RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 A0A087WVE0 104 aa3.53□□□□□ -1.84
UBXN4-205ENST00000467065 RBM12B-AS1Q9P1G2 102 aa3.53□□□□□ -1.84
UBXN4-205ENST00000467065 SERP1Q9Y6X1 66 aa3.52□□□□□ -1.85
UBXN4-205ENST00000467065 IGKV2D-30A0A075B6S6 120 aa3.51□□□□□ -1.85
UBXN4-205ENST00000467065 TRAV22A0A0B4J277 110 aa3.51□□□□□ -1.85
UBXN4-205ENST00000467065 FAM236DA0A1B0GTK5 79 aa3.51□□□□□ -1.85
UBXN4-205ENST00000467065 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
UBXN4-205ENST00000467065 IGKV2-30P06310 120 aa3.51□□□□□ -1.85
UBXN4-205ENST00000467065 FAM236CP0DP71 79 aa3.51□□□□□ -1.85
UBXN4-205ENST00000467065 COX6B2Q6YFQ2 88 aa3.51□□□□□ -1.85
UBXN4-205ENST00000467065 C7orf65Q6ZTY9 151 aa3.5□□□□□ -1.85
UBXN4-205ENST00000467065 LOC101927531A0A1B0GV80 90 aa3.49□□□□□ -1.85
UBXN4-205ENST00000467065 H0Y9P7 68 aa3.49□□□□□ -1.85
UBXN4-205ENST00000467065 H3BPC8 53 aa3.49□□□□□ -1.85
UBXN4-205ENST00000467065 H7BZZ5 65 aa3.49□□□□□ -1.85
UBXN4-205ENST00000467065 SPINK7P58062 85 aa3.49□□□□□ -1.85
UBXN4-205ENST00000467065 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
UBXN4-205ENST00000467065 C1orf64Q8NEQ6 169 aa3.48□□□□□ -1.85
UBXN4-205ENST00000467065 SMIM26A0A096LP01 95 aa3.47□□□□□ -1.85
UBXN4-205ENST00000467065 MT1HP80294 61 aa3.47□□□□□ -1.85
UBXN4-205ENST00000467065 C20orf197Q8N268 126 aa3.47□□□□□ -1.85
UBXN4-205ENST00000467065 LINC00208Q96KT6 92 aa3.47□□□□□ -1.85
UBXN4-205ENST00000467065 FLGP20930 4061 aaPredicted RBP3.45□□□□□ -1.86
UBXN4-205ENST00000467065 CYSTM1Q9H1C7 97 aa3.45□□□□□ -1.86
UBXN4-205ENST00000467065 Q5W150 140 aa3.44□□□□□ -1.86
UBXN4-205ENST00000467065 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
UBXN4-205ENST00000467065 CYP4F30PQ9H0H9 118 aa3.42□□□□□ -1.86
UBXN4-205ENST00000467065 M0R2T5 61 aa3.41□□□□□ -1.86
UBXN4-205ENST00000467065 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
UBXN4-205ENST00000467065 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
UBXN4-205ENST00000467065 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
UBXN4-205ENST00000467065 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.87
UBXN4-205ENST00000467065 C4orf26Q17RF5 130 aa3.38□□□□□ -1.87
UBXN4-205ENST00000467065 V9GYY9 64 aa3.38□□□□□ -1.87
UBXN4-205ENST00000467065 A8MUN3 132 aa3.37□□□□□ -1.87
UBXN4-205ENST00000467065 SPANXA2-OT1Q8N9U9 137 aa3.37□□□□□ -1.87
UBXN4-205ENST00000467065 Q1T7F1 81 aa3.36□□□□□ -1.87
UBXN4-205ENST00000467065 H1FX-AS1Q4G0G2 97 aa3.36□□□□□ -1.87
UBXN4-205ENST00000467065 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
UBXN4-205ENST00000467065 SNURFQ9Y675 71 aa3.36□□□□□ -1.87
UBXN4-205ENST00000467065 CHKB-CPT1BH3BT56 60 aa3.35□□□□□ -1.87
UBXN4-205ENST00000467065 HRES1P13985 223 aa3.35□□□□□ -1.87
UBXN4-205ENST00000467065 ACYP2P14621 99 aa3.35□□□□□ -1.87
UBXN4-205ENST00000467065 SPTSSBQ8NFR3 76 aa3.35□□□□□ -1.87
UBXN4-205ENST00000467065 S4R3F8 94 aa3.32□□□□□ -1.88
UBXN4-205ENST00000467065 CSAG1Q6PB30 78 aa3.31□□□□□ -1.88
UBXN4-205ENST00000467065 KRTAP23-1A1A580 65 aa3.29□□□□□ -1.88
UBXN4-205ENST00000467065 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
UBXN4-205ENST00000467065 MPLKIPQ8TAP9 179 aa3.28□□□□□ -1.88
UBXN4-205ENST00000467065 SEC61GP60059 68 aa3.26□□□□□ -1.89
UBXN4-205ENST00000467065 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-205ENST00000467065 DMAC1Q96GE9 116 aa3.25□□□□□ -1.89
UBXN4-205ENST00000467065 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
UBXN4-205ENST00000467065 MT2AP02795 61 aa3.23□□□□□ -1.89
UBXN4-205ENST00000467065 BRK1Q8WUW1 75 aa3.23□□□□□ -1.89
UBXN4-205ENST00000467065 LCA10Q71F78 164 aa3.22□□□□□ -1.89
UBXN4-205ENST00000467065 MT1FP04733 61 aa3.21□□□□□ -1.9
UBXN4-205ENST00000467065 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
UBXN4-205ENST00000467065 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
UBXN4-205ENST00000467065 USH2AO75445 5202 aa3.19□□□□□ -1.9
UBXN4-205ENST00000467065 KRTAP10-10P60014 251 aa3.18□□□□□ -1.9
UBXN4-205ENST00000467065 Q5VV11 94 aa3.18□□□□□ -1.9
UBXN4-205ENST00000467065 COA5Q86WW8 74 aa3.18□□□□□ -1.9
UBXN4-205ENST00000467065 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
UBXN4-205ENST00000467065 PRR15LQ9BU68 103 aa3.16□□□□□ -1.9
UBXN4-205ENST00000467065 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
UBXN4-205ENST00000467065 ADM2Q7Z4H4 148 aa3.14□□□□□ -1.91
UBXN4-205ENST00000467065 PSPHP1O15172 72 aa3.13□□□□□ -1.91
UBXN4-205ENST00000467065 CRIPTQ9P021 101 aa3.13□□□□□ -1.91
UBXN4-205ENST00000467065 H0YAA0 97 aa3.12□□□□□ -1.91
UBXN4-205ENST00000467065 A0A1B0GU69 56 aa3.11□□□□□ -1.91
UBXN4-205ENST00000467065 KTN1-AS1Q86SY8 53 aa3.11□□□□□ -1.91
UBXN4-205ENST00000467065 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
UBXN4-205ENST00000467065 R4GN34 69 aa3.1□□□□□ -1.91
UBXN4-205ENST00000467065 A6NED7 52 aa3.09□□□□□ -1.91
UBXN4-205ENST00000467065 A6NN06 94 aa3.07□□□□□ -1.92
UBXN4-205ENST00000467065 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
UBXN4-205ENST00000467065 M0QZ58 72 aa3.05□□□□□ -1.92
UBXN4-205ENST00000467065 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
UBXN4-205ENST00000467065 A0A1B0GU33 70 aa3.04□□□□□ -1.92
UBXN4-205ENST00000467065 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
UBXN4-205ENST00000467065 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
UBXN4-205ENST00000467065 LINC01554Q52M75 96 aa3.03□□□□□ -1.92
UBXN4-205ENST00000467065 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
UBXN4-205ENST00000467065 SPATA8Q6RVD6 105 aa3.02□□□□□ -1.93
UBXN4-205ENST00000467065 PLAC4Q8WY50 150 aa3.02□□□□□ -1.93
UBXN4-205ENST00000467065 UQCR11O14957 56 aa3.01□□□□□ -1.93
UBXN4-205ENST00000467065 K7ERS5 55 aa2.99□□□□□ -1.93
UBXN4-205ENST00000467065 P0C880 135 aa2.99□□□□□ -1.93
UBXN4-205ENST00000467065 MIR22HGQ0VDD5 57 aa2.96□□□□□ -1.94
UBXN4-205ENST00000467065 A8MU10 97 aa2.95□□□□□ -1.94
UBXN4-205ENST00000467065 A0A0D9SG42 100 aa2.94□□□□□ -1.94
UBXN4-205ENST00000467065 SPRR2GQ9BYE4 73 aa2.94□□□□□ -1.94
UBXN4-205ENST00000467065 MT1BP07438 61 aa2.93□□□□□ -1.94
UBXN4-205ENST00000467065 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
UBXN4-205ENST00000467065 SPINT4Q6UDR6 99 aa2.93□□□□□ -1.94
UBXN4-205ENST00000467065 CAMK2N1Q7Z7J9 78 aa2.93□□□□□ -1.94
UBXN4-205ENST00000467065 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
UBXN4-205ENST00000467065 KRTAP19-8Q3LI54 63 aa2.91□□□□□ -1.94
UBXN4-205ENST00000467065 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms