RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 C10orf95Q9H7T3 257 aa6.03□□□□□ -1.44
CCDC115-204ENST00000465315 KIAA1109Q2LD37 5005 aa6.02□□□□□ -1.45
CCDC115-204ENST00000465315 MYCBP2O75592 4640 aa5.99□□□□□ -1.45
CCDC115-204ENST00000465315 J3QL48 77 aa5.97□□□□□ -1.45
CCDC115-204ENST00000465315 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
CCDC115-204ENST00000465315 S4R3F8 94 aa5.96□□□□□ -1.46
CCDC115-204ENST00000465315 NDUFAF8A1L188 74 aa5.95□□□□□ -1.46
CCDC115-204ENST00000465315 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
CCDC115-204ENST00000465315 APOBP04114 4563 aaKnown RBP5.94□□□□□ -1.46
CCDC115-204ENST00000465315 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
CCDC115-204ENST00000465315 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
CCDC115-204ENST00000465315 ROMO1P60602 79 aa5.91□□□□□ -1.46
CCDC115-204ENST00000465315 XP32Q5T750 250 aa5.91□□□□□ -1.46
CCDC115-204ENST00000465315 EPPK1P58107 5090 aaKnown RBP5.9□□□□□ -1.47
CCDC115-204ENST00000465315 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
CCDC115-204ENST00000465315 KRTAP4-5Q9BYR2 181 aa5.86□□□□□ -1.47
CCDC115-204ENST00000465315 RYR1P21817 5038 aa5.84□□□□□ -1.47
CCDC115-204ENST00000465315 P0C880 135 aa5.83□□□□□ -1.48
CCDC115-204ENST00000465315 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
CCDC115-204ENST00000465315 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
CCDC115-204ENST00000465315 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
CCDC115-204ENST00000465315 HSPG2P98160 4391 aa5.78□□□□□ -1.48
CCDC115-204ENST00000465315 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
CCDC115-204ENST00000465315 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
CCDC115-204ENST00000465315 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
CCDC115-204ENST00000465315 KRTAP3-2Q9BYR7 98 aa5.68□□□□□ -1.5
CCDC115-204ENST00000465315 M0QZ58 72 aa5.68□□□□□ -1.5
CCDC115-204ENST00000465315 MT1HL1P0DM35 61 aa5.67□□□□□ -1.5
CCDC115-204ENST00000465315 HERC2O95714 4834 aa5.67□□□□□ -1.5
CCDC115-204ENST00000465315 R4GN34 69 aa5.66□□□□□ -1.5
CCDC115-204ENST00000465315 KRTAP12-2P59991 146 aa5.65□□□□□ -1.5
CCDC115-204ENST00000465315 LRP2P98164 4655 aa5.64□□□□□ -1.51
CCDC115-204ENST00000465315 BIRC6Q9NR09 4857 aa5.63□□□□□ -1.51
CCDC115-204ENST00000465315 CAMK2N1Q7Z7J9 78 aa5.62□□□□□ -1.51
CCDC115-204ENST00000465315 TPRXLQ17RH7 258 aa5.61□□□□□ -1.51
CCDC115-204ENST00000465315 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
CCDC115-204ENST00000465315 TNXBP22105 4242 aa5.58□□□□□ -1.52
CCDC115-204ENST00000465315 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
CCDC115-204ENST00000465315 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
CCDC115-204ENST00000465315 LPAP08519 4548 aa5.55□□□□□ -1.52
CCDC115-204ENST00000465315 LUZP6Q538Z0 58 aa5.55□□□□□ -1.52
CCDC115-204ENST00000465315 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
CCDC115-204ENST00000465315 HERC1Q15751 4861 aa5.41□□□□□ -1.54
CCDC115-204ENST00000465315 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
CCDC115-204ENST00000465315 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
CCDC115-204ENST00000465315 KRTAP4-1Q9BYQ7 146 aa5.34□□□□□ -1.56
CCDC115-204ENST00000465315 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
CCDC115-204ENST00000465315 M0R2T5 61 aa5.29□□□□□ -1.56
CCDC115-204ENST00000465315 MUC2Q02817 5179 aa5.26□□□□□ -1.57
CCDC115-204ENST00000465315 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
CCDC115-204ENST00000465315 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
CCDC115-204ENST00000465315 UBR4Q5T4S7 5183 aa5.13□□□□□ -1.59
CCDC115-204ENST00000465315 HMCN2Q8NDA2 5059 aa5.1□□□□□ -1.59
CCDC115-204ENST00000465315 TNP1P09430 55 aa5.1□□□□□ -1.59
CCDC115-204ENST00000465315 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
CCDC115-204ENST00000465315 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
CCDC115-204ENST00000465315 FAT4Q6V0I7 4981 aa5.03□□□□□ -1.6
CCDC115-204ENST00000465315 KRTAP10-10P60014 251 aa4.99□□□□□ -1.61
CCDC115-204ENST00000465315 KRTAP19-2Q3LHN2 52 aa4.98□□□□□ -1.61
CCDC115-204ENST00000465315 FLGP20930 4061 aaPredicted RBP4.89□□□□□ -1.63
CCDC115-204ENST00000465315 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.63
CCDC115-204ENST00000465315 MT1HP80294 61 aa4.8□□□□□ -1.64
CCDC115-204ENST00000465315 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
CCDC115-204ENST00000465315 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
CCDC115-204ENST00000465315 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
CCDC115-204ENST00000465315 MT1FP04733 61 aa4.74□□□□□ -1.65
CCDC115-204ENST00000465315 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
CCDC115-204ENST00000465315 MT2AP02795 61 aa4.72□□□□□ -1.65
CCDC115-204ENST00000465315 FSIP2Q5CZC0 6907 aa4.64□□□□□ -1.67
CCDC115-204ENST00000465315 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
CCDC115-204ENST00000465315 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
CCDC115-204ENST00000465315 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
CCDC115-204ENST00000465315 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
CCDC115-204ENST00000465315 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
CCDC115-204ENST00000465315 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
CCDC115-204ENST00000465315 MT1BP07438 61 aa4.5□□□□□ -1.69
CCDC115-204ENST00000465315 MT1XP80297 61 aa4.49□□□□□ -1.69
CCDC115-204ENST00000465315 KRTAP10-5P60370 271 aa4.49□□□□□ -1.69
CCDC115-204ENST00000465315 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
CCDC115-204ENST00000465315 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
CCDC115-204ENST00000465315 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
CCDC115-204ENST00000465315 LCE2AQ5TA79 106 aaPredicted RBP4.46□□□□□ -1.7
CCDC115-204ENST00000465315 USH2AO75445 5202 aa4.45□□□□□ -1.7
CCDC115-204ENST00000465315 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
CCDC115-204ENST00000465315 LCE2DQ5TA82 110 aaPredicted RBP4.44□□□□□ -1.7
CCDC115-204ENST00000465315 CRCT1Q9UGL9 99 aa4.41□□□□□ -1.7
CCDC115-204ENST00000465315 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
CCDC115-204ENST00000465315 KMT2DO14686 5537 aa4.36□□□□□ -1.71
CCDC115-204ENST00000465315 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.71
CCDC115-204ENST00000465315 LCE2BO14633 110 aa4.32□□□□□ -1.72
CCDC115-204ENST00000465315 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
CCDC115-204ENST00000465315 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
CCDC115-204ENST00000465315 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
CCDC115-204ENST00000465315 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
CCDC115-204ENST00000465315 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
CCDC115-204ENST00000465315 INE1O15225 51 aa4.13□□□□□ -1.75
CCDC115-204ENST00000465315 KRTAP4-7Q9BYR0 210 aa4.13□□□□□ -1.75
CCDC115-204ENST00000465315 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
CCDC115-204ENST00000465315 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
CCDC115-204ENST00000465315 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms