RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 HCG22E2RYF7 251 aa3.22□□□□□ -1.89
PTCD3-208ENST00000469585 WFDC13Q8IUB5 93 aa3.22□□□□□ -1.89
PTCD3-208ENST00000469585 LINC00846Q9NV44 126 aa3.22□□□□□ -1.89
PTCD3-208ENST00000469585 FAM240AA0A1B0GVK7 77 aa3.21□□□□□ -1.9
PTCD3-208ENST00000469585 LPAP08519 4548 aa3.2□□□□□ -1.9
PTCD3-208ENST00000469585 MMP24-AS1A0A0U1RRL7 71 aa3.2□□□□□ -1.9
PTCD3-208ENST00000469585 HIST1H4AP62805 103 aaKnown RBP3.2□□□□□ -1.9
PTCD3-208ENST00000469585 TP53AIP1Q9HCN2 124 aa3.2□□□□□ -1.9
PTCD3-208ENST00000469585 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
PTCD3-208ENST00000469585 SPINK7P58062 85 aa3.18□□□□□ -1.9
PTCD3-208ENST00000469585 C7orf65Q6ZTY9 151 aa3.18□□□□□ -1.9
PTCD3-208ENST00000469585 UBR4Q5T4S7 5183 aa3.18□□□□□ -1.9
PTCD3-208ENST00000469585 KRTAP4-1Q9BYQ7 146 aa3.17□□□□□ -1.9
PTCD3-208ENST00000469585 LINC00643Q86TS7 51 aa3.16□□□□□ -1.9
PTCD3-208ENST00000469585 K7ERU9 68 aa3.14□□□□□ -1.91
PTCD3-208ENST00000469585 SCGB1A1P11684 91 aa3.14□□□□□ -1.91
PTCD3-208ENST00000469585 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
PTCD3-208ENST00000469585 ATOX1O00244 68 aa3.13□□□□□ -1.91
PTCD3-208ENST00000469585 TRAV22A0A0B4J277 110 aa3.12□□□□□ -1.91
PTCD3-208ENST00000469585 UQCRQO14949 82 aa3.11□□□□□ -1.91
PTCD3-208ENST00000469585 MP68P56378 58 aa3.11□□□□□ -1.91
PTCD3-208ENST00000469585 MT1HP80294 61 aa3.1□□□□□ -1.91
PTCD3-208ENST00000469585 Q5W150 140 aa3.1□□□□□ -1.91
PTCD3-208ENST00000469585 RNF213Q63HN8 5207 aa3.09□□□□□ -1.91
PTCD3-208ENST00000469585 LOC101927531A0A1B0GV80 90 aa3.09□□□□□ -1.91
PTCD3-208ENST00000469585 HRES1P13985 223 aa3.09□□□□□ -1.91
PTCD3-208ENST00000469585 H1FX-AS1Q4G0G2 97 aa3.08□□□□□ -1.92
PTCD3-208ENST00000469585 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
PTCD3-208ENST00000469585 H0Y9P7 68 aa3.07□□□□□ -1.92
PTCD3-208ENST00000469585 MUC2Q02817 5179 aa3.06□□□□□ -1.92
PTCD3-208ENST00000469585 SMIM20Q8N5G0 67 aa3.06□□□□□ -1.92
PTCD3-208ENST00000469585 C4orf26Q17RF5 130 aa3.05□□□□□ -1.92
PTCD3-208ENST00000469585 KRTAP19-2Q3LHN2 52 aa3.05□□□□□ -1.92
PTCD3-208ENST00000469585 C5orf47Q569G3 176 aa3.05□□□□□ -1.92
PTCD3-208ENST00000469585 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
PTCD3-208ENST00000469585 IMUPQ9GZP8 106 aa3.05□□□□□ -1.92
PTCD3-208ENST00000469585 A0A087WVE0 104 aa3.04□□□□□ -1.92
PTCD3-208ENST00000469585 H3BPC8 53 aa3.04□□□□□ -1.92
PTCD3-208ENST00000469585 C1orf64Q8NEQ6 169 aa3.04□□□□□ -1.92
PTCD3-208ENST00000469585 MUC17Q685J3 4493 aa3.03□□□□□ -1.92
PTCD3-208ENST00000469585 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
PTCD3-208ENST00000469585 LINC00208Q96KT6 92 aa3.03□□□□□ -1.92
PTCD3-208ENST00000469585 S4R3F8 94 aa3.03□□□□□ -1.92
PTCD3-208ENST00000469585 CYP4F30PQ9H0H9 118 aa3.02□□□□□ -1.93
PTCD3-208ENST00000469585 FAM236AA0A1B0GUQ0 79 aa3.01□□□□□ -1.93
PTCD3-208ENST00000469585 FAM236BA0A1B0GV22 79 aa3.01□□□□□ -1.93
PTCD3-208ENST00000469585 A8MUN3 132 aa3.01□□□□□ -1.93
PTCD3-208ENST00000469585 CSAG1Q6PB30 78 aa3.01□□□□□ -1.93
PTCD3-208ENST00000469585 KRTAP10-10P60014 251 aa3□□□□□ -1.93
PTCD3-208ENST00000469585 NDUFC1O43677 76 aa2.99□□□□□ -1.93
PTCD3-208ENST00000469585 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-208ENST00000469585 TRAV7A0A075B6U4 112 aa2.96□□□□□ -1.94
PTCD3-208ENST00000469585 MT-ATP8P03928 68 aa2.96□□□□□ -1.94
PTCD3-208ENST00000469585 SPTSSBQ8NFR3 76 aa2.96□□□□□ -1.94
PTCD3-208ENST00000469585 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
PTCD3-208ENST00000469585 CHKB-CPT1BH3BT56 60 aa2.93□□□□□ -1.94
PTCD3-208ENST00000469585 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
PTCD3-208ENST00000469585 LCA10Q71F78 164 aa2.93□□□□□ -1.94
PTCD3-208ENST00000469585 C20orf197Q8N268 126 aa2.93□□□□□ -1.94
PTCD3-208ENST00000469585 V9GYY9 64 aa2.93□□□□□ -1.94
PTCD3-208ENST00000469585 ACYP2P14621 99 aa2.92□□□□□ -1.94
PTCD3-208ENST00000469585 SERP2Q8N6R1 65 aa2.91□□□□□ -1.94
PTCD3-208ENST00000469585 MT2AP02795 61 aa2.9□□□□□ -1.95
PTCD3-208ENST00000469585 KLKP1Q107X0 134 aa2.9□□□□□ -1.95
PTCD3-208ENST00000469585 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
PTCD3-208ENST00000469585 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
PTCD3-208ENST00000469585 DMAC1Q96GE9 116 aa2.88□□□□□ -1.95
PTCD3-208ENST00000469585 CRIPTQ9P021 101 aa2.88□□□□□ -1.95
PTCD3-208ENST00000469585 FLGP20930 4061 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-208ENST00000469585 MT1FP04733 61 aa2.87□□□□□ -1.95
PTCD3-208ENST00000469585 SNURFQ9Y675 71 aa2.87□□□□□ -1.95
PTCD3-208ENST00000469585 H0YAA0 97 aa2.85□□□□□ -1.95
PTCD3-208ENST00000469585 SPANXA2-OT1Q8N9U9 137 aa2.85□□□□□ -1.95
PTCD3-208ENST00000469585 ANAPC13Q9BS18 74 aa2.85□□□□□ -1.95
PTCD3-208ENST00000469585 ADM2Q7Z4H4 148 aa2.84□□□□□ -1.95
PTCD3-208ENST00000469585 COX7CP15954 63 aa2.83□□□□□ -1.96
PTCD3-208ENST00000469585 R4GN34 69 aa2.83□□□□□ -1.96
PTCD3-208ENST00000469585 Q5VV11 94 aa2.82□□□□□ -1.96
PTCD3-208ENST00000469585 SMIM26A0A096LP01 95 aa2.8□□□□□ -1.96
PTCD3-208ENST00000469585 PSPHP1O15172 72 aa2.8□□□□□ -1.96
PTCD3-208ENST00000469585 SERP1Q9Y6X1 66 aa2.79□□□□□ -1.96
PTCD3-208ENST00000469585 CCDC179H3BU77 68 aa2.78□□□□□ -1.96
PTCD3-208ENST00000469585 PLAC4Q8WY50 150 aa2.78□□□□□ -1.96
PTCD3-208ENST00000469585 M0QZ58 72 aa2.77□□□□□ -1.97
PTCD3-208ENST00000469585 RPS28P62857 69 aaKnown RBP2.77□□□□□ -1.97
PTCD3-208ENST00000469585 ATP5EP56381 51 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-208ENST00000469585 LINC01554Q52M75 96 aa2.75□□□□□ -1.97
PTCD3-208ENST00000469585 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
PTCD3-208ENST00000469585 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
PTCD3-208ENST00000469585 COA5Q86WW8 74 aa2.75□□□□□ -1.97
PTCD3-208ENST00000469585 SPRR2GQ9BYE4 73 aa2.75□□□□□ -1.97
PTCD3-208ENST00000469585 PRO2289Q9P1D8 64 aa2.75□□□□□ -1.97
PTCD3-208ENST00000469585 A6NN06 94 aa2.74□□□□□ -1.97
PTCD3-208ENST00000469585 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
PTCD3-208ENST00000469585 H7BZZ5 65 aa2.71□□□□□ -1.98
PTCD3-208ENST00000469585 KRTAP19-6Q3LI70 58 aa2.71□□□□□ -1.98
PTCD3-208ENST00000469585 PRR15LQ9BU68 103 aa2.71□□□□□ -1.98
PTCD3-208ENST00000469585 P0C880 135 aa2.7□□□□□ -1.98
PTCD3-208ENST00000469585 FSIP2Q5CZC0 6907 aa2.7□□□□□ -1.98
PTCD3-208ENST00000469585 A0A1B0GU69 56 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms