RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 KRTAP25-1Q3LHN0 102 aa7.6□□□□□ -1.19
SEC16A-208ENST00000467838 FLG2Q5D862 2391 aaPredicted RBP7.58□□□□□ -1.2
SEC16A-208ENST00000467838 KRTAP17-1Q9BYP8 105 aa7.57□□□□□ -1.2
SEC16A-208ENST00000467838 FAT3Q8TDW7 4589 aa7.52□□□□□ -1.21
SEC16A-208ENST00000467838 K7ERS5 55 aa7.51□□□□□ -1.21
SEC16A-208ENST00000467838 TNXBP22105 4242 aa7.5□□□□□ -1.21
SEC16A-208ENST00000467838 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
SEC16A-208ENST00000467838 KRTAP10-6P60371 365 aaPredicted RBP7.49□□□□□ -1.21
SEC16A-208ENST00000467838 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
SEC16A-208ENST00000467838 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.22
SEC16A-208ENST00000467838 RPL37P61927 97 aaKnown RBP7.45□□□□□ -1.22
SEC16A-208ENST00000467838 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
SEC16A-208ENST00000467838 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
SEC16A-208ENST00000467838 BIRC6Q9NR09 4857 aa7.42□□□□□ -1.22
SEC16A-208ENST00000467838 ROMO1P60602 79 aa7.4□□□□□ -1.22
SEC16A-208ENST00000467838 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.22
SEC16A-208ENST00000467838 KRTAP4-5Q9BYR2 181 aa7.37□□□□□ -1.23
SEC16A-208ENST00000467838 XP32Q5T750 250 aa7.37□□□□□ -1.23
SEC16A-208ENST00000467838 S4R3F8 94 aa7.37□□□□□ -1.23
SEC16A-208ENST00000467838 MYCBP2O75592 4640 aa7.36□□□□□ -1.23
SEC16A-208ENST00000467838 DMBT1Q9UGM3 2413 aaPredicted RBP7.31□□□□□ -1.24
SEC16A-208ENST00000467838 HERC2O95714 4834 aa7.31□□□□□ -1.24
SEC16A-208ENST00000467838 MT1HL1P0DM35 61 aa7.31□□□□□ -1.24
SEC16A-208ENST00000467838 CRIPTQ9P021 101 aa7.29□□□□□ -1.24
SEC16A-208ENST00000467838 ABCA13Q86UQ4 5058 aa7.29□□□□□ -1.24
SEC16A-208ENST00000467838 A0A0D9SG42 100 aa7.26□□□□□ -1.25
SEC16A-208ENST00000467838 H3BS24 57 aa7.26□□□□□ -1.25
SEC16A-208ENST00000467838 P0C880 135 aa7.26□□□□□ -1.25
SEC16A-208ENST00000467838 TPRXLQ17RH7 258 aa7.21□□□□□ -1.26
SEC16A-208ENST00000467838 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
SEC16A-208ENST00000467838 J3QL48 77 aa7.13□□□□□ -1.27
SEC16A-208ENST00000467838 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
SEC16A-208ENST00000467838 M0QZ58 72 aa7.09□□□□□ -1.27
SEC16A-208ENST00000467838 C10orf95Q9H7T3 257 aa7.08□□□□□ -1.28
SEC16A-208ENST00000467838 PCLOQ9Y6V0 5065 aa7.06□□□□□ -1.28
SEC16A-208ENST00000467838 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
SEC16A-208ENST00000467838 LPAP08519 4548 aa6.98□□□□□ -1.29
SEC16A-208ENST00000467838 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
SEC16A-208ENST00000467838 LRP2P98164 4655 aa6.96□□□□□ -1.29
SEC16A-208ENST00000467838 HERC1Q15751 4861 aa6.87□□□□□ -1.31
SEC16A-208ENST00000467838 R4GN34 69 aa6.8□□□□□ -1.32
SEC16A-208ENST00000467838 HMCN2Q8NDA2 5059 aa6.79□□□□□ -1.32
SEC16A-208ENST00000467838 MUC17Q685J3 4493 aa6.77□□□□□ -1.33
SEC16A-208ENST00000467838 NDUFAF8A1L188 74 aa6.76□□□□□ -1.33
SEC16A-208ENST00000467838 SEC61BP60468 96 aaKnown RBP6.75□□□□□ -1.33
SEC16A-208ENST00000467838 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
SEC16A-208ENST00000467838 KRTAP4-1Q9BYQ7 146 aa6.66□□□□□ -1.34
SEC16A-208ENST00000467838 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
SEC16A-208ENST00000467838 PP632Q6XCG6 107 aa6.56□□□□□ -1.36
SEC16A-208ENST00000467838 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
SEC16A-208ENST00000467838 MUC2Q02817 5179 aa6.55□□□□□ -1.36
SEC16A-208ENST00000467838 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
SEC16A-208ENST00000467838 RNF213Q63HN8 5207 aa6.46□□□□□ -1.38
SEC16A-208ENST00000467838 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
SEC16A-208ENST00000467838 FLGP20930 4061 aaPredicted RBP6.45□□□□□ -1.38
SEC16A-208ENST00000467838 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
SEC16A-208ENST00000467838 TNP1P09430 55 aa6.29□□□□□ -1.4
SEC16A-208ENST00000467838 FAT4Q6V0I7 4981 aa6.28□□□□□ -1.4
SEC16A-208ENST00000467838 LCE2CQ5TA81 110 aa6.27□□□□□ -1.4
SEC16A-208ENST00000467838 LUZP6Q538Z0 58 aa6.27□□□□□ -1.41
SEC16A-208ENST00000467838 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
SEC16A-208ENST00000467838 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
SEC16A-208ENST00000467838 MT1HP80294 61 aa6.17□□□□□ -1.42
SEC16A-208ENST00000467838 M0R2T5 61 aa6.13□□□□□ -1.43
SEC16A-208ENST00000467838 LCE2BO14633 110 aa6.12□□□□□ -1.43
SEC16A-208ENST00000467838 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
SEC16A-208ENST00000467838 A0A0A0MQY5 61 aa6.06□□□□□ -1.44
SEC16A-208ENST00000467838 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
SEC16A-208ENST00000467838 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
SEC16A-208ENST00000467838 LCE2AQ5TA79 106 aaPredicted RBP5.92□□□□□ -1.46
SEC16A-208ENST00000467838 MT2AP02795 61 aa5.91□□□□□ -1.46
SEC16A-208ENST00000467838 MT1FP04733 61 aa5.91□□□□□ -1.46
SEC16A-208ENST00000467838 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
SEC16A-208ENST00000467838 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
SEC16A-208ENST00000467838 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
SEC16A-208ENST00000467838 MT1BP07438 61 aa5.77□□□□□ -1.49
SEC16A-208ENST00000467838 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
SEC16A-208ENST00000467838 MT1XP80297 61 aa5.76□□□□□ -1.49
SEC16A-208ENST00000467838 KRTAP9-3Q9BYQ3 159 aa5.71□□□□□ -1.5
SEC16A-208ENST00000467838 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
SEC16A-208ENST00000467838 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
SEC16A-208ENST00000467838 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
SEC16A-208ENST00000467838 INE1O15225 51 aa5.55□□□□□ -1.52
SEC16A-208ENST00000467838 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
SEC16A-208ENST00000467838 USH2AO75445 5202 aa5.48□□□□□ -1.53
SEC16A-208ENST00000467838 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
SEC16A-208ENST00000467838 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
SEC16A-208ENST00000467838 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
SEC16A-208ENST00000467838 SSPOA2VEC9 5147 aa5.31□□□□□ -1.56
SEC16A-208ENST00000467838 KRTAP19-6Q3LI70 58 aa5.21□□□□□ -1.58
SEC16A-208ENST00000467838 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
SEC16A-208ENST00000467838 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
SEC16A-208ENST00000467838 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
SEC16A-208ENST00000467838 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
SEC16A-208ENST00000467838 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
SEC16A-208ENST00000467838 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
SEC16A-208ENST00000467838 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
SEC16A-208ENST00000467838 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
SEC16A-208ENST00000467838 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
SEC16A-208ENST00000467838 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms