RNA–Protein interactions for RNA: ENST00000463599.5

U2AF1-205, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-205ENST00000463599 DMXL1Q9Y485 3027 aa1.09□□□□□ -2.23
U2AF1-205ENST00000463599 UBR4Q5T4S7 5183 aa1.09□□□□□ -2.23
U2AF1-205ENST00000463599 PRKDCP78527 4128 aaKnown RBP1.09□□□□□ -2.23
U2AF1-205ENST00000463599 ANK2Q01484 3957 aa1.09□□□□□ -2.23
U2AF1-205ENST00000463599 RELNP78509 3460 aa1.09□□□□□ -2.23
U2AF1-205ENST00000463599 ZANQ9Y493 2812 aa1.09□□□□□ -2.24
U2AF1-205ENST00000463599 NBEAL2Q6ZNJ1 2754 aa1.08□□□□□ -2.24
U2AF1-205ENST00000463599 ACACBO00763 2458 aa1.08□□□□□ -2.24
U2AF1-205ENST00000463599 GPR98Q8WXG9 6306 aa1.07□□□□□ -2.24
U2AF1-205ENST00000463599 HIVEP1P15822 2718 aa1.07□□□□□ -2.24
U2AF1-205ENST00000463599 TGP01266 2768 aa1.07□□□□□ -2.24
U2AF1-205ENST00000463599 DYNC2H1Q8NCM8 4307 aaKnown RBP1.07□□□□□ -2.24
U2AF1-205ENST00000463599 MXRA5Q9NR99 2828 aa1.07□□□□□ -2.24
U2AF1-205ENST00000463599 CENPEQ02224 2701 aa1.07□□□□□ -2.24
U2AF1-205ENST00000463599 HTTP42858 3142 aa1.06□□□□□ -2.24
U2AF1-205ENST00000463599 USP9XQ93008 2570 aaPredicted RBP1.06□□□□□ -2.24
U2AF1-205ENST00000463599 STAB1Q9NY15 2570 aa1.06□□□□□ -2.24
U2AF1-205ENST00000463599 DNAH8Q96JB1 4490 aa1.06□□□□□ -2.24
U2AF1-205ENST00000463599 TNXBP22105 4242 aa1.06□□□□□ -2.24
U2AF1-205ENST00000463599 HRNRQ86YZ3 2850 aaPredicted RBP1.06□□□□□ -2.24
U2AF1-205ENST00000463599 DNAH3Q8TD57 4116 aa1.05□□□□□ -2.24
U2AF1-205ENST00000463599 MKI67P46013 3256 aaKnown RBP1.05□□□□□ -2.24
U2AF1-205ENST00000463599 ZFYVE26Q68DK2 2539 aa1.05□□□□□ -2.24
U2AF1-205ENST00000463599 SMG1Q96Q15 3661 aaKnown RBP1.04□□□□□ -2.24
U2AF1-205ENST00000463599 ITPR2Q14571 2701 aa1.04□□□□□ -2.24
U2AF1-205ENST00000463599 MYO18BQ8IUG5 2567 aa1.04□□□□□ -2.24
U2AF1-205ENST00000463599 FAT2Q9NYQ8 4349 aa1.04□□□□□ -2.24
U2AF1-205ENST00000463599 FLNBO75369 2602 aaKnown RBP1.03□□□□□ -2.24
U2AF1-205ENST00000463599 TLN2Q9Y4G6 2542 aa1.03□□□□□ -2.24
U2AF1-205ENST00000463599 DEFB4AO15263 64 aa1.03□□□□□ -2.24
U2AF1-205ENST00000463599 TEP1Q99973 2627 aaKnown RBP1.03□□□□□ -2.24
U2AF1-205ENST00000463599 SZT2Q5T011 3432 aa1.02□□□□□ -2.25
U2AF1-205ENST00000463599 LAMA5O15230 3695 aa1.02□□□□□ -2.25
U2AF1-205ENST00000463599 SMR3BP02814 79 aaPredicted RBP1.02□□□□□ -2.25
U2AF1-205ENST00000463599 TEX15Q9BXT5 2789 aa1.02□□□□□ -2.25
U2AF1-205ENST00000463599 DMDP11532 3685 aa1.02□□□□□ -2.25
U2AF1-205ENST00000463599 CSMD1Q96PZ7 3565 aa1.01□□□□□ -2.25
U2AF1-205ENST00000463599 KALRNO60229 2985 aa1.01□□□□□ -2.25
U2AF1-205ENST00000463599 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
U2AF1-205ENST00000463599 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
U2AF1-205ENST00000463599 DNAH7Q8WXX0 4024 aa1.01□□□□□ -2.25
U2AF1-205ENST00000463599 FREM2Q5SZK8 3169 aa1□□□□□ -2.25
U2AF1-205ENST00000463599 WDFY4Q6ZS81 3184 aa1□□□□□ -2.25
U2AF1-205ENST00000463599 TENM3Q9P273 2699 aa1□□□□□ -2.25
U2AF1-205ENST00000463599 LAMA3Q16787 3333 aa1□□□□□ -2.25
U2AF1-205ENST00000463599 CUBNO60494 3623 aa1□□□□□ -2.25
U2AF1-205ENST00000463599 FLNAP21333 2647 aaKnown RBP1□□□□□ -2.25
U2AF1-205ENST00000463599 DOPEY1Q5JWR5 2465 aa0.99□□□□□ -2.25
U2AF1-205ENST00000463599 ANK3Q12955 4377 aaKnown RBP0.99□□□□□ -2.25
U2AF1-205ENST00000463599 MT1AP04731 61 aa0.99□□□□□ -2.25
U2AF1-205ENST00000463599 DCHS1Q96JQ0 3298 aa0.99□□□□□ -2.25
U2AF1-205ENST00000463599 DNAH2Q9P225 4427 aa0.99□□□□□ -2.25
U2AF1-205ENST00000463599 PKHD1L1Q86WI1 4243 aa0.99□□□□□ -2.25
U2AF1-205ENST00000463599 NBEAL1Q6ZS30 2694 aa0.99□□□□□ -2.25
U2AF1-205ENST00000463599 VPS13AQ96RL7 3174 aa0.98□□□□□ -2.25
U2AF1-205ENST00000463599 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
U2AF1-205ENST00000463599 SPTBN5Q9NRC6 3674 aaKnown RBP0.97□□□□□ -2.25
U2AF1-205ENST00000463599 SRCAPQ6ZRS2 3230 aa0.97□□□□□ -2.25
U2AF1-205ENST00000463599 CEP295Q9C0D2 2601 aa0.97□□□□□ -2.25
U2AF1-205ENST00000463599 SPRR2DP22532 72 aa0.96□□□□□ -2.26
U2AF1-205ENST00000463599 SPRR2BP35325 72 aa0.96□□□□□ -2.26
U2AF1-205ENST00000463599 HECTD4Q9Y4D8 3996 aa0.96□□□□□ -2.26
U2AF1-205ENST00000463599 CFAP47Q6ZTR5 3102 aa0.96□□□□□ -2.26
U2AF1-205ENST00000463599 SVEP1Q4LDE5 3571 aa0.96□□□□□ -2.26
U2AF1-205ENST00000463599 ADGRG4Q8IZF6 3080 aa0.95□□□□□ -2.26
U2AF1-205ENST00000463599 LAMA1P25391 3075 aa0.95□□□□□ -2.26
U2AF1-205ENST00000463599 FASNP49327 2511 aaKnown RBP0.94□□□□□ -2.26
U2AF1-205ENST00000463599 KIAA1109Q2LD37 5005 aa0.94□□□□□ -2.26
U2AF1-205ENST00000463599 KRTAP19-5Q3LI72 72 aa0.94□□□□□ -2.26
U2AF1-205ENST00000463599 FRAS1Q86XX4 4008 aa0.94□□□□□ -2.26
U2AF1-205ENST00000463599 DNAH10Q8IVF4 4471 aa0.94□□□□□ -2.26
U2AF1-205ENST00000463599 XIRP2A4UGR9 3374 aa0.93□□□□□ -2.26
U2AF1-205ENST00000463599 PCLOQ9Y6V0 5065 aa0.93□□□□□ -2.26
U2AF1-205ENST00000463599 PKD1P98161 4303 aa0.93□□□□□ -2.26
U2AF1-205ENST00000463599 SPRR2AP35326 72 aa0.93□□□□□ -2.26
U2AF1-205ENST00000463599 HUWE1Q7Z6Z7 4374 aaKnown RBP0.93□□□□□ -2.26
U2AF1-205ENST00000463599 TLN1Q9Y490 2541 aaKnown RBP0.93□□□□□ -2.26
U2AF1-205ENST00000463599 MUC3AQ02505 3323 aa0.92□□□□□ -2.26
U2AF1-205ENST00000463599 SPTAN1Q13813 2472 aaKnown RBP0.92□□□□□ -2.26
U2AF1-205ENST00000463599 DNAH6Q9C0G6 4158 aa0.92□□□□□ -2.26
U2AF1-205ENST00000463599 MUC2Q02817 5179 aa0.92□□□□□ -2.26
U2AF1-205ENST00000463599 DNAH1Q9P2D7 4330 aa0.91□□□□□ -2.26
U2AF1-205ENST00000463599 CMYA5Q8N3K9 4069 aa0.91□□□□□ -2.26
U2AF1-205ENST00000463599 MGAM2Q2M2H8 2515 aa0.91□□□□□ -2.26
U2AF1-205ENST00000463599 HSPG2P98160 4391 aa0.91□□□□□ -2.26
U2AF1-205ENST00000463599 MACF1Q9UPN3 7388 aaKnown RBP0.9□□□□□ -2.26
U2AF1-205ENST00000463599 UTRNP46939 3433 aa0.9□□□□□ -2.27
U2AF1-205ENST00000463599 CSMD2Q7Z408 3487 aa0.9□□□□□ -2.27
U2AF1-205ENST00000463599 LOC400499M0QZD8 3231 aa0.9□□□□□ -2.27
U2AF1-205ENST00000463599 GOLGB1Q14789 3259 aaKnown RBP0.9□□□□□ -2.27
U2AF1-205ENST00000463599 STAB2Q8WWQ8 2551 aa0.89□□□□□ -2.27
U2AF1-205ENST00000463599 TRRAPQ9Y4A5 3859 aa0.89□□□□□ -2.27
U2AF1-205ENST00000463599 EP400Q96L91 3159 aa0.89□□□□□ -2.27
U2AF1-205ENST00000463599 LAMA2P24043 3122 aaKnown RBP0.89□□□□□ -2.27
U2AF1-205ENST00000463599 SPEGQ15772 3267 aa0.88□□□□□ -2.27
U2AF1-205ENST00000463599 MAST4O15021 2626 aa0.87□□□□□ -2.27
U2AF1-205ENST00000463599 USP34Q70CQ2 3546 aa0.87□□□□□ -2.27
U2AF1-205ENST00000463599 KRTAP6-2Q3LI66 62 aa0.87□□□□□ -2.27
U2AF1-205ENST00000463599 FAT3Q8TDW7 4589 aa0.87□□□□□ -2.27
U2AF1-205ENST00000463599 SPRR2FQ96RM1 72 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms