RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PRR15Q8IV56 129 aa1.89□□□□□ -2.11
SCFD1-204ENST00000463622 UBL5Q9BZL1 73 aa1.89□□□□□ -2.11
SCFD1-204ENST00000463622 ACYP1P07311 99 aa1.88□□□□□ -2.11
SCFD1-204ENST00000463622 C8orf17Q9NRJ1 99 aa1.88□□□□□ -2.11
SCFD1-204ENST00000463622 K7ERU9 68 aa1.87□□□□□ -2.11
SCFD1-204ENST00000463622 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
SCFD1-204ENST00000463622 LINC00643Q86TS7 51 aa1.87□□□□□ -2.11
SCFD1-204ENST00000463622 WFDC13Q8IUB5 93 aa1.87□□□□□ -2.11
SCFD1-204ENST00000463622 J3KT08 172 aa1.87□□□□□ -2.11
SCFD1-204ENST00000463622 SYNE2Q8WXH0 6885 aaKnown RBP1.87□□□□□ -2.11
SCFD1-204ENST00000463622 A8MUU9 505 aa1.86□□□□□ -2.11
SCFD1-204ENST00000463622 J3QR89 54 aa1.86□□□□□ -2.11
SCFD1-204ENST00000463622 LINC00313P59037 77 aa1.86□□□□□ -2.11
SCFD1-204ENST00000463622 RPL37P61927 97 aaKnown RBP1.86□□□□□ -2.11
SCFD1-204ENST00000463622 CXCL6P80162 114 aa1.86□□□□□ -2.11
SCFD1-204ENST00000463622 C20orf166-AS1Q96NR2 134 aa1.86□□□□□ -2.11
SCFD1-204ENST00000463622 FLGP20930 4061 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-204ENST00000463622 MACF1Q9UPN3 7388 aaKnown RBP1.86□□□□□ -2.11
SCFD1-204ENST00000463622 M0R2T5 61 aa1.85□□□□□ -2.11
SCFD1-204ENST00000463622 HIST1H4AP62805 103 aaKnown RBP1.85□□□□□ -2.11
SCFD1-204ENST00000463622 PCOTHQ58A44 107 aa1.85□□□□□ -2.11
SCFD1-204ENST00000463622 Q5W150 140 aa1.85□□□□□ -2.11
SCFD1-204ENST00000463622 hDV103S1A0JD37 113 aa1.85□□□□□ -2.11
SCFD1-204ENST00000463622 HCG22E2RYF7 251 aa1.85□□□□□ -2.11
SCFD1-204ENST00000463622 C8orf87E5RJ46 101 aa1.85□□□□□ -2.11
SCFD1-204ENST00000463622 CASC2Q6XLA1 102 aa1.85□□□□□ -2.11
SCFD1-204ENST00000463622 MRPL34Q9BQ48 92 aaKnown RBP1.85□□□□□ -2.11
SCFD1-204ENST00000463622 NDUFB1O75438 58 aa1.84□□□□□ -2.11
SCFD1-204ENST00000463622 ATP5EP2Q5VTU8 51 aa1.84□□□□□ -2.11
SCFD1-204ENST00000463622 TMEM254Q8TBM7 123 aa1.84□□□□□ -2.11
SCFD1-204ENST00000463622 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
SCFD1-204ENST00000463622 FAM236AA0A1B0GUQ0 79 aa1.81□□□□□ -2.12
SCFD1-204ENST00000463622 FAM236BA0A1B0GV22 79 aa1.81□□□□□ -2.12
SCFD1-204ENST00000463622 NDUFS5O43920 106 aa1.81□□□□□ -2.12
SCFD1-204ENST00000463622 ZCCHC13Q8WW36 166 aaKnown RBP1.81□□□□□ -2.12
SCFD1-204ENST00000463622 COX6B2Q6YFQ2 88 aa1.81□□□□□ -2.12
SCFD1-204ENST00000463622 HRES1P13985 223 aa1.8□□□□□ -2.12
SCFD1-204ENST00000463622 NEBP20929 6669 aa1.8□□□□□ -2.12
SCFD1-204ENST00000463622 KRTAP19-6Q3LI70 58 aa1.8□□□□□ -2.12
SCFD1-204ENST00000463622 IMUPQ9GZP8 106 aa1.8□□□□□ -2.12
SCFD1-204ENST00000463622 SPINK7P58062 85 aa1.79□□□□□ -2.12
SCFD1-204ENST00000463622 ATP11AUNQ6ZP68 121 aa1.79□□□□□ -2.12
SCFD1-204ENST00000463622 MT2AP02795 61 aa1.78□□□□□ -2.12
SCFD1-204ENST00000463622 CYSTM1Q9H1C7 97 aa1.78□□□□□ -2.12
SCFD1-204ENST00000463622 H0Y9P7 68 aa1.78□□□□□ -2.13
SCFD1-204ENST00000463622 TRAV22A0A0B4J277 110 aa1.77□□□□□ -2.13
SCFD1-204ENST00000463622 UQCRQO14949 82 aa1.77□□□□□ -2.13
SCFD1-204ENST00000463622 KLKP1Q107X0 134 aa1.77□□□□□ -2.13
SCFD1-204ENST00000463622 MT1FP04733 61 aa1.76□□□□□ -2.13
SCFD1-204ENST00000463622 SCGB1A1P11684 91 aa1.76□□□□□ -2.13
SCFD1-204ENST00000463622 LINC00208Q96KT6 92 aa1.76□□□□□ -2.13
SCFD1-204ENST00000463622 CYP4F30PQ9H0H9 118 aa1.76□□□□□ -2.13
SCFD1-204ENST00000463622 TP53AIP1Q9HCN2 124 aa1.76□□□□□ -2.13
SCFD1-204ENST00000463622 TRAV7A0A075B6U4 112 aa1.76□□□□□ -2.13
SCFD1-204ENST00000463622 C4orf26Q17RF5 130 aa1.76□□□□□ -2.13
SCFD1-204ENST00000463622 KRTAP20-1Q3LI63 56 aa1.76□□□□□ -2.13
SCFD1-204ENST00000463622 SNURFQ9Y675 71 aa1.76□□□□□ -2.13
SCFD1-204ENST00000463622 ATOX1O00244 68 aa1.75□□□□□ -2.13
SCFD1-204ENST00000463622 C7orf65Q6ZTY9 151 aa1.75□□□□□ -2.13
SCFD1-204ENST00000463622 C1orf64Q8NEQ6 169 aa1.75□□□□□ -2.13
SCFD1-204ENST00000463622 CCDC179H3BU77 68 aa1.74□□□□□ -2.13
SCFD1-204ENST00000463622 C20orf197Q8N268 126 aa1.74□□□□□ -2.13
SCFD1-204ENST00000463622 SERP2Q8N6R1 65 aa1.74□□□□□ -2.13
SCFD1-204ENST00000463622 MUC12Q9UKN1 5478 aa1.74□□□□□ -2.13
SCFD1-204ENST00000463622 LOC101927531A0A1B0GV80 90 aa1.73□□□□□ -2.13
SCFD1-204ENST00000463622 COX7CP15954 63 aa1.73□□□□□ -2.13
SCFD1-204ENST00000463622 KRTAP10-10P60014 251 aa1.73□□□□□ -2.13
SCFD1-204ENST00000463622 C5orf47Q569G3 176 aa1.73□□□□□ -2.13
SCFD1-204ENST00000463622 ANAPC13Q9BS18 74 aa1.73□□□□□ -2.13
SCFD1-204ENST00000463622 MP68P56378 58 aa1.72□□□□□ -2.13
SCFD1-204ENST00000463622 KMT2DO14686 5537 aa1.71□□□□□ -2.13
SCFD1-204ENST00000463622 SMIM20Q8N5G0 67 aa1.71□□□□□ -2.14
SCFD1-204ENST00000463622 FAM236DA0A1B0GTK5 79 aa1.7□□□□□ -2.14
SCFD1-204ENST00000463622 H3BPC8 53 aa1.7□□□□□ -2.14
SCFD1-204ENST00000463622 H7BZZ5 65 aa1.7□□□□□ -2.14
SCFD1-204ENST00000463622 FAM236CP0DP71 79 aa1.7□□□□□ -2.14
SCFD1-204ENST00000463622 RBM12B-AS1Q9P1G2 102 aa1.7□□□□□ -2.14
SCFD1-204ENST00000463622 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
SCFD1-204ENST00000463622 LCA10Q71F78 164 aa1.69□□□□□ -2.14
SCFD1-204ENST00000463622 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
SCFD1-204ENST00000463622 KRTAP2-3P0C7H8 128 aa1.68□□□□□ -2.14
SCFD1-204ENST00000463622 DMAC1Q96GE9 116 aa1.68□□□□□ -2.14
SCFD1-204ENST00000463622 KRTAP2-4Q9BYR9 128 aa1.68□□□□□ -2.14
SCFD1-204ENST00000463622 S4R3F8 94 aa1.66□□□□□ -2.14
SCFD1-204ENST00000463622 SPANXA2-OT1Q8N9U9 137 aa1.66□□□□□ -2.14
SCFD1-204ENST00000463622 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.14
SCFD1-204ENST00000463622 COA5Q86WW8 74 aa1.64□□□□□ -2.15
SCFD1-204ENST00000463622 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
SCFD1-204ENST00000463622 A8MUN3 132 aa1.64□□□□□ -2.15
SCFD1-204ENST00000463622 NDUFC1O43677 76 aa1.63□□□□□ -2.15
SCFD1-204ENST00000463622 ACYP2P14621 99 aa1.62□□□□□ -2.15
SCFD1-204ENST00000463622 KRTAP2-1Q9BYU5 128 aa1.62□□□□□ -2.15
SCFD1-204ENST00000463622 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-204ENST00000463622 P0C880 135 aa1.62□□□□□ -2.15
SCFD1-204ENST00000463622 TMEM258P61165 79 aa1.62□□□□□ -2.15
SCFD1-204ENST00000463622 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
SCFD1-204ENST00000463622 CSAG1Q6PB30 78 aa1.61□□□□□ -2.15
SCFD1-204ENST00000463622 A6NN06 94 aa1.6□□□□□ -2.15
SCFD1-204ENST00000463622 ADM2Q7Z4H4 148 aa1.6□□□□□ -2.15
SCFD1-204ENST00000463622 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms