RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 DMBT1Q9UGM3 2413 aaPredicted RBP9.94□□□□□ -0.82
TSPAN4-210ENST00000464987 MYCBP2O75592 4640 aa9.93□□□□□ -0.82
TSPAN4-210ENST00000464987 KIAA1109Q2LD37 5005 aa9.89□□□□□ -0.83
TSPAN4-210ENST00000464987 UQCR11O14957 56 aa9.84□□□□□ -0.83
TSPAN4-210ENST00000464987 MIR22HGQ0VDD5 57 aa9.83□□□□□ -0.84
TSPAN4-210ENST00000464987 HERC2O95714 4834 aa9.82□□□□□ -0.84
TSPAN4-210ENST00000464987 COX6B2Q6YFQ2 88 aa9.76□□□□□ -0.85
TSPAN4-210ENST00000464987 XP32Q5T750 250 aa9.75□□□□□ -0.85
TSPAN4-210ENST00000464987 CSAG1Q6PB30 78 aa9.75□□□□□ -0.85
TSPAN4-210ENST00000464987 RPL37P61927 97 aaKnown RBP9.74□□□□□ -0.85
TSPAN4-210ENST00000464987 MT1HL1P0DM35 61 aa9.73□□□□□ -0.85
TSPAN4-210ENST00000464987 LPAP08519 4548 aa9.67□□□□□ -0.86
TSPAN4-210ENST00000464987 H0YAA0 97 aa9.63□□□□□ -0.87
TSPAN4-210ENST00000464987 KRTAP4-5Q9BYR2 181 aa9.61□□□□□ -0.87
TSPAN4-210ENST00000464987 LRP2P98164 4655 aa9.59□□□□□ -0.87
TSPAN4-210ENST00000464987 PCLOQ9Y6V0 5065 aa9.58□□□□□ -0.88
TSPAN4-210ENST00000464987 A0A1B0GU33 70 aa9.58□□□□□ -0.88
TSPAN4-210ENST00000464987 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
TSPAN4-210ENST00000464987 H1FX-AS1Q4G0G2 97 aa9.55□□□□□ -0.88
TSPAN4-210ENST00000464987 ABCA13Q86UQ4 5058 aa9.55□□□□□ -0.88
TSPAN4-210ENST00000464987 KRTAP25-1Q3LHN0 102 aa9.45□□□□□ -0.9
TSPAN4-210ENST00000464987 ROMO1P60602 79 aa9.44□□□□□ -0.9
TSPAN4-210ENST00000464987 S4R3F8 94 aa9.44□□□□□ -0.9
TSPAN4-210ENST00000464987 KRTAP10-6P60371 365 aaPredicted RBP9.42□□□□□ -0.9
TSPAN4-210ENST00000464987 TPRXLQ17RH7 258 aa9.4□□□□□ -0.91
TSPAN4-210ENST00000464987 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
TSPAN4-210ENST00000464987 KRTAP13-4Q3LI77 160 aa9.33□□□□□ -0.92
TSPAN4-210ENST00000464987 J3QL48 77 aa9.28□□□□□ -0.92
TSPAN4-210ENST00000464987 P0C880 135 aa9.28□□□□□ -0.92
TSPAN4-210ENST00000464987 A0A0D9SG42 100 aa9.21□□□□□ -0.94
TSPAN4-210ENST00000464987 MUC17Q685J3 4493 aa9.18□□□□□ -0.94
TSPAN4-210ENST00000464987 HERC1Q15751 4861 aa9.13□□□□□ -0.95
TSPAN4-210ENST00000464987 K7ERS5 55 aa9.13□□□□□ -0.95
TSPAN4-210ENST00000464987 KRTAP4-1Q9BYQ7 146 aa9.06□□□□□ -0.96
TSPAN4-210ENST00000464987 CRIPTQ9P021 101 aa9.05□□□□□ -0.96
TSPAN4-210ENST00000464987 SEC61BP60468 96 aaKnown RBP9.01□□□□□ -0.97
TSPAN4-210ENST00000464987 KRTAP12-2P59991 146 aa8.99□□□□□ -0.97
TSPAN4-210ENST00000464987 KRTAP12-1P59990 96 aa8.92□□□□□ -0.98
TSPAN4-210ENST00000464987 MUC2Q02817 5179 aa8.91□□□□□ -0.98
TSPAN4-210ENST00000464987 SPINT4Q6UDR6 99 aa8.89□□□□□ -0.99
TSPAN4-210ENST00000464987 M0QZ58 72 aa8.86□□□□□ -0.99
TSPAN4-210ENST00000464987 HMCN2Q8NDA2 5059 aa8.85□□□□□ -0.99
TSPAN4-210ENST00000464987 KRTAP19-2Q3LHN2 52 aa8.85□□□□□ -0.99
TSPAN4-210ENST00000464987 LORP23490 312 aaPredicted RBP8.81□□□□□ -1
TSPAN4-210ENST00000464987 KRTAP15-1Q3LI76 137 aa8.8□□□□□ -1
TSPAN4-210ENST00000464987 NDUFAF8A1L188 74 aa8.75□□□□□ -1.01
TSPAN4-210ENST00000464987 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
TSPAN4-210ENST00000464987 R4GN34 69 aa8.75□□□□□ -1.01
TSPAN4-210ENST00000464987 FLGP20930 4061 aaPredicted RBP8.67□□□□□ -1.02
TSPAN4-210ENST00000464987 UBR4Q5T4S7 5183 aa8.61□□□□□ -1.03
TSPAN4-210ENST00000464987 FAT4Q6V0I7 4981 aa8.48□□□□□ -1.05
TSPAN4-210ENST00000464987 A0A0A0MQY5 61 aa8.46□□□□□ -1.06
TSPAN4-210ENST00000464987 RNF213Q63HN8 5207 aa8.4□□□□□ -1.07
TSPAN4-210ENST00000464987 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
TSPAN4-210ENST00000464987 CAMK2N1Q7Z7J9 78 aa8.27□□□□□ -1.09
TSPAN4-210ENST00000464987 LUZP6Q538Z0 58 aa8.19□□□□□ -1.1
TSPAN4-210ENST00000464987 MT1HP80294 61 aa8.15□□□□□ -1.1
TSPAN4-210ENST00000464987 M0R2T5 61 aa8.13□□□□□ -1.11
TSPAN4-210ENST00000464987 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
TSPAN4-210ENST00000464987 LCE2DQ5TA82 110 aaPredicted RBP8.07□□□□□ -1.12
TSPAN4-210ENST00000464987 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
TSPAN4-210ENST00000464987 SPRR2GQ9BYE4 73 aa8.05□□□□□ -1.12
TSPAN4-210ENST00000464987 MT1FP04733 61 aa7.99□□□□□ -1.13
TSPAN4-210ENST00000464987 MT2AP02795 61 aa7.98□□□□□ -1.13
TSPAN4-210ENST00000464987 KRTAP9-8Q9BYQ0 159 aa7.95□□□□□ -1.14
TSPAN4-210ENST00000464987 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
TSPAN4-210ENST00000464987 PP632Q6XCG6 107 aa7.93□□□□□ -1.14
TSPAN4-210ENST00000464987 TNP1P09430 55 aa7.92□□□□□ -1.14
TSPAN4-210ENST00000464987 LCE2AQ5TA79 106 aaPredicted RBP7.88□□□□□ -1.15
TSPAN4-210ENST00000464987 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
TSPAN4-210ENST00000464987 KRTAP23-1A1A580 65 aa7.71□□□□□ -1.17
TSPAN4-210ENST00000464987 MT1BP07438 61 aa7.68□□□□□ -1.18
TSPAN4-210ENST00000464987 KRTAP9-3Q9BYQ3 159 aa7.62□□□□□ -1.19
TSPAN4-210ENST00000464987 LCE3AQ5TA76 89 aa7.61□□□□□ -1.19
TSPAN4-210ENST00000464987 KRTAP10-5P60370 271 aa7.59□□□□□ -1.19
TSPAN4-210ENST00000464987 KRTAP9-2Q9BYQ4 174 aa7.59□□□□□ -1.19
TSPAN4-210ENST00000464987 MT1XP80297 61 aa7.58□□□□□ -1.2
TSPAN4-210ENST00000464987 SPRR5A0A1B0GTR4 108 aa7.51□□□□□ -1.21
TSPAN4-210ENST00000464987 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
TSPAN4-210ENST00000464987 LCE2BO14633 110 aa7.37□□□□□ -1.23
TSPAN4-210ENST00000464987 USH2AO75445 5202 aa7.37□□□□□ -1.23
TSPAN4-210ENST00000464987 KRTAP8-1Q8IUC2 63 aa7.36□□□□□ -1.23
TSPAN4-210ENST00000464987 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
TSPAN4-210ENST00000464987 FSIP2Q5CZC0 6907 aa7.31□□□□□ -1.24
TSPAN4-210ENST00000464987 KRTAP9-6A0A140TA67 174 aa7.29□□□□□ -1.24
TSPAN4-210ENST00000464987 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
TSPAN4-210ENST00000464987 KRTAP12-3P60328 96 aa7.21□□□□□ -1.25
TSPAN4-210ENST00000464987 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
TSPAN4-210ENST00000464987 KMT2DO14686 5537 aa7.19□□□□□ -1.26
TSPAN4-210ENST00000464987 INE1O15225 51 aa7.09□□□□□ -1.27
TSPAN4-210ENST00000464987 KRTAP19-5Q3LI72 72 aa7.02□□□□□ -1.29
TSPAN4-210ENST00000464987 KRTAP4-8A0A0G2JLE6 195 aa7.01□□□□□ -1.29
TSPAN4-210ENST00000464987 KRTAP4-8Q9BYQ9 185 aa7.01□□□□□ -1.29
TSPAN4-210ENST00000464987 SSPOA2VEC9 5147 aa6.89□□□□□ -1.31
TSPAN4-210ENST00000464987 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
TSPAN4-210ENST00000464987 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
TSPAN4-210ENST00000464987 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
TSPAN4-210ENST00000464987 KRTAP19-6Q3LI70 58 aa6.73□□□□□ -1.33
TSPAN4-210ENST00000464987 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.69□□□□□ -1.34
TSPAN4-210ENST00000464987 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms