RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 SSBP3-AS1Q7Z2R9 100 aa8.65□□□□□ -1.03
SNED1-208ENST00000466618 LINC00304Q8N9R0 145 aa8.56□□□□□ -1.04
SNED1-208ENST00000466618 KRTAP16-1A8MUX0 517 aa8.54□□□□□ -1.04
SNED1-208ENST00000466618 J3QL48 77 aa8.54□□□□□ -1.04
SNED1-208ENST00000466618 IGKV2D-30A0A075B6S6 120 aa8.52□□□□□ -1.05
SNED1-208ENST00000466618 SPINK1P00995 79 aa8.51□□□□□ -1.05
SNED1-208ENST00000466618 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
SNED1-208ENST00000466618 A8MUU9 505 aa8.49□□□□□ -1.05
SNED1-208ENST00000466618 RPS29P62273 56 aaKnown RBP8.49□□□□□ -1.05
SNED1-208ENST00000466618 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
SNED1-208ENST00000466618 HERC1Q15751 4861 aa8.48□□□□□ -1.05
SNED1-208ENST00000466618 H0YAA0 97 aa8.45□□□□□ -1.06
SNED1-208ENST00000466618 ROMO1P60602 79 aa8.43□□□□□ -1.06
SNED1-208ENST00000466618 HMCN2Q8NDA2 5059 aa8.32□□□□□ -1.08
SNED1-208ENST00000466618 A0A1B0GU33 70 aa8.27□□□□□ -1.09
SNED1-208ENST00000466618 P0C880 135 aa8.24□□□□□ -1.09
SNED1-208ENST00000466618 H1FX-AS1Q4G0G2 97 aa8.24□□□□□ -1.09
SNED1-208ENST00000466618 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
SNED1-208ENST00000466618 TPRXLQ17RH7 258 aa8.18□□□□□ -1.1
SNED1-208ENST00000466618 LPAP08519 4548 aa8.18□□□□□ -1.1
SNED1-208ENST00000466618 KRTAP3-1Q9BYR8 98 aa8.16□□□□□ -1.1
SNED1-208ENST00000466618 LRP2P98164 4655 aa8.14□□□□□ -1.11
SNED1-208ENST00000466618 C9orf92A6NGG3 77 aa8.1□□□□□ -1.11
SNED1-208ENST00000466618 K7ERS5 55 aa8.08□□□□□ -1.12
SNED1-208ENST00000466618 COX6B2Q6YFQ2 88 aa8.07□□□□□ -1.12
SNED1-208ENST00000466618 XP32Q5T750 250 aa8.05□□□□□ -1.12
SNED1-208ENST00000466618 UBR4Q5T4S7 5183 aa7.98□□□□□ -1.13
SNED1-208ENST00000466618 C20orf166-AS1Q96NR2 134 aa7.98□□□□□ -1.13
SNED1-208ENST00000466618 RPL37P61927 97 aaKnown RBP7.95□□□□□ -1.14
SNED1-208ENST00000466618 SPINT4Q6UDR6 99 aa7.94□□□□□ -1.14
SNED1-208ENST00000466618 MUC17Q685J3 4493 aa7.92□□□□□ -1.14
SNED1-208ENST00000466618 KRTAP15-1Q3LI76 137 aa7.89□□□□□ -1.15
SNED1-208ENST00000466618 KRTAP13-4Q3LI77 160 aa7.89□□□□□ -1.15
SNED1-208ENST00000466618 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
SNED1-208ENST00000466618 SEC61BP60468 96 aaKnown RBP7.87□□□□□ -1.15
SNED1-208ENST00000466618 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
SNED1-208ENST00000466618 NDUFAF8A1L188 74 aa7.85□□□□□ -1.15
SNED1-208ENST00000466618 RNF213Q63HN8 5207 aa7.83□□□□□ -1.16
SNED1-208ENST00000466618 A0A0D9SG42 100 aa7.82□□□□□ -1.16
SNED1-208ENST00000466618 MUC2Q02817 5179 aa7.8□□□□□ -1.16
SNED1-208ENST00000466618 KRTAP4-1Q9BYQ7 146 aa7.78□□□□□ -1.16
SNED1-208ENST00000466618 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
SNED1-208ENST00000466618 KRTAP3-2Q9BYR7 98 aa7.78□□□□□ -1.16
SNED1-208ENST00000466618 S4R3F8 94 aa7.69□□□□□ -1.18
SNED1-208ENST00000466618 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
SNED1-208ENST00000466618 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
SNED1-208ENST00000466618 KRTAP19-2Q3LHN2 52 aa7.56□□□□□ -1.2
SNED1-208ENST00000466618 FAT4Q6V0I7 4981 aa7.53□□□□□ -1.2
SNED1-208ENST00000466618 LCE2CQ5TA81 110 aa7.49□□□□□ -1.21
SNED1-208ENST00000466618 A0A0A0MQY5 61 aa7.4□□□□□ -1.22
SNED1-208ENST00000466618 FLGP20930 4061 aaPredicted RBP7.39□□□□□ -1.23
SNED1-208ENST00000466618 MT1HP80294 61 aa7.34□□□□□ -1.23
SNED1-208ENST00000466618 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
SNED1-208ENST00000466618 M0QZ58 72 aa7.32□□□□□ -1.24
SNED1-208ENST00000466618 LUZP6Q538Z0 58 aa7.24□□□□□ -1.25
SNED1-208ENST00000466618 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
SNED1-208ENST00000466618 M0R2T5 61 aa7.17□□□□□ -1.26
SNED1-208ENST00000466618 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
SNED1-208ENST00000466618 KRTAP9-8Q9BYQ0 159 aa7.04□□□□□ -1.28
SNED1-208ENST00000466618 R4GN34 69 aa7.03□□□□□ -1.28
SNED1-208ENST00000466618 MT2AP02795 61 aa6.96□□□□□ -1.29
SNED1-208ENST00000466618 MT1FP04733 61 aa6.92□□□□□ -1.3
SNED1-208ENST00000466618 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
SNED1-208ENST00000466618 KRTAP10-10P60014 251 aa6.86□□□□□ -1.31
SNED1-208ENST00000466618 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
SNED1-208ENST00000466618 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
SNED1-208ENST00000466618 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
SNED1-208ENST00000466618 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
SNED1-208ENST00000466618 KRTAP19-1Q8IUB9 90 aa6.69□□□□□ -1.34
SNED1-208ENST00000466618 SPRR2GQ9BYE4 73 aa6.67□□□□□ -1.34
SNED1-208ENST00000466618 LCE2BO14633 110 aa6.66□□□□□ -1.34
SNED1-208ENST00000466618 KRTAP9-2Q9BYQ4 174 aa6.66□□□□□ -1.34
SNED1-208ENST00000466618 USH2AO75445 5202 aa6.61□□□□□ -1.35
SNED1-208ENST00000466618 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
SNED1-208ENST00000466618 KRTAP19-8Q3LI54 63 aa6.55□□□□□ -1.36
SNED1-208ENST00000466618 TNP1P09430 55 aa6.54□□□□□ -1.36
SNED1-208ENST00000466618 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
SNED1-208ENST00000466618 MT1BP07438 61 aa6.48□□□□□ -1.37
SNED1-208ENST00000466618 SSPOA2VEC9 5147 aa6.46□□□□□ -1.38
SNED1-208ENST00000466618 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
SNED1-208ENST00000466618 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
SNED1-208ENST00000466618 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
SNED1-208ENST00000466618 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
SNED1-208ENST00000466618 INE1O15225 51 aa6.24□□□□□ -1.41
SNED1-208ENST00000466618 FCGBPQ9Y6R7 5405 aaPredicted RBP6.23□□□□□ -1.41
SNED1-208ENST00000466618 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
SNED1-208ENST00000466618 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
SNED1-208ENST00000466618 MT1XP80297 61 aa6.2□□□□□ -1.42
SNED1-208ENST00000466618 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
SNED1-208ENST00000466618 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
SNED1-208ENST00000466618 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
SNED1-208ENST00000466618 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.91□□□□□ -1.46
SNED1-208ENST00000466618 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
SNED1-208ENST00000466618 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
SNED1-208ENST00000466618 KMT2DO14686 5537 aa5.82□□□□□ -1.48
SNED1-208ENST00000466618 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
SNED1-208ENST00000466618 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
SNED1-208ENST00000466618 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
SNED1-208ENST00000466618 KRTAP6-3Q3LI67 103 aa5.69□□□□□ -1.5
SNED1-208ENST00000466618 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms