□□ -1.75
TOP3A-203ENST00000469739 MT1FP04733 61 aa4.06□□□□□ -1.76
TOP3A-203ENST00000469739 KRTAP19-1Q8IUB9 90 aa4.05□□□□□ -1.76
TOP3A-203ENST00000469739 MT2AP02795 61 aa4.04□□□□□ -1.76
TOP3A-203ENST00000469739 FSIP2Q5CZC0 6907 aa3.99□□□□□ -1.77
TOP3A-203ENST00000469739 TNP1P09430 55 aa3.99□□□□□ -1.77
TOP3A-203ENST00000469739 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
TOP3A-203ENST00000469739 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
TOP3A-203ENST00000469739 SPRR2GQ9BYE4 73 aa3.97□□□□□ -1.77
TOP3A-203ENST00000469739 KMT2DO14686 5537 aa3.92□□□□□ -1.78
TOP3A-203ENST00000469739 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
TOP3A-203ENST00000469739 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
TOP3A-203ENST00000469739 MT1BP07438 61 aa3.85□□□□□ -1.79
TOP3A-203ENST00000469739 INE1O15225 51 aa3.84□□□□□ -1.79
TOP3A-203ENST00000469739 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
TOP3A-203ENST00000469739 KRTAP9-3Q9BYQ3 159 aa3.81□□□□□ -1.8
TOP3A-203ENST00000469739 MT1XP80297 61 aa3.8□□□□□ -1.8
TOP3A-203ENST00000469739 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
TOP3A-203ENST00000469739 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
TOP3A-203ENST00000469739 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
TOP3A-203ENST00000469739 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
TOP3A-203ENST00000469739 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
TOP3A-203ENST00000469739 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
TOP3A-203ENST00000469739 KRTAP10-12P60413 245 aa3.71□□□□□ -1.82
TOP3A-203ENST00000469739 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
TOP3A-203ENST00000469739 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.83
TOP3A-203ENST00000469739 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.83
TOP3A-203ENST00000469739 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
TOP3A-203ENST00000469739 SSPOA2VEC9 5147 aa3.64□□□□□ -1.83
TOP3A-203ENST00000469739 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
TOP3A-203ENST00000469739 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
TOP3A-203ENST00000469739 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 554.2 ms