RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 NREPQ16612 68 aa3.74□□□□□ -1.81
SND1-205ENST00000467238 TMEM254Q8TBM7 123 aa3.73□□□□□ -1.81
SND1-205ENST00000467238 SEC61GP60059 68 aa3.72□□□□□ -1.81
SND1-205ENST00000467238 Q6ZQY7 126 aa3.72□□□□□ -1.81
SND1-205ENST00000467238 PRR15Q8IV56 129 aa3.72□□□□□ -1.81
SND1-205ENST00000467238 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
SND1-205ENST00000467238 BPY2O14599 106 aa3.71□□□□□ -1.82
SND1-205ENST00000467238 NDUFB1O75438 58 aa3.71□□□□□ -1.82
SND1-205ENST00000467238 IGFL1Q6UW32 110 aa3.71□□□□□ -1.82
SND1-205ENST00000467238 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
SND1-205ENST00000467238 M0R2T5 61 aa3.69□□□□□ -1.82
SND1-205ENST00000467238 Q1T7F1 81 aa3.69□□□□□ -1.82
SND1-205ENST00000467238 COX6B2Q6YFQ2 88 aa3.69□□□□□ -1.82
SND1-205ENST00000467238 SNURFQ9Y675 71 aa3.69□□□□□ -1.82
SND1-205ENST00000467238 USH2AO75445 5202 aa3.69□□□□□ -1.82
SND1-205ENST00000467238 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
SND1-205ENST00000467238 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
SND1-205ENST00000467238 OCR1Q9BZK8 76 aa3.67□□□□□ -1.82
SND1-205ENST00000467238 CYP4F30PQ9H0H9 118 aa3.66□□□□□ -1.82
SND1-205ENST00000467238 hDV103S1A0JD37 113 aa3.65□□□□□ -1.83
SND1-205ENST00000467238 H3BPC8 53 aa3.65□□□□□ -1.83
SND1-205ENST00000467238 IGKV4-1P06312 121 aa3.65□□□□□ -1.83
SND1-205ENST00000467238 ATP11AUNQ6ZP68 121 aa3.65□□□□□ -1.83
SND1-205ENST00000467238 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
SND1-205ENST00000467238 Q96NJ1 140 aa3.63□□□□□ -1.83
SND1-205ENST00000467238 SPANXA2-OT1Q8N9U9 137 aa3.62□□□□□ -1.83
SND1-205ENST00000467238 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
SND1-205ENST00000467238 A8MUU9 505 aa3.61□□□□□ -1.83
SND1-205ENST00000467238 NDUFS5O43920 106 aa3.61□□□□□ -1.83
SND1-205ENST00000467238 MP68P56378 58 aa3.61□□□□□ -1.83
SND1-205ENST00000467238 NOTCH2NLQ7Z3S9 236 aa3.61□□□□□ -1.83
SND1-205ENST00000467238 A0A087WSZ3 146 aa3.6□□□□□ -1.83
SND1-205ENST00000467238 ZCCHC13Q8WW36 166 aaKnown RBP3.6□□□□□ -1.83
SND1-205ENST00000467238 HCG22E2RYF7 251 aa3.59□□□□□ -1.83
SND1-205ENST00000467238 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
SND1-205ENST00000467238 DSCR10P59022 87 aa3.58□□□□□ -1.84
SND1-205ENST00000467238 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
SND1-205ENST00000467238 C1orf64Q8NEQ6 169 aa3.58□□□□□ -1.84
SND1-205ENST00000467238 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
SND1-205ENST00000467238 A0A1W2PNM2 257 aa3.57□□□□□ -1.84
SND1-205ENST00000467238 TRAV22A0A0B4J277 110 aa3.56□□□□□ -1.84
SND1-205ENST00000467238 KRTAP16-1A8MUX0 517 aa3.56□□□□□ -1.84
SND1-205ENST00000467238 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
SND1-205ENST00000467238 LINC00313P59037 77 aa3.55□□□□□ -1.84
SND1-205ENST00000467238 LINC00208Q96KT6 92 aa3.54□□□□□ -1.84
SND1-205ENST00000467238 LOC101927531A0A1B0GV80 90 aa3.52□□□□□ -1.85
SND1-205ENST00000467238 HRES1P13985 223 aa3.52□□□□□ -1.85
SND1-205ENST00000467238 Q8N9L7 120 aa3.52□□□□□ -1.85
SND1-205ENST00000467238 LINC00472Q9H8W2 130 aa3.52□□□□□ -1.85
SND1-205ENST00000467238 PSPHP1O15172 72 aa3.51□□□□□ -1.85
SND1-205ENST00000467238 MT2AP02795 61 aa3.51□□□□□ -1.85
SND1-205ENST00000467238 DEFB116Q30KQ4 102 aa3.51□□□□□ -1.85
SND1-205ENST00000467238 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
SND1-205ENST00000467238 CHKB-CPT1BH3BT56 60 aa3.5□□□□□ -1.85
SND1-205ENST00000467238 Q5VV11 94 aa3.5□□□□□ -1.85
SND1-205ENST00000467238 TP53AIP1Q9HCN2 124 aa3.5□□□□□ -1.85
SND1-205ENST00000467238 CDC42SE1Q9NRR8 79 aa3.5□□□□□ -1.85
SND1-205ENST00000467238 IGHV6-1A0A0B4J1U7 121 aa3.49□□□□□ -1.85
SND1-205ENST00000467238 A8MUN3 132 aa3.49□□□□□ -1.85
SND1-205ENST00000467238 MT1FP04733 61 aa3.49□□□□□ -1.85
SND1-205ENST00000467238 C7orf65Q6ZTY9 151 aa3.49□□□□□ -1.85
SND1-205ENST00000467238 RBM12B-AS1Q9P1G2 102 aa3.49□□□□□ -1.85
SND1-205ENST00000467238 H0Y9P7 68 aa3.48□□□□□ -1.85
SND1-205ENST00000467238 K7EQZ3 153 aa3.48□□□□□ -1.85
SND1-205ENST00000467238 PRR15LQ9BU68 103 aa3.48□□□□□ -1.85
SND1-205ENST00000467238 A0A1B0GVX0 72 aa3.47□□□□□ -1.85
SND1-205ENST00000467238 A6NED7 52 aa3.47□□□□□ -1.85
SND1-205ENST00000467238 C8orf87E5RJ46 101 aa3.47□□□□□ -1.85
SND1-205ENST00000467238 CASC2Q6XLA1 102 aa3.47□□□□□ -1.85
SND1-205ENST00000467238 LINC01558Q9Y6Z2 57 aa3.46□□□□□ -1.86
SND1-205ENST00000467238 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
SND1-205ENST00000467238 A6NN06 94 aa3.45□□□□□ -1.86
SND1-205ENST00000467238 A8MWP4 228 aa3.45□□□□□ -1.86
SND1-205ENST00000467238 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
SND1-205ENST00000467238 LCA10Q71F78 164 aa3.45□□□□□ -1.86
SND1-205ENST00000467238 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
SND1-205ENST00000467238 COA5Q86WW8 74 aa3.44□□□□□ -1.86
SND1-205ENST00000467238 SPTSSBQ8NFR3 76 aa3.43□□□□□ -1.86
SND1-205ENST00000467238 SPINK7P58062 85 aa3.42□□□□□ -1.86
SND1-205ENST00000467238 WFDC13Q8IUB5 93 aa3.42□□□□□ -1.86
SND1-205ENST00000467238 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
SND1-205ENST00000467238 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
SND1-205ENST00000467238 MMP24-AS1A0A0U1RRL7 71 aa3.37□□□□□ -1.87
SND1-205ENST00000467238 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
SND1-205ENST00000467238 ACYP2P14621 99 aa3.35□□□□□ -1.87
SND1-205ENST00000467238 MRPL34Q9BQ48 92 aaKnown RBP3.34□□□□□ -1.87
SND1-205ENST00000467238 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
SND1-205ENST00000467238 H1FX-AS1Q4G0G2 97 aa3.31□□□□□ -1.88
SND1-205ENST00000467238 LINC01554Q52M75 96 aa3.31□□□□□ -1.88
SND1-205ENST00000467238 A8MU10 97 aa3.29□□□□□ -1.88
SND1-205ENST00000467238 UQCR11O14957 56 aa3.29□□□□□ -1.88
SND1-205ENST00000467238 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
SND1-205ENST00000467238 A0A1B0GU69 56 aa3.28□□□□□ -1.88
SND1-205ENST00000467238 Q5W150 140 aa3.28□□□□□ -1.88
SND1-205ENST00000467238 NEBP20929 6669 aa3.28□□□□□ -1.88
SND1-205ENST00000467238 DMAC1Q96GE9 116 aa3.27□□□□□ -1.89
SND1-205ENST00000467238 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
SND1-205ENST00000467238 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
SND1-205ENST00000467238 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
SND1-205ENST00000467238 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms