RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 F8WEM9 126 aa1.55□□□□□ -2.16
GPNMB-207ENST00000468723 SPRR1BP22528 89 aa1.55□□□□□ -2.16
GPNMB-207ENST00000468723 COX6B2Q6YFQ2 88 aa1.55□□□□□ -2.16
GPNMB-207ENST00000468723 Q6ZQY7 126 aa1.55□□□□□ -2.16
GPNMB-207ENST00000468723 OBSCN-AS1Q96MR7 158 aa1.55□□□□□ -2.16
GPNMB-207ENST00000468723 LIMD2Q9BT23 127 aa1.55□□□□□ -2.16
GPNMB-207ENST00000468723 FLGP20930 4061 aaPredicted RBP1.55□□□□□ -2.16
GPNMB-207ENST00000468723 TRAV13-2A0A0B4J235 113 aa1.54□□□□□ -2.16
GPNMB-207ENST00000468723 hADV29S1A0JD25 119 aa1.54□□□□□ -2.16
GPNMB-207ENST00000468723 TRACP01848 142 aa1.54□□□□□ -2.16
GPNMB-207ENST00000468723 IFITM1P13164 125 aa1.54□□□□□ -2.16
GPNMB-207ENST00000468723 MT1HP80294 61 aa1.54□□□□□ -2.16
GPNMB-207ENST00000468723 KRTAP19-2Q3LHN2 52 aa1.54□□□□□ -2.16
GPNMB-207ENST00000468723 LINC00575Q6W349 94 aa1.54□□□□□ -2.16
GPNMB-207ENST00000468723 Q96NJ1 140 aa1.54□□□□□ -2.16
GPNMB-207ENST00000468723 SNHG12Q9BXW3 62 aa1.54□□□□□ -2.16
GPNMB-207ENST00000468723 RPL37P61927 97 aaKnown RBP1.53□□□□□ -2.16
GPNMB-207ENST00000468723 RPS29P62273 56 aaKnown RBP1.53□□□□□ -2.16
GPNMB-207ENST00000468723 SPATA45Q537H7 98 aa1.53□□□□□ -2.16
GPNMB-207ENST00000468723 OCIAD2Q56VL3 154 aa1.53□□□□□ -2.16
GPNMB-207ENST00000468723 ORMDL1Q9P0S3 153 aa1.53□□□□□ -2.16
GPNMB-207ENST00000468723 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
GPNMB-207ENST00000468723 IGLV5-48A0A075B6I7 105 aa1.52□□□□□ -2.17
GPNMB-207ENST00000468723 IGKV3D-7A0A0C4DH55 119 aa1.52□□□□□ -2.17
GPNMB-207ENST00000468723 TRBV7-7A0A0K0K1E9 115 aa1.52□□□□□ -2.17
GPNMB-207ENST00000468723 F8W1H4 67 aa1.52□□□□□ -2.17
GPNMB-207ENST00000468723 UQCRQO14949 82 aa1.52□□□□□ -2.17
GPNMB-207ENST00000468723 COX8AP10176 69 aa1.52□□□□□ -2.17
GPNMB-207ENST00000468723 TEN1Q86WV5 123 aa1.52□□□□□ -2.17
GPNMB-207ENST00000468723 COPS9Q8WXC6 57 aa1.52□□□□□ -2.17
GPNMB-207ENST00000468723 VPS25Q9BRG1 176 aa1.52□□□□□ -2.17
GPNMB-207ENST00000468723 S100A1P23297 94 aa1.51□□□□□ -2.17
GPNMB-207ENST00000468723 MIR22HGQ0VDD5 57 aa1.51□□□□□ -2.17
GPNMB-207ENST00000468723 CASC2Q6XLA1 102 aa1.51□□□□□ -2.17
GPNMB-207ENST00000468723 ATP11AUNQ6ZP68 121 aa1.51□□□□□ -2.17
GPNMB-207ENST00000468723 VAMP8Q9BV40 100 aa1.51□□□□□ -2.17
GPNMB-207ENST00000468723 CRCT1Q9UGL9 99 aa1.51□□□□□ -2.17
GPNMB-207ENST00000468723 DNAL4O96015 105 aa1.5□□□□□ -2.17
GPNMB-207ENST00000468723 COX7CP15954 63 aa1.5□□□□□ -2.17
GPNMB-207ENST00000468723 BVES-AS1Q5T3Y7 98 aa1.5□□□□□ -2.17
GPNMB-207ENST00000468723 Q6JHZ5 121 aa1.5□□□□□ -2.17
GPNMB-207ENST00000468723 CYSTM1Q9H1C7 97 aa1.5□□□□□ -2.17
GPNMB-207ENST00000468723 USH2AO75445 5202 aa1.48□□□□□ -2.17
GPNMB-207ENST00000468723 PRO1854Q9UHT4 67 aa1.48□□□□□ -2.17
GPNMB-207ENST00000468723 FSIP2Q5CZC0 6907 aa1.47□□□□□ -2.17
GPNMB-207ENST00000468723 LOC110117498A0A087WWA1 95 aa1.47□□□□□ -2.17
GPNMB-207ENST00000468723 H0YGX0 51 aa1.47□□□□□ -2.17
GPNMB-207ENST00000468723 INE1O15225 51 aa1.47□□□□□ -2.17
GPNMB-207ENST00000468723 DLEU1O43261 78 aa1.47□□□□□ -2.17
GPNMB-207ENST00000468723 SNCGO76070 127 aa1.47□□□□□ -2.17
GPNMB-207ENST00000468723 PYY3Q5JQD4 70 aa1.47□□□□□ -2.17
GPNMB-207ENST00000468723 HIGD1BQ9P298 99 aa1.47□□□□□ -2.17
GPNMB-207ENST00000468723 TRBV20-1A0A075B6N2 111 aa1.46□□□□□ -2.18
GPNMB-207ENST00000468723 CCKP06307 115 aa1.46□□□□□ -2.18
GPNMB-207ENST00000468723 RBM3P98179 157 aaKnown RBP1.46□□□□□ -2.18
GPNMB-207ENST00000468723 HSD52Q0P140 79 aa1.46□□□□□ -2.18
GPNMB-207ENST00000468723 SSPOA2VEC9 5147 aa1.46□□□□□ -2.18
GPNMB-207ENST00000468723 PPDPFLQ8WWR9 84 aa1.45□□□□□ -2.18
GPNMB-207ENST00000468723 J3QR89 54 aa1.44□□□□□ -2.18
GPNMB-207ENST00000468723 K7ERU9 68 aa1.44□□□□□ -2.18
GPNMB-207ENST00000468723 MT2AP02795 61 aa1.44□□□□□ -2.18
GPNMB-207ENST00000468723 COX6CP09669 75 aa1.44□□□□□ -2.18
GPNMB-207ENST00000468723 LINC00472Q9H8W2 130 aa1.44□□□□□ -2.18
GPNMB-207ENST00000468723 UQCR10Q9UDW1 63 aa1.44□□□□□ -2.18
GPNMB-207ENST00000468723 TRBV7-4A0A0J9YYF1 115 aa1.43□□□□□ -2.18
GPNMB-207ENST00000468723 FAM236AA0A1B0GUQ0 79 aa1.43□□□□□ -2.18
GPNMB-207ENST00000468723 FAM236BA0A1B0GV22 79 aa1.43□□□□□ -2.18
GPNMB-207ENST00000468723 JMJD7-PLA2G4BH0Y9G9 81 aa1.43□□□□□ -2.18
GPNMB-207ENST00000468723 MT1FP04733 61 aa1.43□□□□□ -2.18
GPNMB-207ENST00000468723 DSCR8Q96T75 97 aa1.43□□□□□ -2.18
GPNMB-207ENST00000468723 A6NN06 94 aa1.42□□□□□ -2.18
GPNMB-207ENST00000468723 SPINK7P58062 85 aa1.42□□□□□ -2.18
GPNMB-207ENST00000468723 WFDC13Q8IUB5 93 aa1.42□□□□□ -2.18
GPNMB-207ENST00000468723 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
GPNMB-207ENST00000468723 ATXN8Q156A1 80 aa1.41□□□□□ -2.18
GPNMB-207ENST00000468723 NDUFB1O75438 58 aa1.4□□□□□ -2.19
GPNMB-207ENST00000468723 NREPQ16612 68 aa1.4□□□□□ -2.19
GPNMB-207ENST00000468723 MMP24-AS1A0A0U1RRL7 71 aa1.39□□□□□ -2.19
GPNMB-207ENST00000468723 K7EQZ3 153 aa1.39□□□□□ -2.19
GPNMB-207ENST00000468723 M0R143 59 aa1.39□□□□□ -2.19
GPNMB-207ENST00000468723 HCG22E2RYF7 251 aa1.38□□□□□ -2.19
GPNMB-207ENST00000468723 CSAG1Q6PB30 78 aa1.38□□□□□ -2.19
GPNMB-207ENST00000468723 MRPL34Q9BQ48 92 aaKnown RBP1.38□□□□□ -2.19
GPNMB-207ENST00000468723 SYNE2Q8WXH0 6885 aaKnown RBP1.38□□□□□ -2.19
GPNMB-207ENST00000468723 A0A1W2PPM0 123 aa1.36□□□□□ -2.19
GPNMB-207ENST00000468723 H1FX-AS1Q4G0G2 97 aa1.36□□□□□ -2.19
GPNMB-207ENST00000468723 SPCS1Q9Y6A9 102 aa1.36□□□□□ -2.19
GPNMB-207ENST00000468723 SMIM6P0DI80 62 aa1.35□□□□□ -2.19
GPNMB-207ENST00000468723 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
GPNMB-207ENST00000468723 A0A087WVE0 104 aa1.34□□□□□ -2.19
GPNMB-207ENST00000468723 K7EP34 96 aa1.34□□□□□ -2.19
GPNMB-207ENST00000468723 PDE6GP18545 87 aa1.34□□□□□ -2.19
GPNMB-207ENST00000468723 LINC00846Q9NV44 126 aa1.34□□□□□ -2.19
GPNMB-207ENST00000468723 S4R3F8 94 aa1.33□□□□□ -2.2
GPNMB-207ENST00000468723 KRTAP19-6Q3LI70 58 aa1.32□□□□□ -2.2
GPNMB-207ENST00000468723 DMAC1Q96GE9 116 aa1.31□□□□□ -2.2
GPNMB-207ENST00000468723 UBL5Q9BZL1 73 aa1.31□□□□□ -2.2
GPNMB-207ENST00000468723 MUC12Q9UKN1 5478 aa1.3□□□□□ -2.2
GPNMB-207ENST00000468723 A0A1B0GV90 55 aa1.3□□□□□ -2.2
GPNMB-207ENST00000468723 MT1BP07438 61 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms