RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 K7ERU9 68 aa2.41□□□□□ -2.02
EXOSC3-204ENST00000465860 HRES1P13985 223 aa2.41□□□□□ -2.02
EXOSC3-204ENST00000465860 SEC61GP60059 68 aa2.41□□□□□ -2.02
EXOSC3-204ENST00000465860 CXCL6P80162 114 aa2.41□□□□□ -2.02
EXOSC3-204ENST00000465860 COX6B2Q6YFQ2 88 aa2.41□□□□□ -2.02
EXOSC3-204ENST00000465860 LINC00846Q9NV44 126 aa2.41□□□□□ -2.02
EXOSC3-204ENST00000465860 M0R2T5 61 aa2.4□□□□□ -2.03
EXOSC3-204ENST00000465860 LINC00643Q86TS7 51 aa2.4□□□□□ -2.03
EXOSC3-204ENST00000465860 PRR15Q8IV56 129 aa2.4□□□□□ -2.03
EXOSC3-204ENST00000465860 C8orf17Q9NRJ1 99 aa2.39□□□□□ -2.03
EXOSC3-204ENST00000465860 FSIP2Q5CZC0 6907 aa2.39□□□□□ -2.03
EXOSC3-204ENST00000465860 USH2AO75445 5202 aa2.38□□□□□ -2.03
EXOSC3-204ENST00000465860 MMP24-AS1A0A0U1RRL7 71 aa2.38□□□□□ -2.03
EXOSC3-204ENST00000465860 K7EQZ3 153 aa2.38□□□□□ -2.03
EXOSC3-204ENST00000465860 TMEM254Q8TBM7 123 aa2.38□□□□□ -2.03
EXOSC3-204ENST00000465860 hDV103S1A0JD37 113 aa2.37□□□□□ -2.03
EXOSC3-204ENST00000465860 HCG22E2RYF7 251 aa2.37□□□□□ -2.03
EXOSC3-204ENST00000465860 CASC2Q6XLA1 102 aa2.37□□□□□ -2.03
EXOSC3-204ENST00000465860 Q8N9L7 120 aa2.37□□□□□ -2.03
EXOSC3-204ENST00000465860 ZCCHC13Q8WW36 166 aaKnown RBP2.37□□□□□ -2.03
EXOSC3-204ENST00000465860 NDUFS5O43920 106 aa2.36□□□□□ -2.03
EXOSC3-204ENST00000465860 HIST1H4AP62805 103 aaKnown RBP2.36□□□□□ -2.03
EXOSC3-204ENST00000465860 WFDC13Q8IUB5 93 aa2.36□□□□□ -2.03
EXOSC3-204ENST00000465860 MRPL34Q9BQ48 92 aaKnown RBP2.36□□□□□ -2.03
EXOSC3-204ENST00000465860 CRCT1Q9UGL9 99 aa2.36□□□□□ -2.03
EXOSC3-204ENST00000465860 SSPOA2VEC9 5147 aa2.35□□□□□ -2.03
EXOSC3-204ENST00000465860 SPINK7P58062 85 aa2.35□□□□□ -2.03
EXOSC3-204ENST00000465860 MT2AP02795 61 aa2.34□□□□□ -2.03
EXOSC3-204ENST00000465860 Q5W150 140 aa2.34□□□□□ -2.03
EXOSC3-204ENST00000465860 IMUPQ9GZP8 106 aa2.34□□□□□ -2.03
EXOSC3-204ENST00000465860 TP53AIP1Q9HCN2 124 aa2.34□□□□□ -2.03
EXOSC3-204ENST00000465860 FAM236DA0A1B0GTK5 79 aa2.33□□□□□ -2.04
EXOSC3-204ENST00000465860 MT1FP04733 61 aa2.33□□□□□ -2.04
EXOSC3-204ENST00000465860 FAM236CP0DP71 79 aa2.33□□□□□ -2.04
EXOSC3-204ENST00000465860 SCGB1A1P11684 91 aa2.31□□□□□ -2.04
EXOSC3-204ENST00000465860 RBM12B-AS1Q9P1G2 102 aa2.31□□□□□ -2.04
EXOSC3-204ENST00000465860 TRAV22A0A0B4J277 110 aa2.3□□□□□ -2.04
EXOSC3-204ENST00000465860 ATOX1O00244 68 aa2.3□□□□□ -2.04
EXOSC3-204ENST00000465860 UQCRQO14949 82 aa2.3□□□□□ -2.04
EXOSC3-204ENST00000465860 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
EXOSC3-204ENST00000465860 SMIM20Q8N5G0 67 aa2.3□□□□□ -2.04
EXOSC3-204ENST00000465860 A0A087WVE0 104 aa2.29□□□□□ -2.04
EXOSC3-204ENST00000465860 FCGBPQ9Y6R7 5405 aaPredicted RBP2.29□□□□□ -2.04
EXOSC3-204ENST00000465860 FAM236AA0A1B0GUQ0 79 aa2.28□□□□□ -2.04
EXOSC3-204ENST00000465860 FAM236BA0A1B0GV22 79 aa2.28□□□□□ -2.04
EXOSC3-204ENST00000465860 LOC101927531A0A1B0GV80 90 aa2.28□□□□□ -2.04
EXOSC3-204ENST00000465860 MT-ATP8P03928 68 aa2.28□□□□□ -2.04
EXOSC3-204ENST00000465860 MP68P56378 58 aa2.28□□□□□ -2.04
EXOSC3-204ENST00000465860 KRTAP10-10P60014 251 aa2.28□□□□□ -2.04
EXOSC3-204ENST00000465860 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
EXOSC3-204ENST00000465860 H3BPC8 53 aa2.27□□□□□ -2.05
EXOSC3-204ENST00000465860 H0Y9P7 68 aa2.26□□□□□ -2.05
EXOSC3-204ENST00000465860 C4orf26Q17RF5 130 aa2.26□□□□□ -2.05
EXOSC3-204ENST00000465860 TRAV7A0A075B6U4 112 aa2.25□□□□□ -2.05
EXOSC3-204ENST00000465860 H1FX-AS1Q4G0G2 97 aa2.25□□□□□ -2.05
EXOSC3-204ENST00000465860 C5orf47Q569G3 176 aa2.25□□□□□ -2.05
EXOSC3-204ENST00000465860 PP632Q6XCG6 107 aa2.23□□□□□ -2.05
EXOSC3-204ENST00000465860 C1orf64Q8NEQ6 169 aa2.23□□□□□ -2.05
EXOSC3-204ENST00000465860 LINC00208Q96KT6 92 aa2.23□□□□□ -2.05
EXOSC3-204ENST00000465860 SERP2Q8N6R1 65 aa2.22□□□□□ -2.05
EXOSC3-204ENST00000465860 CYP4F30PQ9H0H9 118 aa2.22□□□□□ -2.05
EXOSC3-204ENST00000465860 A8MUN3 132 aa2.2□□□□□ -2.06
EXOSC3-204ENST00000465860 LCA10Q71F78 164 aa2.2□□□□□ -2.06
EXOSC3-204ENST00000465860 CAMK2N1Q7Z7J9 78 aa2.2□□□□□ -2.06
EXOSC3-204ENST00000465860 ANAPC13Q9BS18 74 aa2.19□□□□□ -2.06
EXOSC3-204ENST00000465860 NDUFC1O43677 76 aa2.18□□□□□ -2.06
EXOSC3-204ENST00000465860 COX7CP15954 63 aa2.18□□□□□ -2.06
EXOSC3-204ENST00000465860 KRTAP19-6Q3LI70 58 aa2.18□□□□□ -2.06
EXOSC3-204ENST00000465860 C20orf197Q8N268 126 aa2.18□□□□□ -2.06
EXOSC3-204ENST00000465860 S4R3F8 94 aa2.18□□□□□ -2.06
EXOSC3-204ENST00000465860 MACF1Q9UPN3 7388 aaKnown RBP2.17□□□□□ -2.06
EXOSC3-204ENST00000465860 KLKP1Q107X0 134 aa2.17□□□□□ -2.06
EXOSC3-204ENST00000465860 SNURFQ9Y675 71 aa2.16□□□□□ -2.06
EXOSC3-204ENST00000465860 MT1BP07438 61 aa2.15□□□□□ -2.07
EXOSC3-204ENST00000465860 SPANXA2-OT1Q8N9U9 137 aa2.15□□□□□ -2.07
EXOSC3-204ENST00000465860 DMAC1Q96GE9 116 aa2.15□□□□□ -2.07
EXOSC3-204ENST00000465860 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
EXOSC3-204ENST00000465860 CSAG1Q6PB30 78 aa2.14□□□□□ -2.07
EXOSC3-204ENST00000465860 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
EXOSC3-204ENST00000465860 CHKB-CPT1BH3BT56 60 aa2.13□□□□□ -2.07
EXOSC3-204ENST00000465860 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
EXOSC3-204ENST00000465860 ACYP2P14621 99 aa2.13□□□□□ -2.07
EXOSC3-204ENST00000465860 SPRR2GQ9BYE4 73 aa2.13□□□□□ -2.07
EXOSC3-204ENST00000465860 ATP5EP56381 51 aaPredicted RBP2.12□□□□□ -2.07
EXOSC3-204ENST00000465860 KRTAP19-8Q3LI54 63 aa2.12□□□□□ -2.07
EXOSC3-204ENST00000465860 H7BZZ5 65 aa2.1□□□□□ -2.07
EXOSC3-204ENST00000465860 TMEM258P61165 79 aa2.09□□□□□ -2.07
EXOSC3-204ENST00000465860 CCDC179H3BU77 68 aa2.08□□□□□ -2.08
EXOSC3-204ENST00000465860 Q5VV11 94 aa2.08□□□□□ -2.08
EXOSC3-204ENST00000465860 KMT2DO14686 5537 aa2.07□□□□□ -2.08
EXOSC3-204ENST00000465860 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
EXOSC3-204ENST00000465860 H0YAA0 97 aa2.07□□□□□ -2.08
EXOSC3-204ENST00000465860 ADM2Q7Z4H4 148 aa2.07□□□□□ -2.08
EXOSC3-204ENST00000465860 COA5Q86WW8 74 aa2.07□□□□□ -2.08
EXOSC3-204ENST00000465860 P0C880 135 aa2.06□□□□□ -2.08
EXOSC3-204ENST00000465860 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
EXOSC3-204ENST00000465860 A6NN06 94 aa2.05□□□□□ -2.08
EXOSC3-204ENST00000465860 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
EXOSC3-204ENST00000465860 CYSTM1Q9H1C7 97 aa2.05□□□□□ -2.08
EXOSC3-204ENST00000465860 CRIPTQ9P021 101 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms