RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 A0A087WVE0 104 aa11.57□□□□□ -0.56
U2AF1-206ENST00000464750 HIST1H4AP62805 103 aaKnown RBP11.57□□□□□ -0.56
U2AF1-206ENST00000464750 A6NN06 94 aa11.55□□□□□ -0.56
U2AF1-206ENST00000464750 H3BS24 57 aa11.52□□□□□ -0.57
U2AF1-206ENST00000464750 UQCRQO14949 82 aa11.52□□□□□ -0.57
U2AF1-206ENST00000464750 H0Y9P7 68 aa11.5□□□□□ -0.57
U2AF1-206ENST00000464750 ATOX1O00244 68 aa11.47□□□□□ -0.57
U2AF1-206ENST00000464750 CRIPTQ9P021 101 aa11.41□□□□□ -0.58
U2AF1-206ENST00000464750 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
U2AF1-206ENST00000464750 KRTAP10-5P60370 271 aa11.38□□□□□ -0.59
U2AF1-206ENST00000464750 NDUFC1O43677 76 aa11.37□□□□□ -0.59
U2AF1-206ENST00000464750 LINC00643Q86TS7 51 aa11.37□□□□□ -0.59
U2AF1-206ENST00000464750 A8MUN3 132 aa11.3□□□□□ -0.6
U2AF1-206ENST00000464750 H0YAA0 97 aa11.29□□□□□ -0.6
U2AF1-206ENST00000464750 LINC00208Q96KT6 92 aa11.29□□□□□ -0.6
U2AF1-206ENST00000464750 NEBP20929 6669 aa11.28□□□□□ -0.6
U2AF1-206ENST00000464750 OCR1Q9BZK8 76 aa11.22□□□□□ -0.61
U2AF1-206ENST00000464750 MUC12Q9UKN1 5478 aa11.22□□□□□ -0.61
U2AF1-206ENST00000464750 MP68P56378 58 aa11.21□□□□□ -0.61
U2AF1-206ENST00000464750 ADM2Q7Z4H4 148 aa11.19□□□□□ -0.62
U2AF1-206ENST00000464750 A0A1B0GV90 55 aa11.17□□□□□ -0.62
U2AF1-206ENST00000464750 H3BPC8 53 aa11.02□□□□□ -0.65
U2AF1-206ENST00000464750 KRTAP5-9P26371 169 aa11.02□□□□□ -0.65
U2AF1-206ENST00000464750 J3QR89 54 aa10.99□□□□□ -0.65
U2AF1-206ENST00000464750 LOC100996750A0A140TA64 210 aa10.96□□□□□ -0.65
U2AF1-206ENST00000464750 DMAC1Q96GE9 116 aa10.96□□□□□ -0.65
U2AF1-206ENST00000464750 KRTAP4-6Q9BYQ5 205 aa10.96□□□□□ -0.65
U2AF1-206ENST00000464750 KMT2DO14686 5537 aa10.95□□□□□ -0.66
U2AF1-206ENST00000464750 SCGB1A1P11684 91 aa10.94□□□□□ -0.66
U2AF1-206ENST00000464750 P0C880 135 aa10.92□□□□□ -0.66
U2AF1-206ENST00000464750 PRO2289Q9P1D8 64 aa10.91□□□□□ -0.66
U2AF1-206ENST00000464750 R4GN34 69 aa10.91□□□□□ -0.66
U2AF1-206ENST00000464750 C20orf197Q8N268 126 aa10.9□□□□□ -0.66
U2AF1-206ENST00000464750 PLAC4Q8WY50 150 aa10.89□□□□□ -0.67
U2AF1-206ENST00000464750 MT1XP80297 61 aa10.88□□□□□ -0.67
U2AF1-206ENST00000464750 MDN1Q9NU22 5596 aa10.88□□□□□ -0.67
U2AF1-206ENST00000464750 M0QZ58 72 aa10.84□□□□□ -0.67
U2AF1-206ENST00000464750 KRTAP20-1Q3LI63 56 aa10.8□□□□□ -0.68
U2AF1-206ENST00000464750 TRAV7A0A075B6U4 112 aa10.71□□□□□ -0.69
U2AF1-206ENST00000464750 LINC01554Q52M75 96 aa10.69□□□□□ -0.7
U2AF1-206ENST00000464750 SPRR2FQ96RM1 72 aa10.68□□□□□ -0.7
U2AF1-206ENST00000464750 MT-ATP8P03928 68 aa10.64□□□□□ -0.71
U2AF1-206ENST00000464750 ACYP2P14621 99 aa10.64□□□□□ -0.71
U2AF1-206ENST00000464750 KRTAP12-2P59991 146 aa10.63□□□□□ -0.71
U2AF1-206ENST00000464750 KRTAP8-1Q8IUC2 63 aa10.61□□□□□ -0.71
U2AF1-206ENST00000464750 SMIM20Q8N5G0 67 aa10.6□□□□□ -0.71
U2AF1-206ENST00000464750 SPRR2EP22531 72 aa10.56□□□□□ -0.72
U2AF1-206ENST00000464750 SPRR2BP35325 72 aa10.56□□□□□ -0.72
U2AF1-206ENST00000464750 SPRR2AP35326 72 aa10.56□□□□□ -0.72
U2AF1-206ENST00000464750 SPTSSBQ8NFR3 76 aa10.55□□□□□ -0.72
U2AF1-206ENST00000464750 K7ERU9 68 aa10.51□□□□□ -0.73
U2AF1-206ENST00000464750 CHKB-CPT1BH3BT56 60 aa10.48□□□□□ -0.73
U2AF1-206ENST00000464750 KRTAP2-3P0C7H8 128 aa10.46□□□□□ -0.73
U2AF1-206ENST00000464750 KRTAP2-4Q9BYR9 128 aa10.46□□□□□ -0.73
U2AF1-206ENST00000464750 KRTAP4-8A0A0G2JLE6 195 aa10.44□□□□□ -0.74
U2AF1-206ENST00000464750 KRTAP4-8Q9BYQ9 185 aa10.44□□□□□ -0.74
U2AF1-206ENST00000464750 SNURFQ9Y675 71 aa10.43□□□□□ -0.74
U2AF1-206ENST00000464750 KRTAP10-7P60409 375 aaPredicted RBP10.39□□□□□ -0.75
U2AF1-206ENST00000464750 LCE1AQ5T7P2 110 aa10.39□□□□□ -0.75
U2AF1-206ENST00000464750 KRTAP10-12P60413 245 aa10.32□□□□□ -0.76
U2AF1-206ENST00000464750 SPANXA2-OT1Q8N9U9 137 aa10.29□□□□□ -0.76
U2AF1-206ENST00000464750 SPRR2DP22532 72 aa10.21□□□□□ -0.77
U2AF1-206ENST00000464750 SERP2Q8N6R1 65 aa10.2□□□□□ -0.78
U2AF1-206ENST00000464750 KRTAP13-4Q3LI77 160 aa10.17□□□□□ -0.78
U2AF1-206ENST00000464750 KRTAP4-12Q9BQ66 201 aa10.15□□□□□ -0.78
U2AF1-206ENST00000464750 KRTAP2-2Q9BYT5 123 aa10.13□□□□□ -0.79
U2AF1-206ENST00000464750 KRTAP2-1Q9BYU5 128 aa10.13□□□□□ -0.79
U2AF1-206ENST00000464750 KRTAP19-4Q3LI73 84 aa10.05□□□□□ -0.8
U2AF1-206ENST00000464750 COA5Q86WW8 74 aa10.04□□□□□ -0.8
U2AF1-206ENST00000464750 CAMK2N1Q7Z7J9 78 aa10.03□□□□□ -0.8
U2AF1-206ENST00000464750 LCE3BQ5TA77 95 aa9.93□□□□□ -0.82
U2AF1-206ENST00000464750 SEC61GP60059 68 aa9.89□□□□□ -0.83
U2AF1-206ENST00000464750 SERP1Q9Y6X1 66 aa9.88□□□□□ -0.83
U2AF1-206ENST00000464750 COX7CP15954 63 aa9.85□□□□□ -0.83
U2AF1-206ENST00000464750 A0A0D9SG42 100 aa9.84□□□□□ -0.83
U2AF1-206ENST00000464750 SPATA8Q6RVD6 105 aa9.79□□□□□ -0.84
U2AF1-206ENST00000464750 H7BZZ5 65 aa9.74□□□□□ -0.85
U2AF1-206ENST00000464750 CYSTM1Q9H1C7 97 aa9.74□□□□□ -0.85
U2AF1-206ENST00000464750 A0A1B0GU33 70 aa9.73□□□□□ -0.85
U2AF1-206ENST00000464750 KRTAP19-7Q3SYF9 63 aa9.73□□□□□ -0.85
U2AF1-206ENST00000464750 SPINT4Q6UDR6 99 aa9.71□□□□□ -0.86
U2AF1-206ENST00000464750 LCE4AQ5TA78 99 aa9.68□□□□□ -0.86
U2AF1-206ENST00000464750 MT1EP04732 61 aa9.66□□□□□ -0.86
U2AF1-206ENST00000464750 KRTAP9-9Q9BYP9 154 aa9.65□□□□□ -0.86
U2AF1-206ENST00000464750 KRTAP9-4Q9BYQ2 154 aa9.65□□□□□ -0.86
U2AF1-206ENST00000464750 KRTAP12-1P59990 96 aa9.63□□□□□ -0.87
U2AF1-206ENST00000464750 LCE5AQ5TCM9 118 aa9.62□□□□□ -0.87
U2AF1-206ENST00000464750 KRTAP19-3Q7Z4W3 81 aa9.59□□□□□ -0.87
U2AF1-206ENST00000464750 A0A1B0GU69 56 aa9.53□□□□□ -0.88
U2AF1-206ENST00000464750 DSTQ03001 7570 aaKnown RBP9.51□□□□□ -0.89
U2AF1-206ENST00000464750 KRTAP23-1A1A580 65 aa9.47□□□□□ -0.89
U2AF1-206ENST00000464750 SMIM26A0A096LP01 95 aa9.46□□□□□ -0.9
U2AF1-206ENST00000464750 KRTAP19-5Q3LI72 72 aa9.46□□□□□ -0.9
U2AF1-206ENST00000464750 ANAPC13Q9BS18 74 aa9.43□□□□□ -0.9
U2AF1-206ENST00000464750 A8MU10 97 aa9.41□□□□□ -0.9
U2AF1-206ENST00000464750 MT1GP13640 62 aa9.33□□□□□ -0.92
U2AF1-206ENST00000464750 PP632Q6XCG6 107 aa9.27□□□□□ -0.93
U2AF1-206ENST00000464750 LCE1DQ5T752 114 aa9.26□□□□□ -0.93
U2AF1-206ENST00000464750 KRTAP4-9Q9BYQ8 210 aa9.26□□□□□ -0.93
U2AF1-206ENST00000464750 CCDC179H3BU77 68 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms