RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 COX6B2Q6YFQ2 88 aa9.28□□□□□ -0.92
NELFA-213ENST00000467661 XP32Q5T750 250 aa9.27□□□□□ -0.93
NELFA-213ENST00000467661 UQCR11O14957 56 aa9.26□□□□□ -0.93
NELFA-213ENST00000467661 DMBT1Q9UGM3 2413 aaPredicted RBP9.23□□□□□ -0.93
NELFA-213ENST00000467661 J3QL48 77 aa9.22□□□□□ -0.93
NELFA-213ENST00000467661 SPATA8Q6RVD6 105 aa9.22□□□□□ -0.93
NELFA-213ENST00000467661 MIR22HGQ0VDD5 57 aa9.19□□□□□ -0.94
NELFA-213ENST00000467661 A6NN06 94 aa9.16□□□□□ -0.94
NELFA-213ENST00000467661 TPRXLQ17RH7 258 aa9.1□□□□□ -0.95
NELFA-213ENST00000467661 KTN1-AS1Q86SY8 53 aa9.08□□□□□ -0.96
NELFA-213ENST00000467661 HERC1Q15751 4861 aa9.05□□□□□ -0.96
NELFA-213ENST00000467661 A0A1B0GU33 70 aa9□□□□□ -0.97
NELFA-213ENST00000467661 H1FX-AS1Q4G0G2 97 aa8.99□□□□□ -0.97
NELFA-213ENST00000467661 S4R3F8 94 aa8.98□□□□□ -0.97
NELFA-213ENST00000467661 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
NELFA-213ENST00000467661 H0YAA0 97 aa8.92□□□□□ -0.98
NELFA-213ENST00000467661 RBM12B-AS1Q9P1G2 102 aa8.88□□□□□ -0.99
NELFA-213ENST00000467661 HMCN2Q8NDA2 5059 aa8.81□□□□□ -1
NELFA-213ENST00000467661 SEC61BP60468 96 aaKnown RBP8.79□□□□□ -1
NELFA-213ENST00000467661 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
NELFA-213ENST00000467661 LPAP08519 4548 aa8.74□□□□□ -1.01
NELFA-213ENST00000467661 KRTAP3-2Q9BYR7 98 aa8.74□□□□□ -1.01
NELFA-213ENST00000467661 LRP2P98164 4655 aa8.73□□□□□ -1.01
NELFA-213ENST00000467661 K7ERS5 55 aa8.73□□□□□ -1.01
NELFA-213ENST00000467661 CSAG1Q6PB30 78 aa8.71□□□□□ -1.01
NELFA-213ENST00000467661 ADM2Q7Z4H4 148 aa8.64□□□□□ -1.03
NELFA-213ENST00000467661 PRAC1Q96KF2 57 aa8.64□□□□□ -1.03
NELFA-213ENST00000467661 P0C880 135 aa8.63□□□□□ -1.03
NELFA-213ENST00000467661 KRTAP13-4Q3LI77 160 aa8.61□□□□□ -1.03
NELFA-213ENST00000467661 A0A0D9SG42 100 aa8.54□□□□□ -1.04
NELFA-213ENST00000467661 UBR4Q5T4S7 5183 aa8.53□□□□□ -1.04
NELFA-213ENST00000467661 MUC17Q685J3 4493 aa8.51□□□□□ -1.05
NELFA-213ENST00000467661 M0QZ58 72 aa8.49□□□□□ -1.05
NELFA-213ENST00000467661 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
NELFA-213ENST00000467661 ROMO1P60602 79 aa8.41□□□□□ -1.06
NELFA-213ENST00000467661 RNF213Q63HN8 5207 aa8.36□□□□□ -1.07
NELFA-213ENST00000467661 MUC2Q02817 5179 aa8.35□□□□□ -1.07
NELFA-213ENST00000467661 KRTAP25-1Q3LHN0 102 aa8.34□□□□□ -1.07
NELFA-213ENST00000467661 KRTAP19-2Q3LHN2 52 aa8.34□□□□□ -1.07
NELFA-213ENST00000467661 LINC01554Q52M75 96 aa8.34□□□□□ -1.07
NELFA-213ENST00000467661 KRTAP12-1P59990 96 aa8.33□□□□□ -1.08
NELFA-213ENST00000467661 KRTAP12-2P59991 146 aa8.33□□□□□ -1.08
NELFA-213ENST00000467661 SPINT4Q6UDR6 99 aa8.32□□□□□ -1.08
NELFA-213ENST00000467661 R4GN34 69 aa8.31□□□□□ -1.08
NELFA-213ENST00000467661 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
NELFA-213ENST00000467661 LORP23490 312 aaPredicted RBP8.13□□□□□ -1.11
NELFA-213ENST00000467661 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
NELFA-213ENST00000467661 FLGP20930 4061 aaPredicted RBP8.04□□□□□ -1.12
NELFA-213ENST00000467661 LCE2CQ5TA81 110 aa8.01□□□□□ -1.13
NELFA-213ENST00000467661 FAT4Q6V0I7 4981 aa8.01□□□□□ -1.13
NELFA-213ENST00000467661 C10orf95Q9H7T3 257 aa7.97□□□□□ -1.13
NELFA-213ENST00000467661 LCE2AQ5TA79 106 aaPredicted RBP7.89□□□□□ -1.15
NELFA-213ENST00000467661 MT1HP80294 61 aa7.86□□□□□ -1.15
NELFA-213ENST00000467661 CAMK2N1Q7Z7J9 78 aa7.86□□□□□ -1.15
NELFA-213ENST00000467661 M0R2T5 61 aa7.81□□□□□ -1.16
NELFA-213ENST00000467661 SPRR2GQ9BYE4 73 aa7.7□□□□□ -1.18
NELFA-213ENST00000467661 PP632Q6XCG6 107 aa7.63□□□□□ -1.19
NELFA-213ENST00000467661 KRTAP19-1Q8IUB9 90 aa7.61□□□□□ -1.19
NELFA-213ENST00000467661 PLAC4Q8WY50 150 aa7.61□□□□□ -1.19
NELFA-213ENST00000467661 MT2AP02795 61 aa7.59□□□□□ -1.19
NELFA-213ENST00000467661 KRTAP10-10P60014 251 aa7.58□□□□□ -1.2
NELFA-213ENST00000467661 MT1FP04733 61 aa7.55□□□□□ -1.2
NELFA-213ENST00000467661 TNP1P09430 55 aa7.55□□□□□ -1.2
NELFA-213ENST00000467661 KRTAP9-8Q9BYQ0 159 aa7.55□□□□□ -1.2
NELFA-213ENST00000467661 KRTAP15-1Q3LI76 137 aa7.49□□□□□ -1.21
NELFA-213ENST00000467661 KRTAP23-1A1A580 65 aa7.47□□□□□ -1.21
NELFA-213ENST00000467661 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
NELFA-213ENST00000467661 MT1BP07438 61 aa7.27□□□□□ -1.25
NELFA-213ENST00000467661 KRTAP9-3Q9BYQ3 159 aa7.27□□□□□ -1.25
NELFA-213ENST00000467661 KRTAP9-2Q9BYQ4 174 aa7.26□□□□□ -1.25
NELFA-213ENST00000467661 NDUFAF8A1L188 74 aa7.16□□□□□ -1.26
NELFA-213ENST00000467661 KRTAP10-5P60370 271 aa7.15□□□□□ -1.27
NELFA-213ENST00000467661 MT1XP80297 61 aa7.15□□□□□ -1.27
NELFA-213ENST00000467661 LCE2BO14633 110 aa7.14□□□□□ -1.27
NELFA-213ENST00000467661 H3BS24 57 aa7.13□□□□□ -1.27
NELFA-213ENST00000467661 LCE3AQ5TA76 89 aa7.1□□□□□ -1.27
NELFA-213ENST00000467661 FSIP2Q5CZC0 6907 aa7.1□□□□□ -1.27
NELFA-213ENST00000467661 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
NELFA-213ENST00000467661 USH2AO75445 5202 aa7.02□□□□□ -1.29
NELFA-213ENST00000467661 LUZP6Q538Z0 58 aa7□□□□□ -1.29
NELFA-213ENST00000467661 KRTAP8-1Q8IUC2 63 aa6.98□□□□□ -1.29
NELFA-213ENST00000467661 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
NELFA-213ENST00000467661 CRCT1Q9UGL9 99 aa6.93□□□□□ -1.3
NELFA-213ENST00000467661 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
NELFA-213ENST00000467661 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
NELFA-213ENST00000467661 SSPOA2VEC9 5147 aa6.87□□□□□ -1.31
NELFA-213ENST00000467661 KRTAP9-6A0A140TA67 174 aa6.84□□□□□ -1.31
NELFA-213ENST00000467661 KRTAP12-3P60328 96 aa6.81□□□□□ -1.32
NELFA-213ENST00000467661 KRTAP19-6Q3LI70 58 aa6.79□□□□□ -1.32
NELFA-213ENST00000467661 FCGBPQ9Y6R7 5405 aaPredicted RBP6.68□□□□□ -1.34
NELFA-213ENST00000467661 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.36
NELFA-213ENST00000467661 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
NELFA-213ENST00000467661 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
NELFA-213ENST00000467661 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
NELFA-213ENST00000467661 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
NELFA-213ENST00000467661 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
NELFA-213ENST00000467661 LCE3CQ5T5A8 94 aa6.4□□□□□ -1.38
NELFA-213ENST00000467661 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
NELFA-213ENST00000467661 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
NELFA-213ENST00000467661 KMT2DO14686 5537 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms