RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 A0A1B0GU33 70 aa6.41□□□□□ -1.38
TNRC6A-205ENST00000464539 SPINK1P00995 79 aa6.41□□□□□ -1.38
TNRC6A-205ENST00000464539 K7ERS5 55 aa6.39□□□□□ -1.39
TNRC6A-205ENST00000464539 SMR3BP02814 79 aaPredicted RBP6.37□□□□□ -1.39
TNRC6A-205ENST00000464539 H1FX-AS1Q4G0G2 97 aa6.37□□□□□ -1.39
TNRC6A-205ENST00000464539 VPS13BQ7Z7G8 4022 aa6.36□□□□□ -1.39
TNRC6A-205ENST00000464539 KRTAP13-2Q52LG2 175 aa6.35□□□□□ -1.39
TNRC6A-205ENST00000464539 KRTAP10-1P60331 282 aa6.34□□□□□ -1.39
TNRC6A-205ENST00000464539 FAT1Q14517 4588 aa6.33□□□□□ -1.4
TNRC6A-205ENST00000464539 HMCN2Q8NDA2 5059 aa6.31□□□□□ -1.4
TNRC6A-205ENST00000464539 TYMSOSQ8TAI1 123 aa6.31□□□□□ -1.4
TNRC6A-205ENST00000464539 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
TNRC6A-205ENST00000464539 P0C880 135 aa6.26□□□□□ -1.41
TNRC6A-205ENST00000464539 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
TNRC6A-205ENST00000464539 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
TNRC6A-205ENST00000464539 KRTAP3-1Q9BYR8 98 aa6.19□□□□□ -1.42
TNRC6A-205ENST00000464539 COX6B2Q6YFQ2 88 aa6.19□□□□□ -1.42
TNRC6A-205ENST00000464539 LCE2BO14633 110 aa6.18□□□□□ -1.42
TNRC6A-205ENST00000464539 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
TNRC6A-205ENST00000464539 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
TNRC6A-205ENST00000464539 RPL37P61927 97 aaKnown RBP6.15□□□□□ -1.42
TNRC6A-205ENST00000464539 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
TNRC6A-205ENST00000464539 KRTAP10-4P60372 401 aaPredicted RBP6.12□□□□□ -1.43
TNRC6A-205ENST00000464539 LCE2CQ5TA81 110 aa6.12□□□□□ -1.43
TNRC6A-205ENST00000464539 LRP1Q07954 4544 aaKnown RBP6.11□□□□□ -1.43
TNRC6A-205ENST00000464539 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
TNRC6A-205ENST00000464539 LCE2AQ5TA79 106 aaPredicted RBP6.08□□□□□ -1.44
TNRC6A-205ENST00000464539 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
TNRC6A-205ENST00000464539 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
TNRC6A-205ENST00000464539 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
TNRC6A-205ENST00000464539 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
TNRC6A-205ENST00000464539 FAT3Q8TDW7 4589 aa6.05□□□□□ -1.44
TNRC6A-205ENST00000464539 LRP2P98164 4655 aa6.03□□□□□ -1.44
TNRC6A-205ENST00000464539 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.44
TNRC6A-205ENST00000464539 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
TNRC6A-205ENST00000464539 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
TNRC6A-205ENST00000464539 NDUFAF8A1L188 74 aa6□□□□□ -1.45
TNRC6A-205ENST00000464539 C9orf92A6NGG3 77 aa5.98□□□□□ -1.45
TNRC6A-205ENST00000464539 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
TNRC6A-205ENST00000464539 A0A0D9SG42 100 aa5.93□□□□□ -1.46
TNRC6A-205ENST00000464539 TNXBP22105 4242 aa5.92□□□□□ -1.46
TNRC6A-205ENST00000464539 C10orf95Q9H7T3 257 aa5.91□□□□□ -1.46
TNRC6A-205ENST00000464539 S4R3F8 94 aa5.91□□□□□ -1.46
TNRC6A-205ENST00000464539 A0A0A0MQY5 61 aa5.9□□□□□ -1.47
TNRC6A-205ENST00000464539 LORP23490 312 aaPredicted RBP5.89□□□□□ -1.47
TNRC6A-205ENST00000464539 XP32Q5T750 250 aa5.83□□□□□ -1.48
TNRC6A-205ENST00000464539 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
TNRC6A-205ENST00000464539 KRTAP10-8P60410 259 aa5.81□□□□□ -1.48
TNRC6A-205ENST00000464539 KRTAP12-1P59990 96 aa5.79□□□□□ -1.48
TNRC6A-205ENST00000464539 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
TNRC6A-205ENST00000464539 M0QZ58 72 aa5.75□□□□□ -1.49
TNRC6A-205ENST00000464539 LPAP08519 4548 aa5.69□□□□□ -1.5
TNRC6A-205ENST00000464539 MUC2Q02817 5179 aa5.67□□□□□ -1.5
TNRC6A-205ENST00000464539 CRCT1Q9UGL9 99 aa5.66□□□□□ -1.5
TNRC6A-205ENST00000464539 LUZP6Q538Z0 58 aa5.63□□□□□ -1.51
TNRC6A-205ENST00000464539 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
TNRC6A-205ENST00000464539 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
TNRC6A-205ENST00000464539 FSIP2Q5CZC0 6907 aa5.52□□□□□ -1.53
TNRC6A-205ENST00000464539 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
TNRC6A-205ENST00000464539 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
TNRC6A-205ENST00000464539 R4GN34 69 aa5.43□□□□□ -1.54
TNRC6A-205ENST00000464539 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
TNRC6A-205ENST00000464539 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
TNRC6A-205ENST00000464539 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
TNRC6A-205ENST00000464539 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
TNRC6A-205ENST00000464539 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
TNRC6A-205ENST00000464539 MT1HP80294 61 aa5.2□□□□□ -1.58
TNRC6A-205ENST00000464539 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
TNRC6A-205ENST00000464539 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
TNRC6A-205ENST00000464539 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
TNRC6A-205ENST00000464539 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
TNRC6A-205ENST00000464539 TNP1P09430 55 aa5.11□□□□□ -1.59
TNRC6A-205ENST00000464539 M0R2T5 61 aa5.09□□□□□ -1.6
TNRC6A-205ENST00000464539 PRO2289Q9P1D8 64 aa5.06□□□□□ -1.6
TNRC6A-205ENST00000464539 INE1O15225 51 aa4.98□□□□□ -1.61
TNRC6A-205ENST00000464539 SSPOA2VEC9 5147 aa4.93□□□□□ -1.62
TNRC6A-205ENST00000464539 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
TNRC6A-205ENST00000464539 USH2AO75445 5202 aa4.91□□□□□ -1.62
TNRC6A-205ENST00000464539 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
TNRC6A-205ENST00000464539 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
TNRC6A-205ENST00000464539 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
TNRC6A-205ENST00000464539 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
TNRC6A-205ENST00000464539 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
TNRC6A-205ENST00000464539 KRTAP6-3Q3LI67 103 aa4.8□□□□□ -1.64
TNRC6A-205ENST00000464539 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
TNRC6A-205ENST00000464539 MT2AP02795 61 aa4.73□□□□□ -1.65
TNRC6A-205ENST00000464539 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.66
TNRC6A-205ENST00000464539 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
TNRC6A-205ENST00000464539 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
TNRC6A-205ENST00000464539 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
TNRC6A-205ENST00000464539 MT1FP04733 61 aa4.69□□□□□ -1.66
TNRC6A-205ENST00000464539 KRTAP8-1Q8IUC2 63 aa4.68□□□□□ -1.66
TNRC6A-205ENST00000464539 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
TNRC6A-205ENST00000464539 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
TNRC6A-205ENST00000464539 NEBP20929 6669 aa4.66□□□□□ -1.66
TNRC6A-205ENST00000464539 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
TNRC6A-205ENST00000464539 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
TNRC6A-205ENST00000464539 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
TNRC6A-205ENST00000464539 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
TNRC6A-205ENST00000464539 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms